RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 RRN3P2A6NIE6 340 aa13.94□□□□□ -0.18
VPS16-208ENST00000487461 GOLGA8AA7E2F4 631 aa13.94□□□□□ -0.18
VPS16-208ENST00000487461 GOLGA8BA8MQT2 603 aa13.94□□□□□ -0.18
VPS16-208ENST00000487461 MEIS1O00470 390 aa13.94□□□□□ -0.18
VPS16-208ENST00000487461 ENPP3O14638 875 aa13.94□□□□□ -0.18
VPS16-208ENST00000487461 CDC45O75419 566 aa13.94□□□□□ -0.18
VPS16-208ENST00000487461 FOSP01100 380 aaPredicted RBP13.94□□□□□ -0.18
VPS16-208ENST00000487461 CPA1P15085 419 aa13.94□□□□□ -0.18
VPS16-208ENST00000487461 ADD1P35611 737 aaKnown RBP13.94□□□□□ -0.18
VPS16-208ENST00000487461 ADCY7P51828 1080 aa13.94□□□□□ -0.18
VPS16-208ENST00000487461 ACTR2P61160 394 aa13.94□□□□□ -0.18
VPS16-208ENST00000487461 ITGB3BPQ13352 177 aaPredicted RBP13.94□□□□□ -0.18
VPS16-208ENST00000487461 CEP55Q53EZ4 464 aa13.94□□□□□ -0.18
VPS16-208ENST00000487461 PPP1R18Q6NYC8 613 aa13.94□□□□□ -0.18
VPS16-208ENST00000487461 RSPH3Q86UC2 560 aa13.94□□□□□ -0.18
VPS16-208ENST00000487461 TEX2Q8IWB9 1127 aa13.94□□□□□ -0.18
VPS16-208ENST00000487461 KAT6AQ92794 2004 aa13.94□□□□□ -0.18
VPS16-208ENST00000487461 SAMD11Q96NU1 681 aa13.94□□□□□ -0.18
VPS16-208ENST00000487461 ANO3Q9BYT9 981 aa13.94□□□□□ -0.18
VPS16-208ENST00000487461 AGO4Q9HCK5 861 aaKnown RBP13.94□□□□□ -0.18
VPS16-208ENST00000487461 CDY2AQ9Y6F7 541 aa13.94□□□□□ -0.18
VPS16-208ENST00000487461 BRWD1Q9NSI6 2320 aa13.93□□□□□ -0.18
VPS16-208ENST00000487461 NFASCO94856 1347 aa13.93□□□□□ -0.18
VPS16-208ENST00000487461 BDP1A6H8Y1 2624 aa13.93□□□□□ -0.18
VPS16-208ENST00000487461 H3BNC9 293 aa13.93□□□□□ -0.18
VPS16-208ENST00000487461 ATG7O95352 703 aa13.93□□□□□ -0.18
VPS16-208ENST00000487461 CLK2P49760 499 aaKnown RBP13.93□□□□□ -0.18
VPS16-208ENST00000487461 GPM6BQ13491 265 aa13.93□□□□□ -0.18
VPS16-208ENST00000487461 KRT32Q14532 448 aa13.93□□□□□ -0.18
VPS16-208ENST00000487461 PLCB4Q15147 1175 aa13.93□□□□□ -0.18
VPS16-208ENST00000487461 FBXO47Q5MNV8 452 aa13.93□□□□□ -0.18
VPS16-208ENST00000487461 PLPPR4Q7Z2D5 763 aa13.93□□□□□ -0.18
VPS16-208ENST00000487461 TMEM192Q8IY95 271 aa13.93□□□□□ -0.18
VPS16-208ENST00000487461 KCNB2Q92953 911 aa13.93□□□□□ -0.18
VPS16-208ENST00000487461 MRPL38Q96DV4 380 aaKnown RBP13.93□□□□□ -0.18
VPS16-208ENST00000487461 IL17RAQ96F46 866 aa13.93□□□□□ -0.18
VPS16-208ENST00000487461 SDF4Q9BRK5 362 aa13.93□□□□□ -0.18
VPS16-208ENST00000487461 AZI2Q9H6S1 392 aa13.93□□□□□ -0.18
VPS16-208ENST00000487461 AGO3Q9H9G7 860 aaKnown RBP13.93□□□□□ -0.18
VPS16-208ENST00000487461 COL4A4P53420 1690 aaPredicted RBP13.92□□□□□ -0.18
VPS16-208ENST00000487461 hCG_1984214I3L0E3 225 aa13.92□□□□□ -0.18
VPS16-208ENST00000487461 ADAMTS3O15072 1205 aa13.92□□□□□ -0.18
VPS16-208ENST00000487461 HMGB1P09429 215 aaKnown RBP13.92□□□□□ -0.18
VPS16-208ENST00000487461 COL9A1P20849 921 aa13.92□□□□□ -0.18
VPS16-208ENST00000487461 SREBF1P36956 1147 aa13.92□□□□□ -0.18
VPS16-208ENST00000487461 STAT5BP51692 787 aa13.92□□□□□ -0.18
VPS16-208ENST00000487461 RCAN1P53805 252 aa13.92□□□□□ -0.18
VPS16-208ENST00000487461 MRPS6P82932 125 aaKnown RBP13.92□□□□□ -0.18
VPS16-208ENST00000487461 APOBRQ0VD83 1088 aa13.92□□□□□ -0.18
VPS16-208ENST00000487461 JAKMIP3Q5VZ66 844 aa13.92□□□□□ -0.18
VPS16-208ENST00000487461 RTN4RL1Q86UN2 441 aaPredicted RBP13.92□□□□□ -0.18
VPS16-208ENST00000487461 ZNF713Q8N859 430 aaPredicted RBP13.92□□□□□ -0.18
VPS16-208ENST00000487461 TRAPPC12Q8WVT3 735 aa13.92□□□□□ -0.18
VPS16-208ENST00000487461 FAM49AQ9H0Q0 323 aaPredicted RBP13.92□□□□□ -0.18
VPS16-208ENST00000487461 UBE2ZQ9H832 354 aaPredicted RBP13.92□□□□□ -0.18
VPS16-208ENST00000487461 NAP1L2Q9ULW6 460 aaPredicted RBP13.92□□□□□ -0.18
VPS16-208ENST00000487461 TRPC6Q9Y210 931 aa13.92□□□□□ -0.18
VPS16-208ENST00000487461 FAM86B1E9PN63 330 aa13.91□□□□□ -0.18
VPS16-208ENST00000487461 CCNE2O96020 404 aa13.91□□□□□ -0.18
VPS16-208ENST00000487461 FAM86B2P0C5J1 330 aa13.91□□□□□ -0.18
VPS16-208ENST00000487461 LINC00271P0C7V0 271 aa13.91□□□□□ -0.18
VPS16-208ENST00000487461 CD52P31358 61 aa13.91□□□□□ -0.18
VPS16-208ENST00000487461 ZNF76P36508 570 aa13.91□□□□□ -0.18
VPS16-208ENST00000487461 AP3B2Q13367 1082 aa13.91□□□□□ -0.18
VPS16-208ENST00000487461 PTPROQ16827 1216 aa13.91□□□□□ -0.18
VPS16-208ENST00000487461 PFKFB3Q16875 520 aaPredicted RBP13.91□□□□□ -0.18
VPS16-208ENST00000487461 TSHZ1Q6ZSZ6 1077 aa13.91□□□□□ -0.18
VPS16-208ENST00000487461 Q6ZUG5 572 aa13.91□□□□□ -0.18
VPS16-208ENST00000487461 FIBCD1Q8N539 461 aa13.91□□□□□ -0.18
VPS16-208ENST00000487461 GLT8D2Q9H1C3 349 aa13.91□□□□□ -0.18
VPS16-208ENST00000487461 PCDHA2Q9Y5H9 948 aa13.91□□□□□ -0.18
VPS16-208ENST00000487461 SIP14410 1827 aa13.91□□□□□ -0.18
VPS16-208ENST00000487461 IGKV6D-21A0A0A0MT36 114 aa13.9□□□□□ -0.18
VPS16-208ENST00000487461 POTEB3A0JP26 581 aa13.9□□□□□ -0.18
VPS16-208ENST00000487461 DDX39AO00148 427 aaKnown RBP13.9□□□□□ -0.18
VPS16-208ENST00000487461 DHX15O43143 795 aaKnown RBP13.9□□□□□ -0.18
VPS16-208ENST00000487461 SCG2P13521 617 aa13.9□□□□□ -0.18
VPS16-208ENST00000487461 HSPA4P34932 840 aa13.9□□□□□ -0.18
VPS16-208ENST00000487461 BMPR1AP36894 532 aa13.9□□□□□ -0.18
VPS16-208ENST00000487461 METAP2P50579 478 aaKnown RBP eCLIP13.9□□□□□ -0.18
VPS16-208ENST00000487461 FGD1P98174 961 aa13.9□□□□□ -0.18
VPS16-208ENST00000487461 TMEM62Q0P6H9 643 aa13.9□□□□□ -0.18
VPS16-208ENST00000487461 PKN1Q16512 942 aa13.9□□□□□ -0.18
VPS16-208ENST00000487461 IER5Q5VY09 327 aa13.9□□□□□ -0.18
VPS16-208ENST00000487461 POTEBQ6S5H4 581 aa13.9□□□□□ -0.18
VPS16-208ENST00000487461 MTHFD1LQ6UB35 978 aa13.9□□□□□ -0.18
VPS16-208ENST00000487461 ABHD15Q6UXT9 468 aa13.9□□□□□ -0.18
VPS16-208ENST00000487461 NIPA1Q7RTP0 329 aa13.9□□□□□ -0.18
VPS16-208ENST00000487461 PLA2G4DQ86XP0 818 aa13.9□□□□□ -0.18
VPS16-208ENST00000487461 BANK1Q8NDB2 785 aa13.9□□□□□ -0.18
VPS16-208ENST00000487461 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.9□□□□□ -0.18
VPS16-208ENST00000487461 CRYGNQ8WXF5 182 aa13.9□□□□□ -0.18
VPS16-208ENST00000487461 LINC01599Q8WXQ3 324 aa13.9□□□□□ -0.18
VPS16-208ENST00000487461 TNPO1Q92973 898 aaKnown RBP13.9□□□□□ -0.18
VPS16-208ENST00000487461 ZNF689Q96CS4 500 aaPredicted RBP13.9□□□□□ -0.18
VPS16-208ENST00000487461 JAKMIP1Q96N16 626 aaKnown RBP13.9□□□□□ -0.18
VPS16-208ENST00000487461 UIMC1Q96RL1 719 aa13.9□□□□□ -0.18
VPS16-208ENST00000487461 EPHX3Q9H6B9 360 aa13.9□□□□□ -0.18
VPS16-208ENST00000487461 RC3H2Q9HBD1 1191 aaKnown RBP13.9□□□□□ -0.18
VPS16-208ENST00000487461 RAPGEFL1Q9UHV5 662 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms