RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 LRRC45Q96CN5 670 aa21.37■■□□□ 1.01
HMG20B-213ENST00000488973 BMP2KQ9NSY1 1161 aaPredicted RBP21.37■■□□□ 1.01
HMG20B-213ENST00000488973 NHSQ6T4R5 1651 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 BHMG1C9JSJ3 638 aaPredicted RBP21.36■■□□□ 1.01
HMG20B-213ENST00000488973 ECHS1P30084 290 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 NOVP48745 357 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 USP11P51784 963 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 ERVK-9P63128 1117 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 DRP2Q13474 957 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 PLCB4Q15147 1175 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 DIXDC1Q155Q3 683 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 KLHL7Q8IXQ5 586 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 FAM133AQ8N9E0 248 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 CALR3Q96L12 384 aaKnown RBP21.36■■□□□ 1.01
HMG20B-213ENST00000488973 GANQ9H2C0 597 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 COL24A1Q17RW2 1714 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 GCOM1H8Y6P7 765 aaPredicted RBP21.36■■□□□ 1.01
HMG20B-213ENST00000488973 MYO1FO00160 1098 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 KIF4AO95239 1232 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 MYZAPP0CAP1 466 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 HSD17B3P37058 310 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 SEC24CP53992 1094 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 RNASE9P60153 205 aaKnown RBP21.36■■□□□ 1.01
HMG20B-213ENST00000488973 BIRC2Q13490 618 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 ECM1Q16610 540 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 IFI16Q16666 785 aaKnown RBP21.36■■□□□ 1.01
HMG20B-213ENST00000488973 ZC3H3Q8IXZ2 948 aaKnown RBP21.36■■□□□ 1.01
HMG20B-213ENST00000488973 POLD4Q9HCU8 107 aa21.36■■□□□ 1.01
HMG20B-213ENST00000488973 H0YGN5 161 aa21.35■■□□□ 1.01
HMG20B-213ENST00000488973 KCNK3O14649 394 aa21.35■■□□□ 1.01
HMG20B-213ENST00000488973 HDLBPQ00341 1268 aaKnown RBP21.35■■□□□ 1.01
HMG20B-213ENST00000488973 HLTFQ14527 1009 aaKnown RBP eCLIP21.35■■□□□ 1.01
HMG20B-213ENST00000488973 TBC1D9BQ66K14 1250 aa21.35■■□□□ 1.01
HMG20B-213ENST00000488973 C6orf89Q6UWU4 347 aa21.35■■□□□ 1.01
HMG20B-213ENST00000488973 CEP95Q96GE4 821 aa21.35■■□□□ 1.01
HMG20B-213ENST00000488973 NFS1Q9Y697 457 aa21.35■■□□□ 1.01
HMG20B-213ENST00000488973 AFF2P51816 1311 aa21.35■■□□□ 1.01
HMG20B-213ENST00000488973 E7EVH7 732 aa21.35■■□□□ 1.01
HMG20B-213ENST00000488973 ARID5AQ03989 594 aa21.35■■□□□ 1.01
HMG20B-213ENST00000488973 ACTN3Q08043 901 aaPredicted RBP21.35■■□□□ 1.01
HMG20B-213ENST00000488973 BIRC3Q13489 604 aa21.35■■□□□ 1.01
HMG20B-213ENST00000488973 UBA5Q9GZZ9 404 aa21.35■■□□□ 1.01
HMG20B-213ENST00000488973 VCPKMTQ9H867 229 aa21.35■■□□□ 1.01
HMG20B-213ENST00000488973 PCDHA2Q9Y5H9 948 aa21.35■■□□□ 1.01
HMG20B-213ENST00000488973 ARFGEF1Q9Y6D6 1849 aa21.34■■□□□ 1.01
HMG20B-213ENST00000488973 TTC36A6NLP5 189 aa21.34■■□□□ 1.01
HMG20B-213ENST00000488973 USP17L5A8MUK1 530 aa21.34■■□□□ 1.01
HMG20B-213ENST00000488973 HYIQ5T013 277 aa21.34■■□□□ 1.01
HMG20B-213ENST00000488973 RUFY4Q6ZNE9 571 aa21.34■■□□□ 1.01
HMG20B-213ENST00000488973 CCDC65Q8IXS2 484 aa21.34■■□□□ 1.01
HMG20B-213ENST00000488973 BZW2Q9Y6E2 419 aaKnown RBP21.34■■□□□ 1.01
HMG20B-213ENST00000488973 TNRC6CQ9HCJ0 1690 aaKnown RBP21.34■■□□□ 1.01
HMG20B-213ENST00000488973 RPS6KA4O75676 772 aa21.34■■□□□ 1.01
HMG20B-213ENST00000488973 NT5C3AQ9H0P0 336 aa21.34■■□□□ 1.01
HMG20B-213ENST00000488973 KDM3AQ9Y4C1 1321 aa21.34■■□□□ 1.01
HMG20B-213ENST00000488973 PPP4R3CPQ6ZMV5 832 aa21.33■■□□□ 1.01
HMG20B-213ENST00000488973 COA7Q96BR5 231 aa21.33■■□□□ 1.01
HMG20B-213ENST00000488973 RTFDC1Q9BY42 306 aaPredicted RBP21.33■■□□□ 1.01
HMG20B-213ENST00000488973 KCTD10Q9H3F6 313 aa21.33■■□□□ 1.01
HMG20B-213ENST00000488973 TRPC5Q9UL62 973 aaPredicted RBP21.33■■□□□ 1.01
HMG20B-213ENST00000488973 EPS15P42566 896 aa21.33■■□□□ 1
HMG20B-213ENST00000488973 SMTNP53814 917 aa21.33■■□□□ 1
HMG20B-213ENST00000488973 SARNPP82979 210 aaKnown RBP21.33■■□□□ 1
HMG20B-213ENST00000488973 UAP1Q16222 522 aaPredicted RBP21.33■■□□□ 1
HMG20B-213ENST00000488973 RNF187Q5TA31 235 aaPredicted RBP21.33■■□□□ 1
HMG20B-213ENST00000488973 LRRC57Q8N9N7 239 aa21.33■■□□□ 1
HMG20B-213ENST00000488973 SLC12A6Q9UHW9 1150 aa21.33■■□□□ 1
HMG20B-213ENST00000488973 ATP8B3O60423 1300 aa21.33■■□□□ 1
HMG20B-213ENST00000488973 CCDC188H7C350 402 aa21.32■■□□□ 1
HMG20B-213ENST00000488973 PDHBP11177 359 aa21.32■■□□□ 1
HMG20B-213ENST00000488973 HPDP32754 393 aaPredicted RBP21.32■■□□□ 1
HMG20B-213ENST00000488973 PTK2Q05397 1052 aa21.32■■□□□ 1
HMG20B-213ENST00000488973 GRIK5Q16478 980 aa21.32■■□□□ 1
HMG20B-213ENST00000488973 EDRF1Q3B7T1 1238 aa21.32■■□□□ 1
HMG20B-213ENST00000488973 PPP1R18Q6NYC8 613 aa21.32■■□□□ 1
HMG20B-213ENST00000488973 IRF2BP2Q7Z5L9 587 aa21.32■■□□□ 1
HMG20B-213ENST00000488973 NBPF5PQ86XG9 351 aaPredicted RBP21.32■■□□□ 1
HMG20B-213ENST00000488973 MIEF2Q96C03 454 aa21.32■■□□□ 1
HMG20B-213ENST00000488973 CYFIP2Q96F07 1278 aa21.32■■□□□ 1
HMG20B-213ENST00000488973 FGFBP2Q9BYJ0 223 aa21.32■■□□□ 1
HMG20B-213ENST00000488973 GMNCA6NCL1 334 aa21.31■■□□□ 1
HMG20B-213ENST00000488973 PGRMC1O00264 195 aaKnown RBP21.31■■□□□ 1
HMG20B-213ENST00000488973 CTNNA1P35221 906 aaKnown RBP21.31■■□□□ 1
HMG20B-213ENST00000488973 IRX1P78414 480 aaPredicted RBP21.31■■□□□ 1
HMG20B-213ENST00000488973 ZNF844Q08AG5 666 aa21.31■■□□□ 1
HMG20B-213ENST00000488973 KCNH2Q12809 1159 aa21.31■■□□□ 1
HMG20B-213ENST00000488973 IFT88Q13099 833 aa21.31■■□□□ 1
HMG20B-213ENST00000488973 ADAM9Q13443 819 aa21.31■■□□□ 1
HMG20B-213ENST00000488973 MTMR3Q13615 1198 aa21.31■■□□□ 1
HMG20B-213ENST00000488973 AGBL2Q5U5Z8 902 aa21.31■■□□□ 1
HMG20B-213ENST00000488973 SCFD1Q8WVM8 642 aa21.31■■□□□ 1
HMG20B-213ENST00000488973 HAS1Q92839 578 aa21.31■■□□□ 1
HMG20B-213ENST00000488973 PPANQ9NQ55 473 aaKnown RBP21.31■■□□□ 1
HMG20B-213ENST00000488973 DDX25Q9UHL0 483 aaKnown RBP21.31■■□□□ 1
HMG20B-213ENST00000488973 BTAF1O14981 1849 aa21.31■■□□□ 1
HMG20B-213ENST00000488973 CEP104O60308 925 aa21.31■■□□□ 1
HMG20B-213ENST00000488973 ZBTB48P10074 688 aaPredicted RBP21.31■■□□□ 1
HMG20B-213ENST00000488973 KCNQ4P56696 695 aa21.31■■□□□ 1
HMG20B-213ENST00000488973 ENOX2Q16206 610 aaKnown RBP21.31■■□□□ 1
HMG20B-213ENST00000488973 ASPRV1Q53RT3 343 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms