RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 LMF1Q96S06 567 aa6.02□□□□□ -1.45
UBR3-211ENST00000487689 ZNF341Q9BYN7 854 aa6.02□□□□□ -1.45
UBR3-211ENST00000487689 CDIP1Q9H305 208 aa6.02□□□□□ -1.45
UBR3-211ENST00000487689 SEC61A2Q9H9S3 476 aa6.02□□□□□ -1.45
UBR3-211ENST00000487689 ARHGEF4Q9NR80 690 aa6.02□□□□□ -1.45
UBR3-211ENST00000487689 RBPJLQ9UBG7 517 aa6.02□□□□□ -1.45
UBR3-211ENST00000487689 ZNF623O75123 536 aa6.01□□□□□ -1.45
UBR3-211ENST00000487689 ST5P78524 1137 aa6.01□□□□□ -1.45
UBR3-211ENST00000487689 PAK1Q13153 545 aa6.01□□□□□ -1.45
UBR3-211ENST00000487689 RAB33AQ14088 237 aa6.01□□□□□ -1.45
UBR3-211ENST00000487689 USP10Q14694 798 aaKnown RBP6.01□□□□□ -1.45
UBR3-211ENST00000487689 SMN1Q16637 294 aaKnown RBP6.01□□□□□ -1.45
UBR3-211ENST00000487689 PHF19Q5T6S3 580 aa6.01□□□□□ -1.45
UBR3-211ENST00000487689 CD276Q5ZPR3 534 aa6.01□□□□□ -1.45
UBR3-211ENST00000487689 CATSPERZQ9NTU4 200 aa6.01□□□□□ -1.45
UBR3-211ENST00000487689 KLF4O43474 513 aa6□□□□□ -1.45
UBR3-211ENST00000487689 CUTAO60888 179 aa6□□□□□ -1.45
UBR3-211ENST00000487689 KLHL18O94889 574 aa6□□□□□ -1.45
UBR3-211ENST00000487689 KNG1P01042 644 aa6□□□□□ -1.45
UBR3-211ENST00000487689 LTFP02788 710 aa6□□□□□ -1.45
UBR3-211ENST00000487689 CAPNS1P04632 268 aa6□□□□□ -1.45
UBR3-211ENST00000487689 RBM25P49756 843 aaKnown RBP6□□□□□ -1.45
UBR3-211ENST00000487689 OSBP2Q969R2 916 aa6□□□□□ -1.45
UBR3-211ENST00000487689 WWC2-AS2Q96NR7 200 aa6□□□□□ -1.45
UBR3-211ENST00000487689 LRRC37BQ96QE4 947 aa6□□□□□ -1.45
UBR3-211ENST00000487689 GMLQ99445 158 aa6□□□□□ -1.45
UBR3-211ENST00000487689 CARD11Q9BXL7 1154 aa6□□□□□ -1.45
UBR3-211ENST00000487689 IPPKQ9H8X2 491 aa6□□□□□ -1.45
UBR3-211ENST00000487689 RIC8BQ9NVN3 520 aa6□□□□□ -1.45
UBR3-211ENST00000487689 BLACEA4D250 179 aa5.99□□□□□ -1.45
UBR3-211ENST00000487689 ZNF839A8K0R7 811 aa5.99□□□□□ -1.45
UBR3-211ENST00000487689 NKRFO15226 690 aaKnown RBP eCLIP5.99□□□□□ -1.45
UBR3-211ENST00000487689 GJA4P35212 333 aa5.99□□□□□ -1.45
UBR3-211ENST00000487689 RAC3P60763 192 aa5.99□□□□□ -1.45
UBR3-211ENST00000487689 MTERF2Q49AM1 385 aa5.99□□□□□ -1.45
UBR3-211ENST00000487689 BTBD8Q5XKL5 378 aa5.99□□□□□ -1.45
UBR3-211ENST00000487689 MAMDC2Q7Z304 686 aaPredicted RBP5.99□□□□□ -1.45
UBR3-211ENST00000487689 ZNF575Q86XF7 245 aa5.99□□□□□ -1.45
UBR3-211ENST00000487689 PROSER1Q86XN7 944 aa5.99□□□□□ -1.45
UBR3-211ENST00000487689 SCUBE1Q8IWY4 988 aa5.99□□□□□ -1.45
UBR3-211ENST00000487689 AJUBAQ96IF1 538 aa5.99□□□□□ -1.45
UBR3-211ENST00000487689 TACO1Q9BSH4 297 aaKnown RBP5.99□□□□□ -1.45
UBR3-211ENST00000487689 SPATA9Q9BWV2 254 aa5.99□□□□□ -1.45
UBR3-211ENST00000487689 WDR26Q9H7D7 661 aa5.99□□□□□ -1.45
UBR3-211ENST00000487689 KCND1Q9NSA2 647 aa5.99□□□□□ -1.45
UBR3-211ENST00000487689 SLC4A7Q9Y6M7 1214 aa5.99□□□□□ -1.45
UBR3-211ENST00000487689 NPIPB8E9PQR5 432 aa5.98□□□□□ -1.45
UBR3-211ENST00000487689 EPHA5P54756 1037 aa5.98□□□□□ -1.45
UBR3-211ENST00000487689 INHBEP58166 350 aa5.98□□□□□ -1.45
UBR3-211ENST00000487689 SUMO1P63165 101 aaKnown RBP5.98□□□□□ -1.45
UBR3-211ENST00000487689 WDR72Q3MJ13 1102 aa5.98□□□□□ -1.45
UBR3-211ENST00000487689 ZMAT1Q5H9K5 638 aa5.98□□□□□ -1.45
UBR3-211ENST00000487689 FAM47CQ5HY64 1035 aa5.98□□□□□ -1.45
UBR3-211ENST00000487689 GPR155Q7Z3F1 870 aa5.98□□□□□ -1.45
UBR3-211ENST00000487689 FBXW5Q969U6 566 aa5.98□□□□□ -1.45
UBR3-211ENST00000487689 CD244Q9BZW8 370 aa5.98□□□□□ -1.45
UBR3-211ENST00000487689 PDGFDQ9GZP0 370 aaPredicted RBP5.98□□□□□ -1.45
UBR3-211ENST00000487689 WASF3Q9UPY6 502 aa5.98□□□□□ -1.45
UBR3-211ENST00000487689 ATP23Q9Y6H3 246 aa5.98□□□□□ -1.45
UBR3-211ENST00000487689 CCDC85CA6NKD9 419 aa5.97□□□□□ -1.45
UBR3-211ENST00000487689 PATE3B3GLJ2 98 aa5.97□□□□□ -1.45
UBR3-211ENST00000487689 PDPK1O15530 556 aa5.97□□□□□ -1.45
UBR3-211ENST00000487689 COL6A1P12109 1028 aa5.97□□□□□ -1.45
UBR3-211ENST00000487689 GUCY1A3Q02108 690 aa5.97□□□□□ -1.45
UBR3-211ENST00000487689 SSRP1Q08945 709 aaKnown RBP5.97□□□□□ -1.45
UBR3-211ENST00000487689 PRKD1Q15139 912 aaPredicted RBP5.97□□□□□ -1.45
UBR3-211ENST00000487689 GPR19Q15760 415 aa5.97□□□□□ -1.45
UBR3-211ENST00000487689 NTRK3Q16288 839 aa5.97□□□□□ -1.45
UBR3-211ENST00000487689 CRY1Q16526 586 aa5.97□□□□□ -1.45
UBR3-211ENST00000487689 ARHGAP36Q6ZRI8 547 aa5.97□□□□□ -1.45
UBR3-211ENST00000487689 PTPRN2Q92932 1015 aa5.97□□□□□ -1.45
UBR3-211ENST00000487689 CHFRQ96EP1 664 aa5.97□□□□□ -1.45
UBR3-211ENST00000487689 SLC39A2Q9NP94 309 aa5.97□□□□□ -1.45
UBR3-211ENST00000487689 TESMINQ9Y4I5 508 aa5.97□□□□□ -1.45
UBR3-211ENST00000487689 TRBV23-1A0A0A0MS06 115 aa5.96□□□□□ -1.46
UBR3-211ENST00000487689 ESYT3A0FGR9 886 aa5.96□□□□□ -1.46
UBR3-211ENST00000487689 CNOT4O95628 575 aaKnown RBP5.96□□□□□ -1.46
UBR3-211ENST00000487689 KRT15P19012 456 aa5.96□□□□□ -1.46
UBR3-211ENST00000487689 POLD1P28340 1107 aa5.96□□□□□ -1.46
UBR3-211ENST00000487689 CSF2RBP32927 897 aa5.96□□□□□ -1.46
UBR3-211ENST00000487689 DBPQ10586 325 aaPredicted RBP5.96□□□□□ -1.46
UBR3-211ENST00000487689 HABP4Q5JVS0 413 aaKnown RBP5.96□□□□□ -1.46
UBR3-211ENST00000487689 YOD1Q5VVQ6 348 aaPredicted RBP5.96□□□□□ -1.46
UBR3-211ENST00000487689 SCYL1Q96KG9 808 aa5.96□□□□□ -1.46
UBR3-211ENST00000487689 PTPN18Q99952 460 aa5.96□□□□□ -1.46
UBR3-211ENST00000487689 FBXO10Q9UK96 956 aa5.96□□□□□ -1.46
UBR3-211ENST00000487689 TRAF6Q9Y4K3 522 aa5.96□□□□□ -1.46
UBR3-211ENST00000487689 PTPN1P18031 435 aaKnown RBP5.95□□□□□ -1.46
UBR3-211ENST00000487689 ATP2B1P20020 1258 aa5.95□□□□□ -1.46
UBR3-211ENST00000487689 FIGNQ5HY92 759 aa5.95□□□□□ -1.46
UBR3-211ENST00000487689 TAX1BP1Q86VP1 789 aa5.95□□□□□ -1.46
UBR3-211ENST00000487689 ZC3H7AQ8IWR0 971 aaKnown RBP5.95□□□□□ -1.46
UBR3-211ENST00000487689 NEIL1Q96FI4 390 aaPredicted RBP5.95□□□□□ -1.46
UBR3-211ENST00000487689 GNRHR2Q96P88 292 aa5.95□□□□□ -1.46
UBR3-211ENST00000487689 KATNBL1Q9H079 304 aa5.95□□□□□ -1.46
UBR3-211ENST00000487689 MEGF9Q9H1U4 602 aa5.95□□□□□ -1.46
UBR3-211ENST00000487689 C12orf65Q9H3J6 166 aaKnown RBP5.95□□□□□ -1.46
UBR3-211ENST00000487689 SRPK3Q9UPE1 567 aa5.95□□□□□ -1.46
UBR3-211ENST00000487689 ZFR2Q9UPR6 939 aaKnown RBP5.95□□□□□ -1.46
UBR3-211ENST00000487689 WDR33Q9C0J8 1336 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms