RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 JAK3P52333 1124 aa17.09■□□□□ 0.33
FDPS-213ENST00000489003 RESTQ13127 1097 aa17.09■□□□□ 0.33
FDPS-213ENST00000489003 PPP2R5CQ13362 524 aa17.09■□□□□ 0.33
FDPS-213ENST00000489003 PLCB4Q15147 1175 aa17.09■□□□□ 0.33
FDPS-213ENST00000489003 FAM160B1Q5W0V3 765 aa17.09■□□□□ 0.33
FDPS-213ENST00000489003 GDF6Q6KF10 455 aaPredicted RBP17.09■□□□□ 0.33
FDPS-213ENST00000489003 BRAPQ7Z569 592 aa17.09■□□□□ 0.33
FDPS-213ENST00000489003 CCDC60Q8IWA6 550 aaPredicted RBP17.09■□□□□ 0.33
FDPS-213ENST00000489003 RDM1Q8NG50 284 aa17.09■□□□□ 0.33
FDPS-213ENST00000489003 TTC12Q9H892 705 aaPredicted RBP17.09■□□□□ 0.33
FDPS-213ENST00000489003 GABBR1Q9UBS5 961 aa17.09■□□□□ 0.33
FDPS-213ENST00000489003 GTF2IRD1Q9UHL9 959 aa17.09■□□□□ 0.33
FDPS-213ENST00000489003 TCEAL9Q9UHQ7 104 aa17.09■□□□□ 0.33
FDPS-213ENST00000489003 ZMYND8Q9ULU4 1186 aaPredicted RBP17.09■□□□□ 0.33
FDPS-213ENST00000489003 TNRC18O15417 2968 aaPredicted RBP17.09■□□□□ 0.33
FDPS-213ENST00000489003 TRIM43BA6NCK2 446 aa17.08■□□□□ 0.32
FDPS-213ENST00000489003 BACH1O14867 736 aa17.08■□□□□ 0.32
FDPS-213ENST00000489003 TLR3O15455 904 aaKnown RBP17.08■□□□□ 0.32
FDPS-213ENST00000489003 CLTBP09497 229 aa17.08■□□□□ 0.32
FDPS-213ENST00000489003 SMIM10L2AP0DMW4 78 aa17.08■□□□□ 0.32
FDPS-213ENST00000489003 SMIM10L2BP0DMW5 78 aa17.08■□□□□ 0.32
FDPS-213ENST00000489003 MARK3P27448 753 aa17.08■□□□□ 0.32
FDPS-213ENST00000489003 ZNF200P98182 395 aaPredicted RBP17.08■□□□□ 0.32
FDPS-213ENST00000489003 SPIRE1Q08AE8 756 aa17.08■□□□□ 0.32
FDPS-213ENST00000489003 PTGDRQ13258 359 aa17.08■□□□□ 0.32
FDPS-213ENST00000489003 TRIM43Q96BQ3 446 aaPredicted RBP17.08■□□□□ 0.32
FDPS-213ENST00000489003 CTAGE1Q96RT6 745 aa17.08■□□□□ 0.32
FDPS-213ENST00000489003 PDLIM7Q9NR12 457 aa17.08■□□□□ 0.32
FDPS-213ENST00000489003 TMEM39AQ9NV64 488 aa17.08■□□□□ 0.32
FDPS-213ENST00000489003 SETD4Q9NVD3 440 aa17.08■□□□□ 0.32
FDPS-213ENST00000489003 PDE4DIPQ5VU43 2346 aa17.08■□□□□ 0.32
FDPS-213ENST00000489003 H0YGN5 161 aa17.07■□□□□ 0.32
FDPS-213ENST00000489003 KIAA0355O15063 1070 aa17.07■□□□□ 0.32
FDPS-213ENST00000489003 OR52Z1P0C646 297 aa17.07■□□□□ 0.32
FDPS-213ENST00000489003 PDIA4P13667 645 aaKnown RBP17.07■□□□□ 0.32
FDPS-213ENST00000489003 SYN1P17600 705 aa17.07■□□□□ 0.32
FDPS-213ENST00000489003 TECP42680 631 aa17.07■□□□□ 0.32
FDPS-213ENST00000489003 SLC26A2P50443 739 aa17.07■□□□□ 0.32
FDPS-213ENST00000489003 EPHA7Q15375 998 aa17.07■□□□□ 0.32
FDPS-213ENST00000489003 PTGISQ16647 500 aa17.07■□□□□ 0.32
FDPS-213ENST00000489003 PDXDC2PQ6P474 469 aa17.07■□□□□ 0.32
FDPS-213ENST00000489003 FAM173BQ6P4H8 233 aa17.07■□□□□ 0.32
FDPS-213ENST00000489003 PCDH10Q9P2E7 1040 aa17.07■□□□□ 0.32
FDPS-213ENST00000489003 C17orf102A2RUQ5 167 aa17.06■□□□□ 0.32
FDPS-213ENST00000489003 CYP2C9P11712 490 aa17.06■□□□□ 0.32
FDPS-213ENST00000489003 INSRRP14616 1297 aa17.06■□□□□ 0.32
FDPS-213ENST00000489003 HOXC8P31273 242 aa17.06■□□□□ 0.32
FDPS-213ENST00000489003 ADAM17P78536 824 aa17.06■□□□□ 0.32
FDPS-213ENST00000489003 NCAPH2Q6IBW4 605 aa17.06■□□□□ 0.32
FDPS-213ENST00000489003 ZSCAN16Q9H4T2 348 aaPredicted RBP17.06■□□□□ 0.32
FDPS-213ENST00000489003 PRDM5Q9NQX1 630 aaPredicted RBP17.06■□□□□ 0.32
FDPS-213ENST00000489003 TBX21Q9UL17 535 aa17.06■□□□□ 0.32
FDPS-213ENST00000489003 POTEB3A0JP26 581 aa17.05■□□□□ 0.32
FDPS-213ENST00000489003 TREHO43280 583 aa17.05■□□□□ 0.32
FDPS-213ENST00000489003 ZNF862O60290 1169 aa17.05■□□□□ 0.32
FDPS-213ENST00000489003 STBD1O95210 358 aa17.05■□□□□ 0.32
FDPS-213ENST00000489003 ZSCAN22P10073 491 aaPredicted RBP17.05■□□□□ 0.32
FDPS-213ENST00000489003 ITGB8P26012 769 aa17.05■□□□□ 0.32
FDPS-213ENST00000489003 PKP1Q13835 747 aa17.05■□□□□ 0.32
FDPS-213ENST00000489003 IL17AQ16552 155 aa17.05■□□□□ 0.32
FDPS-213ENST00000489003 UGCGQ16739 394 aa17.05■□□□□ 0.32
FDPS-213ENST00000489003 POTEBQ6S5H4 581 aa17.05■□□□□ 0.32
FDPS-213ENST00000489003 ATP8B4Q8TF62 1192 aa17.05■□□□□ 0.32
FDPS-213ENST00000489003 TNPO1Q92973 898 aaKnown RBP17.05■□□□□ 0.32
FDPS-213ENST00000489003 NRCAMQ92823 1304 aa17.04■□□□□ 0.32
FDPS-213ENST00000489003 IGSF9BQ9UPX0 1349 aa17.04■□□□□ 0.32
FDPS-213ENST00000489003 LAD1O00515 517 aa17.04■□□□□ 0.32
FDPS-213ENST00000489003 HBP1O60381 514 aa17.04■□□□□ 0.32
FDPS-213ENST00000489003 SLITRK3O94933 977 aa17.04■□□□□ 0.32
FDPS-213ENST00000489003 P4HBP07237 508 aaKnown RBP17.04■□□□□ 0.32
FDPS-213ENST00000489003 GNAT1P11488 350 aa17.04■□□□□ 0.32
FDPS-213ENST00000489003 ATP2C1P98194 919 aaPredicted RBP17.04■□□□□ 0.32
FDPS-213ENST00000489003 PPFIA1Q13136 1202 aa17.04■□□□□ 0.32
FDPS-213ENST00000489003 GRIK4Q16099 956 aa17.04■□□□□ 0.32
FDPS-213ENST00000489003 FOXD4L5Q5VV16 416 aaPredicted RBP17.04■□□□□ 0.32
FDPS-213ENST00000489003 TRMT1LQ7Z2T5 733 aaKnown RBP17.04■□□□□ 0.32
FDPS-213ENST00000489003 BANK1Q8NDB2 785 aa17.04■□□□□ 0.32
FDPS-213ENST00000489003 LMBR1Q8WVP7 490 aa17.04■□□□□ 0.32
FDPS-213ENST00000489003 FOXD4L4Q8WXT5 416 aaPredicted RBP17.04■□□□□ 0.32
FDPS-213ENST00000489003 BBXQ8WY36 941 aaPredicted RBP17.04■□□□□ 0.32
FDPS-213ENST00000489003 ATP6V0A1Q93050 837 aa17.04■□□□□ 0.32
FDPS-213ENST00000489003 HSD17B14Q9BPX1 270 aa17.04■□□□□ 0.32
FDPS-213ENST00000489003 NRBP2Q9NSY0 501 aa17.04■□□□□ 0.32
FDPS-213ENST00000489003 RGL1Q9NZL6 768 aa17.04■□□□□ 0.32
FDPS-213ENST00000489003 PRKAG2Q9UGJ0 569 aa17.04■□□□□ 0.32
FDPS-213ENST00000489003 TRPC6Q9Y210 931 aa17.04■□□□□ 0.32
FDPS-213ENST00000489003 RRN3P2A6NIE6 340 aa17.03■□□□□ 0.32
FDPS-213ENST00000489003 TIMP1P01033 207 aa17.03■□□□□ 0.32
FDPS-213ENST00000489003 PRPHP41219 470 aa17.03■□□□□ 0.32
FDPS-213ENST00000489003 QARSP47897 775 aaKnown RBP17.03■□□□□ 0.32
FDPS-213ENST00000489003 PSMC5P62195 406 aa17.03■□□□□ 0.32
FDPS-213ENST00000489003 IGBP1P78318 339 aa17.03■□□□□ 0.32
FDPS-213ENST00000489003 SF3A1Q15459 793 aaKnown RBP17.03■□□□□ 0.32
FDPS-213ENST00000489003 ZNF484Q5JVG2 852 aa17.03■□□□□ 0.32
FDPS-213ENST00000489003 MARCH8Q5T0T0 291 aa17.03■□□□□ 0.32
FDPS-213ENST00000489003 CKAP2LQ8IYA6 745 aa17.03■□□□□ 0.32
FDPS-213ENST00000489003 TRAPPC12Q8WVT3 735 aa17.03■□□□□ 0.32
FDPS-213ENST00000489003 DHX38Q92620 1227 aaKnown RBP17.03■□□□□ 0.32
FDPS-213ENST00000489003 DYDC2Q96IM9 177 aa17.03■□□□□ 0.32
FDPS-213ENST00000489003 EIF2AK1Q9BQI3 630 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms