RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 TDP2O95551 362 aa25.37■■□□□ 1.65
CDHR3-212ENST00000487084 CTSHP09668 335 aa25.37■■□□□ 1.65
CDHR3-212ENST00000487084 FAM160B1Q5W0V3 765 aa25.37■■□□□ 1.65
CDHR3-212ENST00000487084 MIS18BP1Q6P0N0 1132 aa25.37■■□□□ 1.65
CDHR3-212ENST00000487084 OXER1Q8TDS5 423 aa25.37■■□□□ 1.65
CDHR3-212ENST00000487084 RSPH10B2B2RC85 870 aa25.36■■□□□ 1.65
CDHR3-212ENST00000487084 MSH4O15457 936 aa25.36■■□□□ 1.65
CDHR3-212ENST00000487084 NBNO60934 754 aa25.36■■□□□ 1.65
CDHR3-212ENST00000487084 ATG7O95352 703 aa25.36■■□□□ 1.65
CDHR3-212ENST00000487084 PARNO95453 639 aaKnown RBP25.36■■□□□ 1.65
CDHR3-212ENST00000487084 RSPH10BP0C881 870 aa25.36■■□□□ 1.65
CDHR3-212ENST00000487084 KRT76Q01546 638 aa25.36■■□□□ 1.65
CDHR3-212ENST00000487084 PLCB4Q15147 1175 aa25.36■■□□□ 1.65
CDHR3-212ENST00000487084 ZNF746Q6NUN9 644 aaPredicted RBP25.36■■□□□ 1.65
CDHR3-212ENST00000487084 TRAF7Q6Q0C0 670 aa25.36■■□□□ 1.65
CDHR3-212ENST00000487084 ABHD15Q6UXT9 468 aa25.36■■□□□ 1.65
CDHR3-212ENST00000487084 PIK3AP1Q6ZUJ8 805 aa25.36■■□□□ 1.65
CDHR3-212ENST00000487084 PLPPR4Q7Z2D5 763 aa25.36■■□□□ 1.65
CDHR3-212ENST00000487084 BRMS1Q9HCU9 246 aa25.36■■□□□ 1.65
CDHR3-212ENST00000487084 ZNF302Q9NR11 478 aa25.36■■□□□ 1.65
CDHR3-212ENST00000487084 TUBE1Q9UJT0 475 aa25.36■■□□□ 1.65
CDHR3-212ENST00000487084 SAMM50Q9Y512 469 aa25.36■■□□□ 1.65
CDHR3-212ENST00000487084 RBAK-RBAKDNI3L0D1 243 aa25.35■■□□□ 1.65
CDHR3-212ENST00000487084 GAS7O60861 476 aa25.35■■□□□ 1.65
CDHR3-212ENST00000487084 DNAJB2P25686 324 aa25.35■■□□□ 1.65
CDHR3-212ENST00000487084 KRT2P35908 639 aa25.35■■□□□ 1.65
CDHR3-212ENST00000487084 ADAM17P78536 824 aa25.35■■□□□ 1.65
CDHR3-212ENST00000487084 TRIM29Q14134 588 aa25.35■■□□□ 1.65
CDHR3-212ENST00000487084 GPNMBQ14956 572 aa25.35■■□□□ 1.65
CDHR3-212ENST00000487084 LETM2Q2VYF4 491 aa25.35■■□□□ 1.65
CDHR3-212ENST00000487084 SWSAP1Q6NVH7 229 aa25.35■■□□□ 1.65
CDHR3-212ENST00000487084 RUFY4Q6ZNE9 571 aa25.35■■□□□ 1.65
CDHR3-212ENST00000487084 CCDC60Q8IWA6 550 aaPredicted RBP25.35■■□□□ 1.65
CDHR3-212ENST00000487084 GJA10Q969M2 543 aa25.35■■□□□ 1.65
CDHR3-212ENST00000487084 ZSCAN31Q96LW9 406 aaPredicted RBP25.35■■□□□ 1.65
CDHR3-212ENST00000487084 LAMA2P24043 3122 aaKnown RBP25.34■■□□□ 1.65
CDHR3-212ENST00000487084 POTEB3A0JP26 581 aa25.34■■□□□ 1.65
CDHR3-212ENST00000487084 CHMP2AO43633 222 aa25.34■■□□□ 1.65
CDHR3-212ENST00000487084 INSRRP14616 1297 aa25.34■■□□□ 1.65
CDHR3-212ENST00000487084 RABEP1Q15276 862 aa25.34■■□□□ 1.65
CDHR3-212ENST00000487084 Q4G0T1 1027 aa25.34■■□□□ 1.65
CDHR3-212ENST00000487084 PDXDC2PQ6P474 469 aa25.34■■□□□ 1.65
CDHR3-212ENST00000487084 POTEBQ6S5H4 581 aa25.34■■□□□ 1.65
CDHR3-212ENST00000487084 TNPO1Q92973 898 aaKnown RBP25.34■■□□□ 1.65
CDHR3-212ENST00000487084 DDX25Q9UHL0 483 aaKnown RBP25.34■■□□□ 1.65
CDHR3-212ENST00000487084 IGKV6D-21A0A0A0MT36 114 aa25.33■■□□□ 1.65
CDHR3-212ENST00000487084 RRN3P2A6NIE6 340 aa25.33■■□□□ 1.65
CDHR3-212ENST00000487084 ATP2A2P16615 1042 aaKnown RBP25.33■■□□□ 1.65
CDHR3-212ENST00000487084 PBX2P40425 430 aa25.33■■□□□ 1.65
CDHR3-212ENST00000487084 SLC26A2P50443 739 aa25.33■■□□□ 1.65
CDHR3-212ENST00000487084 MBTPS1Q14703 1052 aa25.33■■□□□ 1.65
CDHR3-212ENST00000487084 LRCH2Q5VUJ6 765 aa25.33■■□□□ 1.65
CDHR3-212ENST00000487084 NEK8Q86SG6 692 aa25.33■■□□□ 1.65
CDHR3-212ENST00000487084 CKAP2LQ8IYA6 745 aa25.33■■□□□ 1.65
CDHR3-212ENST00000487084 SMAP1Q8IYB5 467 aaPredicted RBP25.33■■□□□ 1.65
CDHR3-212ENST00000487084 TIFAQ96CG3 184 aa25.33■■□□□ 1.65
CDHR3-212ENST00000487084 ZBTB10Q96DT7 871 aa25.33■■□□□ 1.65
CDHR3-212ENST00000487084 TEKT3Q9BXF9 490 aa25.33■■□□□ 1.65
CDHR3-212ENST00000487084 PBX4Q9BYU1 374 aa25.33■■□□□ 1.65
CDHR3-212ENST00000487084 MTMR10Q9NXD2 777 aa25.33■■□□□ 1.65
CDHR3-212ENST00000487084 CYP3A7-CYP3A51PA0A087WV96 503 aa25.32■■□□□ 1.64
CDHR3-212ENST00000487084 CAND2O75155 1236 aa25.32■■□□□ 1.64
CDHR3-212ENST00000487084 CXCL10P02778 98 aa25.32■■□□□ 1.64
CDHR3-212ENST00000487084 PSAPP07602 524 aa25.32■■□□□ 1.64
CDHR3-212ENST00000487084 CYP3A7P24462 503 aa25.32■■□□□ 1.64
CDHR3-212ENST00000487084 NR5A1Q13285 461 aa25.32■■□□□ 1.64
CDHR3-212ENST00000487084 TAF2Q6P1X5 1199 aa25.32■■□□□ 1.64
CDHR3-212ENST00000487084 CNKSR3Q6P9H4 555 aa25.32■■□□□ 1.64
CDHR3-212ENST00000487084 MOXD1Q6UVY6 613 aa25.32■■□□□ 1.64
CDHR3-212ENST00000487084 TRMT1LQ7Z2T5 733 aaKnown RBP25.32■■□□□ 1.64
CDHR3-212ENST00000487084 TRAPPC12Q8WVT3 735 aa25.32■■□□□ 1.64
CDHR3-212ENST00000487084 SLC5A5Q92911 643 aa25.32■■□□□ 1.64
CDHR3-212ENST00000487084 RIT2Q99578 217 aa25.32■■□□□ 1.64
CDHR3-212ENST00000487084 SH2B1Q9NRF2 756 aaPredicted RBP25.32■■□□□ 1.64
CDHR3-212ENST00000487084 MSRAQ9UJ68 235 aa25.32■■□□□ 1.64
CDHR3-212ENST00000487084 PCDHA10Q9Y5I2 948 aa25.32■■□□□ 1.64
CDHR3-212ENST00000487084 WDR64B1ANS9 1081 aa25.31■■□□□ 1.64
CDHR3-212ENST00000487084 BAIAP3O94812 1187 aa25.31■■□□□ 1.64
CDHR3-212ENST00000487084 KCNJ6P48051 423 aa25.31■■□□□ 1.64
CDHR3-212ENST00000487084 RABGGTBP53611 331 aa25.31■■□□□ 1.64
CDHR3-212ENST00000487084 MARCH8Q5T0T0 291 aa25.31■■□□□ 1.64
CDHR3-212ENST00000487084 RSPH3Q86UC2 560 aa25.31■■□□□ 1.64
CDHR3-212ENST00000487084 FAM49AQ9H0Q0 323 aaPredicted RBP25.31■■□□□ 1.64
CDHR3-212ENST00000487084 GABBR1Q9UBS5 961 aa25.31■■□□□ 1.64
CDHR3-212ENST00000487084 KAT6AQ92794 2004 aa25.3■■□□□ 1.64
CDHR3-212ENST00000487084 TET1Q8NFU7 2136 aa25.3■■□□□ 1.64
CDHR3-212ENST00000487084 MBLAC1A4D2B0 266 aaPredicted RBP25.3■■□□□ 1.64
CDHR3-212ENST00000487084 SLC37A4O43826 429 aa25.3■■□□□ 1.64
CDHR3-212ENST00000487084 ST18O60284 1047 aa25.3■■□□□ 1.64
CDHR3-212ENST00000487084 CCNT1O60563 726 aaKnown RBP25.3■■□□□ 1.64
CDHR3-212ENST00000487084 MMP1P03956 469 aa25.3■■□□□ 1.64
CDHR3-212ENST00000487084 RAB30Q15771 203 aa25.3■■□□□ 1.64
CDHR3-212ENST00000487084 EARS2Q5JPH6 523 aaKnown RBP25.3■■□□□ 1.64
CDHR3-212ENST00000487084 KRT40Q6A162 431 aa25.3■■□□□ 1.64
CDHR3-212ENST00000487084 ATP8B4Q8TF62 1192 aa25.3■■□□□ 1.64
CDHR3-212ENST00000487084 DNAJB3Q8WWF6 145 aa25.3■■□□□ 1.64
CDHR3-212ENST00000487084 LLPHQ9BRT6 129 aaKnown RBP25.3■■□□□ 1.64
CDHR3-212ENST00000487084 TTYH1Q9H313 450 aaPredicted RBP25.3■■□□□ 1.64
CDHR3-212ENST00000487084 SEMA6BQ9H3T3 888 aa25.3■■□□□ 1.64
CDHR3-212ENST00000487084 UNC45AQ9H3U1 944 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms