RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 LTBRP36941 435 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 MTMR1Q13613 665 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 SMAD2Q15796 467 aaKnown RBP21.87■■□□□ 1.09
GGPS1-206ENST00000488594 CASC1Q6TDU7 716 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 DNAJB3Q8WWF6 145 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 TNPO1Q92973 898 aaKnown RBP21.87■■□□□ 1.09
GGPS1-206ENST00000488594 MYL10Q9BUA6 226 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 KCNH6Q9H252 994 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 PIEZO1Q92508 2521 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 NLRC5Q86WI3 1866 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 RRN3P2A6NIE6 340 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 MMP1P03956 469 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 HYAL1Q12794 435 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 MARCH8Q5T0T0 291 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 IER5Q5VY09 327 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 MAP4K1Q92918 833 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 FTHL17Q9BXU8 183 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 UBIAD1Q9Y5Z9 338 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 CDY2AQ9Y6F7 541 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 SQORQ9Y6N5 450 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 SPDYE3A6NKU9 549 aa21.86■■□□□ 1.09
GGPS1-206ENST00000488594 CALM1P0DP23 149 aa21.86■■□□□ 1.09
GGPS1-206ENST00000488594 CALM2P0DP24 149 aa21.86■■□□□ 1.09
GGPS1-206ENST00000488594 CALM3P0DP25 149 aa21.86■■□□□ 1.09
GGPS1-206ENST00000488594 MRPS6P82932 125 aaKnown RBP21.86■■□□□ 1.09
GGPS1-206ENST00000488594 NAALADL2Q58DX5 795 aa21.86■■□□□ 1.09
GGPS1-206ENST00000488594 P2RX5Q93086 422 aa21.86■■□□□ 1.09
GGPS1-206ENST00000488594 PPP2R3CQ969Q6 453 aa21.86■■□□□ 1.09
GGPS1-206ENST00000488594 SMAD4Q13485 552 aaKnown RBP21.85■■□□□ 1.09
GGPS1-206ENST00000488594 NFXL1Q6ZNB6 911 aa21.85■■□□□ 1.09
GGPS1-206ENST00000488594 CMTR2Q8IYT2 770 aaKnown RBP21.85■■□□□ 1.09
GGPS1-206ENST00000488594 SRBD1Q8N5C6 995 aaKnown RBP21.85■■□□□ 1.09
GGPS1-206ENST00000488594 TMEM87BQ96K49 555 aa21.85■■□□□ 1.09
GGPS1-206ENST00000488594 JADE2Q9NQC1 790 aa21.85■■□□□ 1.09
GGPS1-206ENST00000488594 PLAGL2Q9UPG8 496 aa21.85■■□□□ 1.09
GGPS1-206ENST00000488594 DOCK5Q9H7D0 1870 aa21.84■■□□□ 1.09
GGPS1-206ENST00000488594 CCDC69A6NI79 296 aa21.84■■□□□ 1.09
GGPS1-206ENST00000488594 M0QZ92 97 aa21.84■■□□□ 1.09
GGPS1-206ENST00000488594 MBTPS2O43462 519 aa21.84■■□□□ 1.09
GGPS1-206ENST00000488594 PRC1O43663 620 aa21.84■■□□□ 1.09
GGPS1-206ENST00000488594 PLEKHA8P1O95397 391 aa21.84■■□□□ 1.09
GGPS1-206ENST00000488594 MCM5P33992 734 aa21.84■■□□□ 1.09
GGPS1-206ENST00000488594 IRS1P35568 1242 aa21.84■■□□□ 1.09
GGPS1-206ENST00000488594 FAM43BQ6ZT52 329 aaPredicted RBP21.84■■□□□ 1.09
GGPS1-206ENST00000488594 AZI2Q9H6S1 392 aa21.84■■□□□ 1.09
GGPS1-206ENST00000488594 AGO3Q9H9G7 860 aaKnown RBP21.84■■□□□ 1.09
GGPS1-206ENST00000488594 JPH1Q9HDC5 661 aaPredicted RBP21.84■■□□□ 1.09
GGPS1-206ENST00000488594 RBM8AQ9Y5S9 174 aaKnown RBP21.84■■□□□ 1.09
GGPS1-206ENST00000488594 CD52P31358 61 aa21.83■■□□□ 1.08
GGPS1-206ENST00000488594 IGBP1P78318 339 aa21.83■■□□□ 1.08
GGPS1-206ENST00000488594 DLX2Q07687 328 aaPredicted RBP21.83■■□□□ 1.08
GGPS1-206ENST00000488594 NPAS4Q8IUM7 802 aa21.83■■□□□ 1.08
GGPS1-206ENST00000488594 PKD2L1Q9P0L9 805 aa21.83■■□□□ 1.08
GGPS1-206ENST00000488594 KAT6AQ92794 2004 aa21.82■■□□□ 1.08
GGPS1-206ENST00000488594 TBX10O75333 385 aa21.82■■□□□ 1.08
GGPS1-206ENST00000488594 STAG3L1P0CL83 205 aa21.82■■□□□ 1.08
GGPS1-206ENST00000488594 INSRRP14616 1297 aa21.82■■□□□ 1.08
GGPS1-206ENST00000488594 LIFRP42702 1097 aa21.82■■□□□ 1.08
GGPS1-206ENST00000488594 CLUL1Q15846 466 aa21.82■■□□□ 1.08
GGPS1-206ENST00000488594 ALYREFQ86V81 257 aaKnown RBP21.82■■□□□ 1.08
GGPS1-206ENST00000488594 TEX2Q8IWB9 1127 aa21.82■■□□□ 1.08
GGPS1-206ENST00000488594 CRIPAKQ8N1N5 446 aa21.82■■□□□ 1.08
GGPS1-206ENST00000488594 FAM49AQ9H0Q0 323 aaPredicted RBP21.82■■□□□ 1.08
GGPS1-206ENST00000488594 ALG13Q9NP73 1137 aaKnown RBP21.82■■□□□ 1.08
GGPS1-206ENST00000488594 CD207Q9UJ71 328 aa21.82■■□□□ 1.08
GGPS1-206ENST00000488594 PCDHA6Q9UN73 950 aa21.82■■□□□ 1.08
GGPS1-206ENST00000488594 PCDHA8Q9Y5H6 950 aa21.82■■□□□ 1.08
GGPS1-206ENST00000488594 TRPV2Q9Y5S1 764 aa21.82■■□□□ 1.08
GGPS1-206ENST00000488594 MRPL42Q9Y6G3 142 aaKnown RBP21.82■■□□□ 1.08
GGPS1-206ENST00000488594 MYO7AQ13402 2215 aa21.81■■□□□ 1.08
GGPS1-206ENST00000488594 TTC3P53804 2025 aa21.81■■□□□ 1.08
GGPS1-206ENST00000488594 SH2B2O14492 632 aaPredicted RBP21.81■■□□□ 1.08
GGPS1-206ENST00000488594 ADAM15Q13444 863 aa21.81■■□□□ 1.08
GGPS1-206ENST00000488594 CAMK1Q14012 370 aa21.81■■□□□ 1.08
GGPS1-206ENST00000488594 UBE2SQ16763 222 aa21.81■■□□□ 1.08
GGPS1-206ENST00000488594 HERC4Q5GLZ8 1057 aaPredicted RBP21.81■■□□□ 1.08
GGPS1-206ENST00000488594 LINC01599Q8WXQ3 324 aa21.81■■□□□ 1.08
GGPS1-206ENST00000488594 IGFLR1Q9H665 355 aa21.81■■□□□ 1.08
GGPS1-206ENST00000488594 SLC9A2Q9UBY0 812 aa21.81■■□□□ 1.08
GGPS1-206ENST00000488594 TRPC6Q9Y210 931 aa21.81■■□□□ 1.08
GGPS1-206ENST00000488594 PCDHA2Q9Y5H9 948 aa21.81■■□□□ 1.08
GGPS1-206ENST00000488594 SLC12A7Q9Y666 1083 aa21.81■■□□□ 1.08
GGPS1-206ENST00000488594 NDUFV1P49821 464 aa21.8■■□□□ 1.08
GGPS1-206ENST00000488594 PAK2Q13177 524 aa21.8■■□□□ 1.08
GGPS1-206ENST00000488594 PLPPR4Q7Z2D5 763 aa21.8■■□□□ 1.08
GGPS1-206ENST00000488594 CMTR1Q8N1G2 835 aaKnown RBP21.8■■□□□ 1.08
GGPS1-206ENST00000488594 NME8Q8N427 588 aa21.8■■□□□ 1.08
GGPS1-206ENST00000488594 MFSD14AQ96MC6 490 aa21.8■■□□□ 1.08
GGPS1-206ENST00000488594 PCYT2Q99447 389 aa21.8■■□□□ 1.08
GGPS1-206ENST00000488594 SDF4Q9BRK5 362 aa21.8■■□□□ 1.08
GGPS1-206ENST00000488594 KCNH7Q9NS40 1196 aa21.8■■□□□ 1.08
GGPS1-206ENST00000488594 IGSF9BQ9UPX0 1349 aa21.8■■□□□ 1.08
GGPS1-206ENST00000488594 STXBP3O00186 592 aa21.79■■□□□ 1.08
GGPS1-206ENST00000488594 GTF2F1P35269 517 aaKnown RBP eCLIP21.79■■□□□ 1.082e-6■■■■□ 26
GGPS1-206ENST00000488594 RTN4RL1Q86UN2 441 aaPredicted RBP21.79■■□□□ 1.08
GGPS1-206ENST00000488594 CELF4Q9BZC1 486 aaKnown RBP21.79■■□□□ 1.08
GGPS1-206ENST00000488594 PADI3Q9ULW8 664 aa21.79■■□□□ 1.08
GGPS1-206ENST00000488594 NFASCO94856 1347 aa21.79■■□□□ 1.08
GGPS1-206ENST00000488594 LINC01565O15544 149 aa21.78■■□□□ 1.08
GGPS1-206ENST00000488594 EYA4O95677 639 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms