RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 PHOSPHO2Q8TCD6 241 aa23.2■■□□□ 1.3
HDAC4-209ENST00000487617 MYLIPQ8WY64 445 aa23.2■■□□□ 1.3
HDAC4-209ENST00000487617 TBC1D22BQ9NU19 505 aa23.2■■□□□ 1.3
HDAC4-209ENST00000487617 TRPC6Q9Y210 931 aa23.2■■□□□ 1.3
HDAC4-209ENST00000487617 BACH1O14867 736 aa23.19■■□□□ 1.3
HDAC4-209ENST00000487617 DTNBO60941 627 aa23.19■■□□□ 1.3
HDAC4-209ENST00000487617 IGBP1P78318 339 aa23.19■■□□□ 1.3
HDAC4-209ENST00000487617 NECAB1Q8N987 351 aa23.19■■□□□ 1.3
HDAC4-209ENST00000487617 TBCKQ8TEA7 893 aa23.19■■□□□ 1.3
HDAC4-209ENST00000487617 TNPO1Q92973 898 aaKnown RBP23.19■■□□□ 1.3
HDAC4-209ENST00000487617 TCEAL9Q9UHQ7 104 aa23.19■■□□□ 1.3
HDAC4-209ENST00000487617 TUBE1Q9UJT0 475 aa23.19■■□□□ 1.3
HDAC4-209ENST00000487617 KCNJ14Q9UNX9 436 aa23.19■■□□□ 1.3
HDAC4-209ENST00000487617 PCDHA11Q9Y5I1 949 aa23.19■■□□□ 1.3
HDAC4-209ENST00000487617 RRN3P2A6NIE6 340 aa23.18■■□□□ 1.3
HDAC4-209ENST00000487617 RBAK-RBAKDNI3L0D1 243 aa23.18■■□□□ 1.3
HDAC4-209ENST00000487617 EDIL3O43854 480 aa23.18■■□□□ 1.3
HDAC4-209ENST00000487617 CTDNEP1O95476 244 aa23.18■■□□□ 1.3
HDAC4-209ENST00000487617 INSRRP14616 1297 aa23.18■■□□□ 1.3
HDAC4-209ENST00000487617 MYOGP15173 224 aa23.18■■□□□ 1.3
HDAC4-209ENST00000487617 XBP1P17861 261 aa23.18■■□□□ 1.3
HDAC4-209ENST00000487617 WDR5P61964 334 aaKnown RBP23.18■■□□□ 1.3
HDAC4-209ENST00000487617 PLCB4Q15147 1175 aa23.18■■□□□ 1.3
HDAC4-209ENST00000487617 ME3Q16798 604 aa23.18■■□□□ 1.3
HDAC4-209ENST00000487617 TCTN1Q2MV58 587 aa23.18■■□□□ 1.3
HDAC4-209ENST00000487617 FAM160B1Q5W0V3 765 aa23.18■■□□□ 1.3
HDAC4-209ENST00000487617 MIS18BP1Q6P0N0 1132 aa23.18■■□□□ 1.3
HDAC4-209ENST00000487617 TAF2Q6P1X5 1199 aa23.18■■□□□ 1.3
HDAC4-209ENST00000487617 ABHD15Q6UXT9 468 aa23.18■■□□□ 1.3
HDAC4-209ENST00000487617 RUFY4Q6ZNE9 571 aa23.18■■□□□ 1.3
HDAC4-209ENST00000487617 LENG9Q96B70 501 aa23.18■■□□□ 1.3
HDAC4-209ENST00000487617 SLC28A3Q9HAS3 691 aa23.18■■□□□ 1.3
HDAC4-209ENST00000487617 ORC3Q9UBD5 711 aaPredicted RBP23.18■■□□□ 1.3
HDAC4-209ENST00000487617 TET1Q8NFU7 2136 aa23.17■■□□□ 1.3
HDAC4-209ENST00000487617 IGKV6D-21A0A0A0MT36 114 aa23.17■■□□□ 1.3
HDAC4-209ENST00000487617 ABHD14A-ACY1A0A1B0GW23 586 aa23.17■■□□□ 1.3
HDAC4-209ENST00000487617 MBLAC1A4D2B0 266 aaPredicted RBP23.17■■□□□ 1.3
HDAC4-209ENST00000487617 M0R2N6 131 aa23.17■■□□□ 1.3
HDAC4-209ENST00000487617 LARGE1O95461 756 aa23.17■■□□□ 1.3
HDAC4-209ENST00000487617 IKBKEQ14164 716 aa23.17■■□□□ 1.3
HDAC4-209ENST00000487617 NPY5RQ15761 445 aa23.17■■□□□ 1.3
HDAC4-209ENST00000487617 C8orf34Q49A92 452 aa23.17■■□□□ 1.3
HDAC4-209ENST00000487617 MARCH8Q5T0T0 291 aa23.17■■□□□ 1.3
HDAC4-209ENST00000487617 HERC6Q8IVU3 1022 aa23.17■■□□□ 1.3
HDAC4-209ENST00000487617 POTEB3A0JP26 581 aa23.16■■□□□ 1.3
HDAC4-209ENST00000487617 EFCAB14O75071 495 aa23.16■■□□□ 1.3
HDAC4-209ENST00000487617 SLC26A2P50443 739 aa23.16■■□□□ 1.3
HDAC4-209ENST00000487617 ZNF746Q6NUN9 644 aaPredicted RBP23.16■■□□□ 1.3
HDAC4-209ENST00000487617 POTEBQ6S5H4 581 aa23.16■■□□□ 1.3
HDAC4-209ENST00000487617 RSPH3Q86UC2 560 aa23.16■■□□□ 1.3
HDAC4-209ENST00000487617 CCDC60Q8IWA6 550 aaPredicted RBP23.16■■□□□ 1.3
HDAC4-209ENST00000487617 DBF4BQ8NFT6 615 aa23.16■■□□□ 1.3
HDAC4-209ENST00000487617 WASF1Q92558 559 aa23.16■■□□□ 1.3
HDAC4-209ENST00000487617 GTF3C6Q969F1 213 aa23.16■■□□□ 1.3
HDAC4-209ENST00000487617 PHF20Q9BVI0 1012 aa23.16■■□□□ 1.3
HDAC4-209ENST00000487617 ZNF302Q9NR11 478 aa23.16■■□□□ 1.3
HDAC4-209ENST00000487617 KIF28PB7ZC32 967 aa23.15■■□□□ 1.3
HDAC4-209ENST00000487617 FOSL2P15408 326 aa23.15■■□□□ 1.3
HDAC4-209ENST00000487617 KRT76Q01546 638 aa23.15■■□□□ 1.3
HDAC4-209ENST00000487617 NONOQ15233 471 aaKnown RBP eCLIP23.15■■□□□ 1.3
HDAC4-209ENST00000487617 PLEKHG4Q58EX7 1191 aa23.15■■□□□ 1.3
HDAC4-209ENST00000487617 FAM26DQ5JW98 314 aa23.15■■□□□ 1.3
HDAC4-209ENST00000487617 PPP2R2DQ66LE6 453 aa23.15■■□□□ 1.3
HDAC4-209ENST00000487617 SWSAP1Q6NVH7 229 aa23.15■■□□□ 1.3
HDAC4-209ENST00000487617 PDXDC2PQ6P474 469 aa23.15■■□□□ 1.3
HDAC4-209ENST00000487617 KRT25Q7Z3Z0 450 aa23.15■■□□□ 1.3
HDAC4-209ENST00000487617 RPAINQ86UA6 219 aa23.15■■□□□ 1.3
HDAC4-209ENST00000487617 DNAJB3Q8WWF6 145 aa23.15■■□□□ 1.3
HDAC4-209ENST00000487617 GJB4Q9NTQ9 266 aa23.15■■□□□ 1.3
HDAC4-209ENST00000487617 MSH4O15457 936 aa23.14■■□□□ 1.29
HDAC4-209ENST00000487617 DEFB103AP81534 67 aa23.14■■□□□ 1.29
HDAC4-209ENST00000487617 SMAP1Q8IYB5 467 aaPredicted RBP23.14■■□□□ 1.29
HDAC4-209ENST00000487617 TRAPPC12Q8WVT3 735 aa23.14■■□□□ 1.29
HDAC4-209ENST00000487617 SEPT8Q92599 483 aa23.14■■□□□ 1.29
HDAC4-209ENST00000487617 ZBTB10Q96DT7 871 aa23.14■■□□□ 1.29
HDAC4-209ENST00000487617 OSBPL7Q9BZF2 842 aa23.14■■□□□ 1.29
HDAC4-209ENST00000487617 CCDC194A0A1B0GVG4 234 aa23.13■■□□□ 1.29
HDAC4-209ENST00000487617 HBP1O60381 514 aa23.13■■□□□ 1.29
HDAC4-209ENST00000487617 GAS7O60861 476 aa23.13■■□□□ 1.29
HDAC4-209ENST00000487617 TDP2O95551 362 aa23.13■■□□□ 1.29
HDAC4-209ENST00000487617 CHRNA1P02708 482 aa23.13■■□□□ 1.29
HDAC4-209ENST00000487617 CA3P07451 260 aa23.13■■□□□ 1.29
HDAC4-209ENST00000487617 PSAPP07602 524 aa23.13■■□□□ 1.29
HDAC4-209ENST00000487617 INF2Q27J81 1249 aa23.13■■□□□ 1.29
HDAC4-209ENST00000487617 Q4G0T1 1027 aa23.13■■□□□ 1.29
HDAC4-209ENST00000487617 TMCO2Q7Z6W1 182 aaPredicted RBP23.13■■□□□ 1.29
HDAC4-209ENST00000487617 CKAP2LQ8IYA6 745 aa23.13■■□□□ 1.29
HDAC4-209ENST00000487617 ATP8B4Q8TF62 1192 aa23.13■■□□□ 1.29
HDAC4-209ENST00000487617 ZBED2Q9BTP6 218 aa23.13■■□□□ 1.29
HDAC4-209ENST00000487617 FAM49AQ9H0Q0 323 aaPredicted RBP23.13■■□□□ 1.29
HDAC4-209ENST00000487617 PRDM12Q9H4Q4 367 aa23.13■■□□□ 1.29
HDAC4-209ENST00000487617 SAMM50Q9Y512 469 aa23.13■■□□□ 1.29
HDAC4-209ENST00000487617 PCDHA10Q9Y5I2 948 aa23.13■■□□□ 1.29
HDAC4-209ENST00000487617 CYP3A7-CYP3A51PA0A087WV96 503 aa23.12■■□□□ 1.29
HDAC4-209ENST00000487617 TLL1O43897 1013 aa23.12■■□□□ 1.29
HDAC4-209ENST00000487617 FDPSP14324 419 aaKnown RBP23.12■■□□□ 1.29
HDAC4-209ENST00000487617 CYP3A7P24462 503 aa23.12■■□□□ 1.29
HDAC4-209ENST00000487617 NSUN7Q8NE18 718 aaKnown RBP23.12■■□□□ 1.29
HDAC4-209ENST00000487617 MAFAQ8NHW3 353 aaPredicted RBP23.12■■□□□ 1.29
HDAC4-209ENST00000487617 SLC5A5Q92911 643 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms