RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 GABBR1Q9UBS5 961 aa17.71■□□□□ 0.43
C9orf3-219ENST00000488186 NOD1Q9Y239 953 aa17.71■□□□□ 0.43
C9orf3-219ENST00000488186 LGR5O75473 907 aa17.7■□□□□ 0.42
C9orf3-219ENST00000488186 F13A1P00488 732 aa17.7■□□□□ 0.42
C9orf3-219ENST00000488186 SLC26A2P50443 739 aa17.7■□□□□ 0.42
C9orf3-219ENST00000488186 CDK7P50613 346 aa17.7■□□□□ 0.42
C9orf3-219ENST00000488186 PTPN11Q06124 597 aaPredicted RBP17.7■□□□□ 0.42
C9orf3-219ENST00000488186 PPP2R5CQ13362 524 aa17.7■□□□□ 0.42
C9orf3-219ENST00000488186 TRIM60Q495X7 471 aa17.7■□□□□ 0.42
C9orf3-219ENST00000488186 DTHD1Q6ZMT9 781 aa17.7■□□□□ 0.42
C9orf3-219ENST00000488186 PRKAG2Q9UGJ0 569 aa17.7■□□□□ 0.42
C9orf3-219ENST00000488186 TRPC6Q9Y210 931 aa17.7■□□□□ 0.42
C9orf3-219ENST00000488186 EMSYQ7Z589 1322 aa17.7■□□□□ 0.42
C9orf3-219ENST00000488186 DKC1O60832 514 aaKnown RBP eCLIP17.69■□□□□ 0.42
C9orf3-219ENST00000488186 GNAT1P11488 350 aa17.69■□□□□ 0.42
C9orf3-219ENST00000488186 CEBPZQ03701 1054 aaKnown RBP17.69■□□□□ 0.42
C9orf3-219ENST00000488186 TLE2Q04725 743 aa17.69■□□□□ 0.42
C9orf3-219ENST00000488186 FOXD4L6Q3SYB3 417 aaPredicted RBP17.69■□□□□ 0.42
C9orf3-219ENST00000488186 FAM173BQ6P4H8 233 aa17.69■□□□□ 0.42
C9orf3-219ENST00000488186 FOXD4L3Q6VB84 417 aaPredicted RBP17.69■□□□□ 0.42
C9orf3-219ENST00000488186 TRMT1LQ7Z2T5 733 aaKnown RBP17.69■□□□□ 0.42
C9orf3-219ENST00000488186 C7orf61Q8IZ16 206 aa17.69■□□□□ 0.42
C9orf3-219ENST00000488186 ERMNQ8TAM6 284 aa17.69■□□□□ 0.42
C9orf3-219ENST00000488186 PPP1R13LQ8WUF5 828 aa17.69■□□□□ 0.42
C9orf3-219ENST00000488186 ATP6V0A1Q93050 837 aa17.69■□□□□ 0.42
C9orf3-219ENST00000488186 NRBP2Q9NSY0 501 aa17.69■□□□□ 0.42
C9orf3-219ENST00000488186 VAV3Q9UKW4 847 aa17.69■□□□□ 0.42
C9orf3-219ENST00000488186 GRIN2DO15399 1336 aa17.69■□□□□ 0.42
C9orf3-219ENST00000488186 C17orf102A2RUQ5 167 aa17.68■□□□□ 0.42
C9orf3-219ENST00000488186 HAS3O00219 553 aa17.68■□□□□ 0.42
C9orf3-219ENST00000488186 SMIM10L2AP0DMW4 78 aa17.68■□□□□ 0.42
C9orf3-219ENST00000488186 SMIM10L2BP0DMW5 78 aa17.68■□□□□ 0.42
C9orf3-219ENST00000488186 EPHA7Q15375 998 aa17.68■□□□□ 0.42
C9orf3-219ENST00000488186 SF3A1Q15459 793 aaKnown RBP17.68■□□□□ 0.42
C9orf3-219ENST00000488186 CCDC60Q8IWA6 550 aaPredicted RBP17.68■□□□□ 0.42
C9orf3-219ENST00000488186 C4orf32Q8N8J7 132 aa17.68■□□□□ 0.42
C9orf3-219ENST00000488186 AFAP1L1Q8TED9 768 aa17.68■□□□□ 0.42
C9orf3-219ENST00000488186 PCYT2Q99447 389 aa17.68■□□□□ 0.42
C9orf3-219ENST00000488186 RNPEPQ9H4A4 650 aa17.68■□□□□ 0.42
C9orf3-219ENST00000488186 HDAC6Q9UBN7 1215 aa17.68■□□□□ 0.42
C9orf3-219ENST00000488186 RBM19Q9Y4C8 960 aaKnown RBP17.68■□□□□ 0.42
C9orf3-219ENST00000488186 IGKV6D-21A0A0A0MT36 114 aa17.67■□□□□ 0.42
C9orf3-219ENST00000488186 POTEB3A0JP26 581 aa17.67■□□□□ 0.42
C9orf3-219ENST00000488186 EML1O00423 815 aa17.67■□□□□ 0.42
C9orf3-219ENST00000488186 P4HBP07237 508 aaKnown RBP17.67■□□□□ 0.42
C9orf3-219ENST00000488186 PRPHP41219 470 aa17.67■□□□□ 0.42
C9orf3-219ENST00000488186 NUCB2P80303 420 aa17.67■□□□□ 0.42
C9orf3-219ENST00000488186 PKP1Q13835 747 aa17.67■□□□□ 0.42
C9orf3-219ENST00000488186 POTEBQ6S5H4 581 aa17.67■□□□□ 0.42
C9orf3-219ENST00000488186 BANK1Q8NDB2 785 aa17.67■□□□□ 0.42
C9orf3-219ENST00000488186 PRDM5Q9NQX1 630 aaPredicted RBP17.67■□□□□ 0.42
C9orf3-219ENST00000488186 TSHZ2Q9NRE2 1034 aa17.67■□□□□ 0.42
C9orf3-219ENST00000488186 TMEM39AQ9NV64 488 aa17.67■□□□□ 0.42
C9orf3-219ENST00000488186 LRWD1Q9UFC0 647 aa17.67■□□□□ 0.42
C9orf3-219ENST00000488186 ATP6V1DQ9Y5K8 247 aa17.67■□□□□ 0.42
C9orf3-219ENST00000488186 MAFBQ9Y5Q3 323 aaPredicted RBP17.67■□□□□ 0.42
C9orf3-219ENST00000488186 CLIC4Q9Y696 253 aa17.67■□□□□ 0.42
C9orf3-219ENST00000488186 STK24Q9Y6E0 443 aa17.67■□□□□ 0.42
C9orf3-219ENST00000488186 HBP1O60381 514 aa17.66■□□□□ 0.42
C9orf3-219ENST00000488186 BRD1O95696 1058 aa17.66■□□□□ 0.42
C9orf3-219ENST00000488186 CLTBP09497 229 aa17.66■□□□□ 0.42
C9orf3-219ENST00000488186 QARSP47897 775 aaKnown RBP17.66■□□□□ 0.42
C9orf3-219ENST00000488186 PSMC5P62195 406 aa17.66■□□□□ 0.42
C9orf3-219ENST00000488186 IGBP1P78318 339 aa17.66■□□□□ 0.42
C9orf3-219ENST00000488186 ATP2C1P98194 919 aaPredicted RBP17.66■□□□□ 0.42
C9orf3-219ENST00000488186 PPFIA1Q13136 1202 aa17.66■□□□□ 0.42
C9orf3-219ENST00000488186 PDIA5Q14554 519 aa17.66■□□□□ 0.42
C9orf3-219ENST00000488186 PLCB4Q15147 1175 aa17.66■□□□□ 0.42
C9orf3-219ENST00000488186 PTGISQ16647 500 aa17.66■□□□□ 0.42
C9orf3-219ENST00000488186 ARL6IP4Q66PJ3 421 aaKnown RBP17.66■□□□□ 0.42
C9orf3-219ENST00000488186 B3GNT9Q6UX72 402 aa17.66■□□□□ 0.42
C9orf3-219ENST00000488186 SESTD1Q86VW0 696 aa17.66■□□□□ 0.42
C9orf3-219ENST00000488186 TPH2Q8IWU9 490 aa17.66■□□□□ 0.42
C9orf3-219ENST00000488186 DYDC2Q96IM9 177 aa17.66■□□□□ 0.42
C9orf3-219ENST00000488186 FAM167AQ96KS9 214 aa17.66■□□□□ 0.42
C9orf3-219ENST00000488186 EIF2AK1Q9BQI3 630 aaKnown RBP17.66■□□□□ 0.42
C9orf3-219ENST00000488186 TRPV6Q9H1D0 765 aa17.66■□□□□ 0.42
C9orf3-219ENST00000488186 SETD4Q9NVD3 440 aa17.66■□□□□ 0.42
C9orf3-219ENST00000488186 GTF2IRD1Q9UHL9 959 aa17.66■□□□□ 0.42
C9orf3-219ENST00000488186 NRCAMQ92823 1304 aa17.66■□□□□ 0.42
C9orf3-219ENST00000488186 VWA3AA6NCI4 1184 aa17.65■□□□□ 0.42
C9orf3-219ENST00000488186 POTEMA6NI47 508 aa17.65■□□□□ 0.42
C9orf3-219ENST00000488186 RRN3P2A6NIE6 340 aa17.65■□□□□ 0.42
C9orf3-219ENST00000488186 DDX11L8A8MPP1 907 aa17.65■□□□□ 0.42
C9orf3-219ENST00000488186 H0YGN5 161 aa17.65■□□□□ 0.42
C9orf3-219ENST00000488186 FXR2P51116 673 aaKnown RBP eCLIP17.65■□□□□ 0.42
C9orf3-219ENST00000488186 CYP4A11Q02928 519 aa17.65■□□□□ 0.42
C9orf3-219ENST00000488186 STK38Q15208 465 aa17.65■□□□□ 0.42
C9orf3-219ENST00000488186 GDF6Q6KF10 455 aaPredicted RBP17.65■□□□□ 0.42
C9orf3-219ENST00000488186 FAM126BQ8IXS8 530 aa17.65■□□□□ 0.42
C9orf3-219ENST00000488186 NEK9Q8TD19 979 aa17.65■□□□□ 0.42
C9orf3-219ENST00000488186 ATP8B4Q8TF62 1192 aa17.65■□□□□ 0.42
C9orf3-219ENST00000488186 BBXQ8WY36 941 aaPredicted RBP17.65■□□□□ 0.42
C9orf3-219ENST00000488186 ZSWIM4Q9H7M6 989 aa17.65■□□□□ 0.42
C9orf3-219ENST00000488186 TRMT13Q9NUP7 481 aaKnown RBP17.65■□□□□ 0.42
C9orf3-219ENST00000488186 TFIP11Q9UBB9 837 aaKnown RBP17.65■□□□□ 0.42
C9orf3-219ENST00000488186 CFAP45Q9UL16 551 aa17.65■□□□□ 0.42
C9orf3-219ENST00000488186 B4GALT4O60513 344 aa17.64■□□□□ 0.41
C9orf3-219ENST00000488186 OATP04181 439 aa17.64■□□□□ 0.41
C9orf3-219ENST00000488186 INSRRP14616 1297 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms