RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 UIMC1Q96RL1 719 aa13.02□□□□□ -0.33
SPEN-205ENST00000487496 SLKQ9H2G2 1235 aaPredicted RBP13.02□□□□□ -0.33
SPEN-205ENST00000487496 PCDHA4Q9UN74 947 aa13.02□□□□□ -0.33
SPEN-205ENST00000487496 IGKV6D-21A0A0A0MT36 114 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 MBLAC1A4D2B0 266 aaPredicted RBP13.01□□□□□ -0.33
SPEN-205ENST00000487496 RRN3P2A6NIE6 340 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 CDKL5O76039 1030 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 INSRRP14616 1297 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 STAT5BP51692 787 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 AK2P54819 239 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 DEFB103AP81534 67 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 SETQ01105 290 aaPredicted RBP13.01□□□□□ -0.33
SPEN-205ENST00000487496 IKBKEQ14164 716 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 ANKRD1Q15327 319 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 PRR16Q569H4 304 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 MARCH8Q5T0T0 291 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 PPP2R2DQ66LE6 453 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 TAF2Q6P1X5 1199 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 ABHD15Q6UXT9 468 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 RUFY4Q6ZNE9 571 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 RPAINQ86UA6 219 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 DBF4BQ8NFT6 615 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 LENG9Q96B70 501 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 ZNF577Q9BSK1 485 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 OSBPL7Q9BZF2 842 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 PRDM12Q9H4Q4 367 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 TBC1D22BQ9NU19 505 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 TUBE1Q9UJT0 475 aa13.01□□□□□ -0.33
SPEN-205ENST00000487496 KIF28PB7ZC32 967 aa13□□□□□ -0.33
SPEN-205ENST00000487496 EFCAB14O75071 495 aa13□□□□□ -0.33
SPEN-205ENST00000487496 CA3P07451 260 aa13□□□□□ -0.33
SPEN-205ENST00000487496 SLC26A2P50443 739 aa13□□□□□ -0.33
SPEN-205ENST00000487496 USP11P51784 963 aa13□□□□□ -0.33
SPEN-205ENST00000487496 IGBP1P78318 339 aa13□□□□□ -0.33
SPEN-205ENST00000487496 PLCB4Q15147 1175 aa13□□□□□ -0.33
SPEN-205ENST00000487496 NPY5RQ15761 445 aa13□□□□□ -0.33
SPEN-205ENST00000487496 PLEKHG4Q58EX7 1191 aa13□□□□□ -0.33
SPEN-205ENST00000487496 FAM26DQ5JW98 314 aa13□□□□□ -0.33
SPEN-205ENST00000487496 TMCO2Q7Z6W1 182 aaPredicted RBP13□□□□□ -0.33
SPEN-205ENST00000487496 BLIDQ8IZY5 108 aa13□□□□□ -0.33
SPEN-205ENST00000487496 FAM177A1Q8N128 213 aaPredicted RBP13□□□□□ -0.33
SPEN-205ENST00000487496 DAGLBQ8NCG7 672 aa13□□□□□ -0.33
SPEN-205ENST00000487496 MAFAQ8NHW3 353 aaPredicted RBP13□□□□□ -0.33
SPEN-205ENST00000487496 TNPO1Q92973 898 aaKnown RBP13□□□□□ -0.33
SPEN-205ENST00000487496 TRPC6Q9Y210 931 aa13□□□□□ -0.33
SPEN-205ENST00000487496 CDH23Q9H251 3354 aa12.99□□□□□ -0.33
SPEN-205ENST00000487496 STK36Q9NRP7 1315 aa12.99□□□□□ -0.33
SPEN-205ENST00000487496 M0R2N6 131 aa12.99□□□□□ -0.33
SPEN-205ENST00000487496 BACH1O14867 736 aa12.99□□□□□ -0.33
SPEN-205ENST00000487496 DTNBO60941 627 aa12.99□□□□□ -0.33
SPEN-205ENST00000487496 CTDNEP1O95476 244 aa12.99□□□□□ -0.33
SPEN-205ENST00000487496 CHRNA1P02708 482 aa12.99□□□□□ -0.33
SPEN-205ENST00000487496 MKRN4PQ13434 485 aaPredicted RBP12.99□□□□□ -0.33
SPEN-205ENST00000487496 ME3Q16798 604 aa12.99□□□□□ -0.33
SPEN-205ENST00000487496 GALNT17Q6IS24 598 aa12.99□□□□□ -0.33
SPEN-205ENST00000487496 ZNF746Q6NUN9 644 aaPredicted RBP12.99□□□□□ -0.33
SPEN-205ENST00000487496 SWSAP1Q6NVH7 229 aa12.99□□□□□ -0.33
SPEN-205ENST00000487496 MIS18BP1Q6P0N0 1132 aa12.99□□□□□ -0.33
SPEN-205ENST00000487496 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.99□□□□□ -0.33
SPEN-205ENST00000487496 CCDC60Q8IWA6 550 aaPredicted RBP12.99□□□□□ -0.33
SPEN-205ENST00000487496 TBCKQ8TEA7 893 aa12.99□□□□□ -0.33
SPEN-205ENST00000487496 DNAJB3Q8WWF6 145 aa12.99□□□□□ -0.33
SPEN-205ENST00000487496 SEPT8Q92599 483 aa12.99□□□□□ -0.33
SPEN-205ENST00000487496 ZBTB10Q96DT7 871 aa12.99□□□□□ -0.33
SPEN-205ENST00000487496 GAS2L1Q99501 681 aaPredicted RBP12.99□□□□□ -0.33
SPEN-205ENST00000487496 C22orf23Q9BZE7 217 aa12.99□□□□□ -0.33
SPEN-205ENST00000487496 KCNJ14Q9UNX9 436 aa12.99□□□□□ -0.33
SPEN-205ENST00000487496 COL6A3P12111 3177 aa12.99□□□□□ -0.33
SPEN-205ENST00000487496 GBF1Q92538 1859 aa12.98□□□□□ -0.33
SPEN-205ENST00000487496 POTEB3A0JP26 581 aa12.98□□□□□ -0.33
SPEN-205ENST00000487496 MSH4O15457 936 aa12.98□□□□□ -0.33
SPEN-205ENST00000487496 TLL1O43897 1013 aa12.98□□□□□ -0.33
SPEN-205ENST00000487496 GJB5O95377 273 aa12.98□□□□□ -0.33
SPEN-205ENST00000487496 NEK4P51957 841 aa12.98□□□□□ -0.33
SPEN-205ENST00000487496 MGAT3Q09327 533 aa12.98□□□□□ -0.33
SPEN-205ENST00000487496 ADGRE1Q14246 886 aa12.98□□□□□ -0.33
SPEN-205ENST00000487496 FAM160B1Q5W0V3 765 aa12.98□□□□□ -0.33
SPEN-205ENST00000487496 POTEBQ6S5H4 581 aa12.98□□□□□ -0.33
SPEN-205ENST00000487496 RSPH3Q86UC2 560 aa12.98□□□□□ -0.33
SPEN-205ENST00000487496 SMAP1Q8IYB5 467 aaPredicted RBP12.98□□□□□ -0.33
SPEN-205ENST00000487496 NECAB1Q8N987 351 aa12.98□□□□□ -0.33
SPEN-205ENST00000487496 ATP8B4Q8TF62 1192 aa12.98□□□□□ -0.33
SPEN-205ENST00000487496 TRAPPC12Q8WVT3 735 aa12.98□□□□□ -0.33
SPEN-205ENST00000487496 ZBED2Q9BTP6 218 aa12.98□□□□□ -0.33
SPEN-205ENST00000487496 FAM49AQ9H0Q0 323 aaPredicted RBP12.98□□□□□ -0.33
SPEN-205ENST00000487496 ZNF302Q9NR11 478 aa12.98□□□□□ -0.33
SPEN-205ENST00000487496 KAT6AQ92794 2004 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 CYP3A7-CYP3A51PA0A087WV96 503 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 LCHNA4D1U4 455 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 HBP1O60381 514 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 ARHGEF15O94989 841 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 AMHP03971 560 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 RPLP2P05387 115 aaKnown RBP12.97□□□□□ -0.33
SPEN-205ENST00000487496 ATP4AP20648 1035 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 CYP3A7P24462 503 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 KRT76Q01546 638 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 TAP1Q03518 808 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 Q4G0T1 1027 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 PDXDC2PQ6P474 469 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 SLC5A5Q92911 643 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms