RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 PDE4AP27815 886 aa23.02■■□□□ 1.28
PHF1-208ENST00000486845 SMAD2Q15796 467 aaKnown RBP23.02■■□□□ 1.28
PHF1-208ENST00000486845 DNAJB3Q8WWF6 145 aa23.02■■□□□ 1.28
PHF1-208ENST00000486845 ZNF689Q96CS4 500 aaPredicted RBP23.02■■□□□ 1.28
PHF1-208ENST00000486845 MYL10Q9BUA6 226 aa23.02■■□□□ 1.28
PHF1-208ENST00000486845 SMARCAD1Q9H4L7 1026 aa23.02■■□□□ 1.28
PHF1-208ENST00000486845 PSTPIP2Q9H939 334 aa23.02■■□□□ 1.28
PHF1-208ENST00000486845 CDY2AQ9Y6F7 541 aa23.02■■□□□ 1.28
PHF1-208ENST00000486845 ITGB5P18084 799 aa23.01■■□□□ 1.27
PHF1-208ENST00000486845 MRPS6P82932 125 aaKnown RBP23.01■■□□□ 1.27
PHF1-208ENST00000486845 MTMR1Q13613 665 aa23.01■■□□□ 1.27
PHF1-208ENST00000486845 CASC1Q6TDU7 716 aa23.01■■□□□ 1.27
PHF1-208ENST00000486845 MTA3Q9BTC8 594 aa23.01■■□□□ 1.27
PHF1-208ENST00000486845 KCNH6Q9H252 994 aa23.01■■□□□ 1.27
PHF1-208ENST00000486845 RRN3P2A6NIE6 340 aa23■■□□□ 1.27
PHF1-208ENST00000486845 SGSM2O43147 1006 aa23■■□□□ 1.27
PHF1-208ENST00000486845 MBTPS2O43462 519 aa23■■□□□ 1.27
PHF1-208ENST00000486845 DGKIO75912 1065 aa23■■□□□ 1.27
PHF1-208ENST00000486845 IRS1P35568 1242 aa23■■□□□ 1.27
PHF1-208ENST00000486845 SMAD4Q13485 552 aaKnown RBP23■■□□□ 1.27
PHF1-208ENST00000486845 CLUL1Q15846 466 aa23■■□□□ 1.27
PHF1-208ENST00000486845 MARCH8Q5T0T0 291 aa23■■□□□ 1.27
PHF1-208ENST00000486845 ALYREFQ86V81 257 aaKnown RBP23■■□□□ 1.27
PHF1-208ENST00000486845 UBIAD1Q9Y5Z9 338 aa23■■□□□ 1.27
PHF1-208ENST00000486845 MAFGO15525 162 aa22.99■■□□□ 1.27
PHF1-208ENST00000486845 PLEKHA8P1O95397 391 aa22.99■■□□□ 1.27
PHF1-208ENST00000486845 DLX2Q07687 328 aaPredicted RBP22.99■■□□□ 1.27
PHF1-208ENST00000486845 IER5Q5VY09 327 aa22.99■■□□□ 1.27
PHF1-208ENST00000486845 NFXL1Q6ZNB6 911 aa22.99■■□□□ 1.27
PHF1-208ENST00000486845 CMTR2Q8IYT2 770 aaKnown RBP22.99■■□□□ 1.27
PHF1-208ENST00000486845 SRBD1Q8N5C6 995 aaKnown RBP22.99■■□□□ 1.27
PHF1-208ENST00000486845 MAP4K1Q92918 833 aa22.99■■□□□ 1.27
PHF1-208ENST00000486845 P2RX5Q93086 422 aa22.99■■□□□ 1.27
PHF1-208ENST00000486845 PPP2R3CQ969Q6 453 aa22.99■■□□□ 1.27
PHF1-208ENST00000486845 FTHL17Q9BXU8 183 aa22.99■■□□□ 1.27
PHF1-208ENST00000486845 PKD2L1Q9P0L9 805 aa22.99■■□□□ 1.27
PHF1-208ENST00000486845 SQORQ9Y6N5 450 aa22.99■■□□□ 1.27
PHF1-208ENST00000486845 SPDYE3A6NKU9 549 aa22.98■■□□□ 1.27
PHF1-208ENST00000486845 PRC1O43663 620 aa22.98■■□□□ 1.27
PHF1-208ENST00000486845 TBX10O75333 385 aa22.98■■□□□ 1.27
PHF1-208ENST00000486845 CD52P31358 61 aa22.98■■□□□ 1.27
PHF1-208ENST00000486845 IGBP1P78318 339 aa22.98■■□□□ 1.27
PHF1-208ENST00000486845 NAALADL2Q58DX5 795 aa22.98■■□□□ 1.27
PHF1-208ENST00000486845 NPAS4Q8IUM7 802 aa22.98■■□□□ 1.27
PHF1-208ENST00000486845 TMTC2Q8N394 836 aa22.98■■□□□ 1.27
PHF1-208ENST00000486845 LINC01599Q8WXQ3 324 aa22.98■■□□□ 1.27
PHF1-208ENST00000486845 TNPO1Q92973 898 aaKnown RBP22.98■■□□□ 1.27
PHF1-208ENST00000486845 FAM49AQ9H0Q0 323 aaPredicted RBP22.98■■□□□ 1.27
PHF1-208ENST00000486845 IGFLR1Q9H665 355 aa22.98■■□□□ 1.27
PHF1-208ENST00000486845 AGO3Q9H9G7 860 aaKnown RBP22.98■■□□□ 1.27
PHF1-208ENST00000486845 ALG13Q9NP73 1137 aaKnown RBP22.98■■□□□ 1.27
PHF1-208ENST00000486845 JADE2Q9NQC1 790 aa22.98■■□□□ 1.27
PHF1-208ENST00000486845 CD207Q9UJ71 328 aa22.98■■□□□ 1.27
PHF1-208ENST00000486845 PLAGL2Q9UPG8 496 aa22.98■■□□□ 1.27
PHF1-208ENST00000486845 MRPL42Q9Y6G3 142 aaKnown RBP22.98■■□□□ 1.27
PHF1-208ENST00000486845 CCDC69A6NI79 296 aa22.97■■□□□ 1.27
PHF1-208ENST00000486845 M0QZ92 97 aa22.97■■□□□ 1.27
PHF1-208ENST00000486845 CSPG5O95196 566 aa22.97■■□□□ 1.27
PHF1-208ENST00000486845 CALM1P0DP23 149 aa22.97■■□□□ 1.27
PHF1-208ENST00000486845 CALM2P0DP24 149 aa22.97■■□□□ 1.27
PHF1-208ENST00000486845 CALM3P0DP25 149 aa22.97■■□□□ 1.27
PHF1-208ENST00000486845 AZI2Q9H6S1 392 aa22.97■■□□□ 1.27
PHF1-208ENST00000486845 JPH1Q9HDC5 661 aaPredicted RBP22.97■■□□□ 1.27
PHF1-208ENST00000486845 TRPV2Q9Y5S1 764 aa22.97■■□□□ 1.27
PHF1-208ENST00000486845 RBM8AQ9Y5S9 174 aaKnown RBP22.97■■□□□ 1.27
PHF1-208ENST00000486845 STAG3L1P0CL83 205 aa22.96■■□□□ 1.27
PHF1-208ENST00000486845 INSRRP14616 1297 aa22.96■■□□□ 1.27
PHF1-208ENST00000486845 MCM5P33992 734 aa22.96■■□□□ 1.27
PHF1-208ENST00000486845 ADAM15Q13444 863 aa22.96■■□□□ 1.27
PHF1-208ENST00000486845 UBE2SQ16763 222 aa22.96■■□□□ 1.27
PHF1-208ENST00000486845 HERC4Q5GLZ8 1057 aaPredicted RBP22.96■■□□□ 1.27
PHF1-208ENST00000486845 TMEM87BQ96K49 555 aa22.96■■□□□ 1.27
PHF1-208ENST00000486845 STXBP3O00186 592 aa22.95■■□□□ 1.26
PHF1-208ENST00000486845 SH2B2O14492 632 aaPredicted RBP22.95■■□□□ 1.26
PHF1-208ENST00000486845 LINC01565O15544 149 aa22.95■■□□□ 1.26
PHF1-208ENST00000486845 GTF2F1P35269 517 aaKnown RBP eCLIP22.95■■□□□ 1.261e-7■□□□□ 11.3
PHF1-208ENST00000486845 NDUFV1P49821 464 aa22.95■■□□□ 1.26
PHF1-208ENST00000486845 CAMK1Q14012 370 aa22.95■■□□□ 1.26
PHF1-208ENST00000486845 CMTR1Q8N1G2 835 aaKnown RBP22.95■■□□□ 1.26
PHF1-208ENST00000486845 CRIPAKQ8N1N5 446 aa22.95■■□□□ 1.26
PHF1-208ENST00000486845 MFSD14AQ96MC6 490 aa22.95■■□□□ 1.26
PHF1-208ENST00000486845 PCYT2Q99447 389 aa22.95■■□□□ 1.26
PHF1-208ENST00000486845 KIAA1671Q9BY89 1806 aa22.95■■□□□ 1.26
PHF1-208ENST00000486845 SLC9A2Q9UBY0 812 aa22.95■■□□□ 1.26
PHF1-208ENST00000486845 PCDHA6Q9UN73 950 aa22.95■■□□□ 1.26
PHF1-208ENST00000486845 TRPC6Q9Y210 931 aa22.95■■□□□ 1.26
PHF1-208ENST00000486845 PCDHA8Q9Y5H6 950 aa22.95■■□□□ 1.26
PHF1-208ENST00000486845 IGSF9BQ9UPX0 1349 aa22.94■■□□□ 1.26
PHF1-208ENST00000486845 ITGB1P05556 798 aa22.94■■□□□ 1.26
PHF1-208ENST00000486845 NHLH1Q02575 133 aa22.94■■□□□ 1.26
PHF1-208ENST00000486845 PAK2Q13177 524 aa22.94■■□□□ 1.26
PHF1-208ENST00000486845 HFE2Q6ZVN8 426 aa22.94■■□□□ 1.26
PHF1-208ENST00000486845 RTN4RL1Q86UN2 441 aaPredicted RBP22.94■■□□□ 1.26
PHF1-208ENST00000486845 RNF135Q8IUD6 432 aa22.94■■□□□ 1.26
PHF1-208ENST00000486845 ZBTB10Q96DT7 871 aa22.94■■□□□ 1.26
PHF1-208ENST00000486845 FBXL18Q96ME1 805 aa22.94■■□□□ 1.26
PHF1-208ENST00000486845 MUTYHQ9UIF7 546 aa22.94■■□□□ 1.26
PHF1-208ENST00000486845 PADI3Q9ULW8 664 aa22.94■■□□□ 1.26
PHF1-208ENST00000486845 PCDHA2Q9Y5H9 948 aa22.94■■□□□ 1.26
PHF1-208ENST00000486845 ZNF318Q5VUA4 2279 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms