RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 INF2Q27J81 1249 aa6.9□□□□□ -1.3
BRCA1-217ENST00000487825 MRM1Q6IN84 353 aaKnown RBP6.9□□□□□ -1.3
BRCA1-217ENST00000487825 FRS2Q8WU20 508 aa6.9□□□□□ -1.3
BRCA1-217ENST00000487825 DPF3Q92784 378 aa6.9□□□□□ -1.3
BRCA1-217ENST00000487825 KCNC2Q96PR1 638 aa6.9□□□□□ -1.3
BRCA1-217ENST00000487825 MARCH2Q9P0N8 246 aa6.9□□□□□ -1.3
BRCA1-217ENST00000487825 FAN1Q9Y2M0 1017 aa6.9□□□□□ -1.3
BRCA1-217ENST00000487825 SIT1Q9Y3P8 196 aa6.9□□□□□ -1.3
BRCA1-217ENST00000487825 OVOS2A0A0G2JMS6 1433 aa6.9□□□□□ -1.31
BRCA1-217ENST00000487825 OVOS2A0A0J9YW53 1432 aa6.9□□□□□ -1.31
BRCA1-217ENST00000487825 OVOS2Q6IE36 1432 aa6.9□□□□□ -1.31
BRCA1-217ENST00000487825 ATP7BP35670 1465 aa6.9□□□□□ -1.31
BRCA1-217ENST00000487825 ADAMTS20P59510 1910 aa6.89□□□□□ -1.31
BRCA1-217ENST00000487825 SUSD5O60279 629 aa6.89□□□□□ -1.31
BRCA1-217ENST00000487825 NTRK1P04629 796 aa6.89□□□□□ -1.31
BRCA1-217ENST00000487825 ASGR2P07307 311 aa6.89□□□□□ -1.31
BRCA1-217ENST00000487825 FOXO4P98177 505 aa6.89□□□□□ -1.31
BRCA1-217ENST00000487825 CYP4F3Q08477 520 aa6.89□□□□□ -1.31
BRCA1-217ENST00000487825 WWC2Q6AWC2 1192 aa6.89□□□□□ -1.31
BRCA1-217ENST00000487825 ZNF227Q86WZ6 799 aa6.89□□□□□ -1.31
BRCA1-217ENST00000487825 MCF2L2Q86YR7 1114 aa6.89□□□□□ -1.31
BRCA1-217ENST00000487825 TEX2Q8IWB9 1127 aa6.89□□□□□ -1.31
BRCA1-217ENST00000487825 PEX11GQ96HA9 241 aa6.89□□□□□ -1.31
BRCA1-217ENST00000487825 MMP19Q99542 508 aa6.89□□□□□ -1.31
BRCA1-217ENST00000487825 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.89□□□□□ -1.31
BRCA1-217ENST00000487825 NUDT5Q9UKK9 219 aa6.89□□□□□ -1.31
BRCA1-217ENST00000487825 SSH2Q76I76 1423 aa6.88□□□□□ -1.31
BRCA1-217ENST00000487825 KRTAP9-7A8MTY7 169 aa6.88□□□□□ -1.31
BRCA1-217ENST00000487825 SNRPB2P08579 225 aaKnown RBP6.88□□□□□ -1.31
BRCA1-217ENST00000487825 NCAM1P13591 858 aa6.88□□□□□ -1.31
BRCA1-217ENST00000487825 PMLP29590 882 aa6.88□□□□□ -1.31
BRCA1-217ENST00000487825 CTSWP56202 376 aa6.88□□□□□ -1.31
BRCA1-217ENST00000487825 SF1Q15637 639 aaKnown RBP6.88□□□□□ -1.31
BRCA1-217ENST00000487825 SYT8Q8NBV8 401 aa6.88□□□□□ -1.31
BRCA1-217ENST00000487825 NETO2Q8NC67 525 aa6.88□□□□□ -1.31
BRCA1-217ENST00000487825 C20orf173Q96LM9 149 aa6.88□□□□□ -1.31
BRCA1-217ENST00000487825 ST7Q9NRC1 585 aa6.88□□□□□ -1.31
BRCA1-217ENST00000487825 R3HCC1Q9Y3T6 440 aaKnown RBP6.88□□□□□ -1.31
BRCA1-217ENST00000487825 NHSQ6T4R5 1651 aa6.87□□□□□ -1.31
BRCA1-217ENST00000487825 VPS8Q8N3P4 1428 aa6.87□□□□□ -1.31
BRCA1-217ENST00000487825 DHX57Q6P158 1386 aaKnown RBP6.87□□□□□ -1.31
BRCA1-217ENST00000487825 AATKQ6ZMQ8 1374 aa6.87□□□□□ -1.31
BRCA1-217ENST00000487825 PLEKHH1Q9ULM0 1364 aa6.87□□□□□ -1.31
BRCA1-217ENST00000487825 SASH1O94885 1247 aa6.87□□□□□ -1.31
BRCA1-217ENST00000487825 GJB6O95452 261 aa6.87□□□□□ -1.31
BRCA1-217ENST00000487825 PLA2G1BP04054 148 aaKnown RBP6.87□□□□□ -1.31
BRCA1-217ENST00000487825 KCNJ6P48051 423 aa6.87□□□□□ -1.31
BRCA1-217ENST00000487825 SLC15A2Q16348 729 aa6.87□□□□□ -1.31
BRCA1-217ENST00000487825 PRSS53Q2L4Q9 553 aa6.87□□□□□ -1.31
BRCA1-217ENST00000487825 JMYQ8N9B5 988 aa6.87□□□□□ -1.31
BRCA1-217ENST00000487825 LINC01356Q8N9X3 169 aa6.87□□□□□ -1.31
BRCA1-217ENST00000487825 NPLOC4Q8TAT6 608 aa6.87□□□□□ -1.31
BRCA1-217ENST00000487825 PLEKHO2Q8TD55 490 aa6.87□□□□□ -1.31
BRCA1-217ENST00000487825 HNRNPLLQ8WVV9 542 aaKnown RBP6.87□□□□□ -1.31
BRCA1-217ENST00000487825 TSPAN17Q96FV3 270 aa6.87□□□□□ -1.31
BRCA1-217ENST00000487825 STK32BQ9NY57 414 aa6.87□□□□□ -1.31
BRCA1-217ENST00000487825 RAPGEFL1Q9UHV5 662 aa6.87□□□□□ -1.31
BRCA1-217ENST00000487825 TMEFF2Q9UIK5 374 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-217ENST00000487825 TULP4Q9NRJ4 1543 aa6.86□□□□□ -1.31
BRCA1-217ENST00000487825 OTOL1A6NHN0 477 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-217ENST00000487825 C22orf46C9J442 243 aa6.86□□□□□ -1.31
BRCA1-217ENST00000487825 FFAR3O14843 346 aa6.86□□□□□ -1.31
BRCA1-217ENST00000487825 HOXC12P31275 282 aa6.86□□□□□ -1.31
BRCA1-217ENST00000487825 CCDC103Q8IW40 242 aa6.86□□□□□ -1.31
BRCA1-217ENST00000487825 ZDHHC14Q8IZN3 488 aa6.86□□□□□ -1.31
BRCA1-217ENST00000487825 ADGRG2Q8IZP9 1017 aa6.86□□□□□ -1.31
BRCA1-217ENST00000487825 NLGN1Q8N2Q7 840 aa6.86□□□□□ -1.31
BRCA1-217ENST00000487825 FEZF2Q8TBJ5 459 aa6.86□□□□□ -1.31
BRCA1-217ENST00000487825 RNF38Q9H0F5 515 aa6.86□□□□□ -1.31
BRCA1-217ENST00000487825 PRDM11Q9NQV5 511 aa6.86□□□□□ -1.31
BRCA1-217ENST00000487825 PMF1-BGLAPU3KQ54 211 aa6.86□□□□□ -1.31
BRCA1-217ENST00000487825 ITSN1Q15811 1721 aa6.86□□□□□ -1.31
BRCA1-217ENST00000487825 BCL9O00512 1426 aa6.85□□□□□ -1.31
BRCA1-217ENST00000487825 BTAF1O14981 1849 aa6.85□□□□□ -1.31
BRCA1-217ENST00000487825 KIAA0232Q92628 1395 aa6.85□□□□□ -1.31
BRCA1-217ENST00000487825 KIAA1210Q9ULL0 1709 aa6.85□□□□□ -1.31
BRCA1-217ENST00000487825 A0A0G2JLL6 359 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-217ENST00000487825 ARNTLO00327 626 aa6.85□□□□□ -1.31
BRCA1-217ENST00000487825 FPR2P25090 351 aa6.85□□□□□ -1.31
BRCA1-217ENST00000487825 SLC9A5Q14940 896 aa6.85□□□□□ -1.31
BRCA1-217ENST00000487825 IQCEQ6IPM2 695 aa6.85□□□□□ -1.31
BRCA1-217ENST00000487825 ANKS3Q6ZW76 656 aa6.85□□□□□ -1.31
BRCA1-217ENST00000487825 EEPD1Q7L9B9 569 aa6.85□□□□□ -1.31
BRCA1-217ENST00000487825 TP53I13Q8NBR0 393 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-217ENST00000487825 FNIP1Q8TF40 1166 aa6.85□□□□□ -1.31
BRCA1-217ENST00000487825 DIO2Q92813 273 aa6.85□□□□□ -1.31
BRCA1-217ENST00000487825 XYLT2Q9H1B5 865 aa6.85□□□□□ -1.31
BRCA1-217ENST00000487825 USP35Q9P2H5 1018 aa6.85□□□□□ -1.31
BRCA1-217ENST00000487825 ANKARQ7Z5J8 1434 aa6.84□□□□□ -1.31
BRCA1-217ENST00000487825 NUP155O75694 1391 aa6.84□□□□□ -1.31
BRCA1-217ENST00000487825 ABCC11Q96J66 1382 aa6.84□□□□□ -1.31
BRCA1-217ENST00000487825 A0A1B0GTL3 188 aa6.84□□□□□ -1.31
BRCA1-217ENST00000487825 MEFVO15553 781 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-217ENST00000487825 BCL6P41182 706 aa6.84□□□□□ -1.31
BRCA1-217ENST00000487825 RPL11P62913 178 aaKnown RBP6.84□□□□□ -1.31
BRCA1-217ENST00000487825 CEP68Q76N32 757 aa6.84□□□□□ -1.31
BRCA1-217ENST00000487825 B3GNT8Q7Z7M8 397 aa6.84□□□□□ -1.31
BRCA1-217ENST00000487825 TCP11L2Q8N4U5 519 aa6.84□□□□□ -1.31
BRCA1-217ENST00000487825 CELF2-AS1Q8N7Q2 184 aa6.84□□□□□ -1.31
BRCA1-217ENST00000487825 KREMEN2Q8NCW0 462 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms