RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 KANSL2Q9H9L4 492 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 CFLARO15519 480 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 CA4P22748 312 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 EPHA10Q5JZY3 1008 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 BHMT2Q9H2M3 363 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 XAB2Q9HCS7 855 aaKnown RBP18.99■□□□□ 0.63
NPHP4-209ENST00000489180 NCK2O43639 380 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 CYP2D6P10635 497 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 STAT2P52630 851 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 PPME1Q9Y570 386 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 ATP7BP35670 1465 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 hCG_1984214I3L0E3 225 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 ANKRD20A4Q4UJ75 823 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 ANKRD20A8PQ5CZ79 823 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 ANKRD20A2Q5SQ80 823 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 ANKRD20A1Q5TYW2 823 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 ZNF713Q8N859 430 aaPredicted RBP18.99■□□□□ 0.63
NPHP4-209ENST00000489180 CPVLQ9H3G5 476 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 PFDN1O60925 122 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 CDK8P49336 464 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 CUL1Q13616 776 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 Q3C1V9 767 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 ARMC9Q7Z3E5 817 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 DEPDC1BQ8WUY9 529 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 FAM193BQ96PV7 902 aaPredicted RBP18.98■□□□□ 0.63
NPHP4-209ENST00000489180 LRRC53A6NM62 1247 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 HSPA6P17066 643 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 POLE2P56282 527 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 MUM1L1Q5H9M0 696 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 EMBQ6PCB8 327 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 PIP4K2CQ8TBX8 421 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 PRPF31Q8WWY3 499 aaKnown RBP18.98■□□□□ 0.63
NPHP4-209ENST00000489180 STRBPQ96SI9 672 aaKnown RBP18.98■□□□□ 0.63
NPHP4-209ENST00000489180 POLD4Q9HCU8 107 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 FNDC3AQ9Y2H6 1198 aaKnown RBP18.98■□□□□ 0.63
NPHP4-209ENST00000489180 POTEMA6NI47 508 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 BIRC2Q13490 618 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 C6orf118Q5T5N4 469 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 ARL6IP4Q66PJ3 421 aaKnown RBP18.98■□□□□ 0.63
NPHP4-209ENST00000489180 EEPD1Q7L9B9 569 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 PIGOQ8TEQ8 1089 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 MAP3K7O43318 606 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 MMEP08473 750 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 RNF207Q6ZRF8 634 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 HSPH1Q92598 858 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 HDAC6Q9UBN7 1215 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 NUB1Q9Y5A7 615 aa18.98■□□□□ 0.63
NPHP4-209ENST00000489180 PCGF5Q86SE9 256 aa18.97■□□□□ 0.63
NPHP4-209ENST00000489180 CYTH2Q99418 400 aa18.97■□□□□ 0.63
NPHP4-209ENST00000489180 PFDN6O15212 129 aa18.97■□□□□ 0.63
NPHP4-209ENST00000489180 S100BP04271 92 aaPredicted RBP18.97■□□□□ 0.63
NPHP4-209ENST00000489180 EIF3BP55884 814 aaKnown RBP18.97■□□□□ 0.63
NPHP4-209ENST00000489180 SNX25Q9H3E2 840 aa18.97■□□□□ 0.63
NPHP4-209ENST00000489180 SPATS2LQ9NUQ6 558 aaKnown RBP18.97■□□□□ 0.63
NPHP4-209ENST00000489180 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.97■□□□□ 0.63
NPHP4-209ENST00000489180 EPS15L1Q9UBC2 864 aa18.97■□□□□ 0.63
NPHP4-209ENST00000489180 PTPREP23469 700 aa18.97■□□□□ 0.63
NPHP4-209ENST00000489180 PRCPP42785 496 aa18.97■□□□□ 0.63
NPHP4-209ENST00000489180 SEPT2Q15019 361 aa18.97■□□□□ 0.63
NPHP4-209ENST00000489180 RAB44Q7Z6P3 723 aaPredicted RBP18.97■□□□□ 0.63
NPHP4-209ENST00000489180 DHX40Q8IX18 779 aaKnown RBP18.97■□□□□ 0.63
NPHP4-209ENST00000489180 RNF168Q8IYW5 571 aaPredicted RBP18.97■□□□□ 0.63
NPHP4-209ENST00000489180 FMR1NBQ8N0W7 255 aaPredicted RBP18.97■□□□□ 0.63
NPHP4-209ENST00000489180 ATP6V1E2Q96A05 226 aa18.97■□□□□ 0.63
NPHP4-209ENST00000489180 RPS6KC1Q96S38 1066 aa18.97■□□□□ 0.63
NPHP4-209ENST00000489180 SPC25Q9HBM1 224 aa18.97■□□□□ 0.63
NPHP4-209ENST00000489180 TTC37Q6PGP7 1564 aa18.97■□□□□ 0.63
NPHP4-209ENST00000489180 GNGT2O14610 69 aa18.97■□□□□ 0.63
NPHP4-209ENST00000489180 SRGAP2BP0DMP2 458 aa18.97■□□□□ 0.63
NPHP4-209ENST00000489180 ESRRAP11474 423 aaPredicted RBP18.97■□□□□ 0.63
NPHP4-209ENST00000489180 RWDD2BP57060 319 aa18.97■□□□□ 0.63
NPHP4-209ENST00000489180 CDO1Q16878 200 aa18.97■□□□□ 0.63
NPHP4-209ENST00000489180 TMTC4Q5T4D3 741 aa18.97■□□□□ 0.63
NPHP4-209ENST00000489180 SPOPLQ6IQ16 392 aa18.97■□□□□ 0.63
NPHP4-209ENST00000489180 USP6P35125 1406 aa18.97■□□□□ 0.63
NPHP4-209ENST00000489180 NMT2O60551 498 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 ADCY2Q08462 1091 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 FAM182BQ5T319 152 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 MIGA2Q7L4E1 593 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 PYROXD1Q8WU10 500 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 HAUS8Q9BT25 410 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 ZCCHC17Q9NP64 241 aaKnown RBP18.96■□□□□ 0.63
NPHP4-209ENST00000489180 SLC5A4Q9NY91 659 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 ANGPTL3Q9Y5C1 460 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 PNMA6FA0A0J9YX94 578 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 SH3BGRP55822 239 aaPredicted RBP18.96■□□□□ 0.63
NPHP4-209ENST00000489180 PHEXP78562 749 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 HIPK4Q8NE63 616 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 HEMGNQ9BXL5 484 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 DNAJC12Q9UKB3 198 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 TLK1Q9UKI8 766 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 ESYT3A0FGR9 886 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 ARL4AP40617 200 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 NFRKBQ6P4R8 1299 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 SAYSD1Q9NPB0 183 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 SCOCQ9UIL1 159 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 MYO1CO00159 1063 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 PRPSAP2O60256 369 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 CCND2P30279 289 aa18.96■□□□□ 0.63
NPHP4-209ENST00000489180 RSRC2Q7L4I2 434 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms