RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 GADL1Q6ZQY3 521 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 EPM2AIP1Q7L775 607 aaPredicted RBP12.91□□□□□ -0.34
PRKCB-207ENST00000486868 TPH2Q8IWU9 490 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 OPTNQ96CV9 577 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 SLC10A4Q96EP9 437 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 CCDC51Q96ER9 411 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 CLMNQ96JQ2 1002 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 ZNF830Q96NB3 372 aaPredicted RBP12.91□□□□□ -0.34
PRKCB-207ENST00000486868 BHMT2Q9H2M3 363 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 ANKEF1Q9NU02 776 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 BTBD7Q9P203 1132 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 PNMA3Q9UL41 463 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 MAPK8IP1Q9UQF2 711 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 LOC285556D6RIA3 1793 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 SMCHD1A6NHR9 2005 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 POLR2AP24928 1970 aaKnown RBP12.9□□□□□ -0.34
PRKCB-207ENST00000486868 LGALS16A8MUM7 142 aa12.9□□□□□ -0.34
PRKCB-207ENST00000486868 SPATA31C2B4DYI2 1134 aa12.9□□□□□ -0.34
PRKCB-207ENST00000486868 N4BP3O15049 544 aa12.9□□□□□ -0.34
PRKCB-207ENST00000486868 EIF3DO15371 548 aaKnown RBP eCLIP12.9□□□□□ -0.34
PRKCB-207ENST00000486868 MYCLP12524 364 aaPredicted RBP12.9□□□□□ -0.34
PRKCB-207ENST00000486868 DNM2P50570 870 aa12.9□□□□□ -0.34
PRKCB-207ENST00000486868 MARSP56192 900 aaKnown RBP12.9□□□□□ -0.34
PRKCB-207ENST00000486868 PSMC5P62195 406 aa12.9□□□□□ -0.34
PRKCB-207ENST00000486868 FKBP3Q00688 224 aaKnown RBP12.9□□□□□ -0.34
PRKCB-207ENST00000486868 CYP4A11Q02928 519 aa12.9□□□□□ -0.34
PRKCB-207ENST00000486868 CTTNQ14247 550 aaKnown RBP12.9□□□□□ -0.34
PRKCB-207ENST00000486868 STXBP2Q15833 593 aa12.9□□□□□ -0.34
PRKCB-207ENST00000486868 NFIL3Q16649 462 aa12.9□□□□□ -0.34
PRKCB-207ENST00000486868 GPAT2Q6NUI2 795 aa12.9□□□□□ -0.34
PRKCB-207ENST00000486868 ARMCX5Q6P1M9 558 aa12.9□□□□□ -0.34
PRKCB-207ENST00000486868 DLK2Q6UY11 383 aa12.9□□□□□ -0.34
PRKCB-207ENST00000486868 STXBP4Q6ZWJ1 553 aa12.9□□□□□ -0.34
PRKCB-207ENST00000486868 CNKSR2Q8WXI2 1034 aa12.9□□□□□ -0.34
PRKCB-207ENST00000486868 MPHOSPH6Q99547 160 aaKnown RBP12.9□□□□□ -0.34
PRKCB-207ENST00000486868 REEP2Q9BRK0 252 aa12.9□□□□□ -0.34
PRKCB-207ENST00000486868 LXNQ9BS40 222 aa12.9□□□□□ -0.34
PRKCB-207ENST00000486868 TRAF3IP3Q9Y228 551 aa12.9□□□□□ -0.34
PRKCB-207ENST00000486868 A0A0G2JMZ2 1700 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 TRIM49BA6NDI0 452 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 CCP110O43303 1012 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 STX10O60499 249 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 TBCAO75347 108 aaKnown RBP12.89□□□□□ -0.35
PRKCB-207ENST00000486868 OFD1O75665 1012 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 CNMDO75829 334 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 TGFB3P10600 412 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 SKILP12757 684 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 KCNA2P16389 499 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 LRMPQ12912 555 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 ALCAMQ13740 583 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 PLS1Q14651 629 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.89□□□□□ -0.35
PRKCB-207ENST00000486868 ANKRD35Q8N283 1001 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 FAM133AQ8N9E0 248 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 RETREG2Q8NC44 543 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 SLC17A8Q8NDX2 589 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 ZNF507Q8TCN5 953 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 PANX2Q96RD6 677 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 NUP58Q9BVL2 599 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 RUSC1Q9BVN2 902 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 NAA15Q9BXJ9 866 aaKnown RBP12.89□□□□□ -0.35
PRKCB-207ENST00000486868 MOV10L1Q9BXT6 1211 aaKnown RBP12.89□□□□□ -0.35
PRKCB-207ENST00000486868 KCTD10Q9H3F6 313 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 MROH8Q9H579 483 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 PYCARDQ9ULZ3 195 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 PCDHA10Q9Y5I2 948 aa12.89□□□□□ -0.35
PRKCB-207ENST00000486868 RBBP6Q7Z6E9 1792 aaKnown RBP12.89□□□□□ -0.35
PRKCB-207ENST00000486868 TESPA1A2RU30 521 aaPredicted RBP12.88□□□□□ -0.35
PRKCB-207ENST00000486868 ARHGEF35A5YM69 484 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 POTEB2H3BUK9 544 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 PDXKO00764 312 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 SOCS7O14512 581 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 TEX33O43247 280 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 CHMP2AO43633 222 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 TUBB4AP04350 444 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 TPM1P09493 284 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 CETPP11597 493 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 FECHP22830 423 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 ALDH5A1P51649 535 aaPredicted RBP12.88□□□□□ -0.35
PRKCB-207ENST00000486868 GTF2A2P52657 109 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 FIGNQ5HY92 759 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 KCNV1Q6PIU1 500 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 LRRC55Q6ZSA7 311 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 PPFIBP1Q86W92 1011 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 CNGA4Q8IV77 575 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 TMEM174Q8WUU8 243 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 SCFD1Q8WVM8 642 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 CNOT6LQ96LI5 555 aaKnown RBP12.88□□□□□ -0.35
PRKCB-207ENST00000486868 UIMC1Q96RL1 719 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 ERGIC2Q96RQ1 377 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 TUBGCP2Q9BSJ2 902 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 PARVGQ9HBI0 331 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 CLEC11AQ9Y240 323 aa12.88□□□□□ -0.35
PRKCB-207ENST00000486868 OTOFQ9HC10 1997 aa12.87□□□□□ -0.35
PRKCB-207ENST00000486868 GOLGB1Q14789 3259 aaKnown RBP12.87□□□□□ -0.35
PRKCB-207ENST00000486868 AKR1B15C9JRZ8 316 aaPredicted RBP12.87□□□□□ -0.35
PRKCB-207ENST00000486868 ARHGAP6O43182 974 aa12.87□□□□□ -0.35
PRKCB-207ENST00000486868 ATP9AO75110 1047 aa12.87□□□□□ -0.35
PRKCB-207ENST00000486868 RGS20O76081 388 aa12.87□□□□□ -0.35
PRKCB-207ENST00000486868 FAM13AO94988 1023 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms