RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 EPM2AIP1Q7L775 607 aaPredicted RBP19.82■□□□□ 0.76
PDLIM7-207ENST00000486828 KCTD17Q8N5Z5 321 aa19.82■□□□□ 0.76
PDLIM7-207ENST00000486828 SNX12Q9UMY4 172 aa19.82■□□□□ 0.76
PDLIM7-207ENST00000486828 SERPING1P05155 500 aa19.82■□□□□ 0.76
PDLIM7-207ENST00000486828 PRLRP16471 622 aa19.82■□□□□ 0.76
PDLIM7-207ENST00000486828 MCM3P25205 808 aa19.82■□□□□ 0.76
PDLIM7-207ENST00000486828 ZNF76P36508 570 aa19.82■□□□□ 0.76
PDLIM7-207ENST00000486828 SFR1Q86XK3 245 aa19.82■□□□□ 0.76
PDLIM7-207ENST00000486828 CAGE1Q8TC20 777 aa19.82■□□□□ 0.76
PDLIM7-207ENST00000486828 ALS2CR12Q96Q35 445 aa19.82■□□□□ 0.76
PDLIM7-207ENST00000486828 FHDC1Q9C0D6 1143 aaPredicted RBP19.82■□□□□ 0.76
PDLIM7-207ENST00000486828 TARSL2A2RTX5 802 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-207ENST00000486828 ZNF185O15231 689 aa19.81■□□□□ 0.76
PDLIM7-207ENST00000486828 MOCS3O95396 460 aa19.81■□□□□ 0.76
PDLIM7-207ENST00000486828 NR2F2P24468 414 aa19.81■□□□□ 0.76
PDLIM7-207ENST00000486828 ECE1P42892 770 aa19.81■□□□□ 0.76
PDLIM7-207ENST00000486828 POLR2FP61218 127 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-207ENST00000486828 GFPT1Q06210 699 aaPredicted RBP19.81■□□□□ 0.76
PDLIM7-207ENST00000486828 KNOP1Q1ED39 458 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-207ENST00000486828 TDRD12Q587J7 1177 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-207ENST00000486828 CYP2W1Q8TAV3 490 aa19.81■□□□□ 0.76
PDLIM7-207ENST00000486828 TMX2Q9Y320 296 aa19.81■□□□□ 0.76
PDLIM7-207ENST00000486828 PSME4Q14997 1843 aa19.81■□□□□ 0.76
PDLIM7-207ENST00000486828 IGLV3-22A0A075B6J6 115 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 SPDYE2BA6NHP3 402 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 TCP10L2B9ZVM9 353 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 PDE2AO00408 941 aaPredicted RBP19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 TLR2O60603 784 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 SPDYE6P0CI01 402 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 IQCEQ6IPM2 695 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 GPIHBP1Q8IV16 184 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 TTLL6Q8N841 843 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 EIF2AK1Q9BQI3 630 aaKnown RBP19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 GOPCQ9HD26 462 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 UTRNP46939 3433 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 EIF3JO75822 258 aaKnown RBP19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 EYA4O95677 639 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 EPS15P42566 896 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 CYP4A11Q02928 519 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 KCNH2Q12809 1159 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 GPS2Q13227 327 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 KIAA1755Q5JYT7 1200 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 FRMD5Q7Z6J6 570 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 CRACR2AQ9BSW2 395 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 BHMT2Q9H2M3 363 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 SUGCTQ9HAC7 445 aa19.8■□□□□ 0.76
PDLIM7-207ENST00000486828 H3BQF6 201 aa19.79■□□□□ 0.76
PDLIM7-207ENST00000486828 EML1O00423 815 aa19.79■□□□□ 0.76
PDLIM7-207ENST00000486828 PDXKO00764 312 aa19.79■□□□□ 0.76
PDLIM7-207ENST00000486828 HOXD13P35453 343 aa19.79■□□□□ 0.76
PDLIM7-207ENST00000486828 CASP8Q14790 479 aa19.79■□□□□ 0.76
PDLIM7-207ENST00000486828 BMT2Q1RMZ1 405 aa19.79■□□□□ 0.76
PDLIM7-207ENST00000486828 RSBN1LQ6PCB5 846 aaPredicted RBP19.79■□□□□ 0.76
PDLIM7-207ENST00000486828 ZNF572Q7Z3I7 529 aaPredicted RBP19.79■□□□□ 0.76
PDLIM7-207ENST00000486828 ACER1Q8TDN7 264 aa19.79■□□□□ 0.76
PDLIM7-207ENST00000486828 FAM151AQ8WW52 585 aa19.79■□□□□ 0.76
PDLIM7-207ENST00000486828 GANQ9H2C0 597 aa19.79■□□□□ 0.76
PDLIM7-207ENST00000486828 HDAC9Q9UKV0 1011 aa19.79■□□□□ 0.76
PDLIM7-207ENST00000486828 RABGAP1Q9Y3P9 1069 aa19.79■□□□□ 0.76
PDLIM7-207ENST00000486828 CALUO43852 315 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 MYBP10242 640 aa19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 CREG2Q8IUH2 290 aa19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 RNF10Q8N5U6 811 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 NLGN2Q8NFZ4 835 aa19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 SYT17Q9BSW7 474 aa19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 RUSC1Q9BVN2 902 aa19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 ZCCHC17Q9NP64 241 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 AIPL1Q9NZN9 384 aa19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 PIM2Q9P1W9 311 aa19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 ZNF70Q9UC06 446 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 CLRN2A0PK11 232 aa19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 C21orf2O43822 256 aa19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 TCP1P17987 556 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 CYP2C19P33261 490 aa19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 RASSF7Q02833 373 aa19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 ITIH3Q06033 890 aa19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 WDR18Q9BV38 432 aa19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 PDE11AQ9HCR9 933 aa19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 TUFT1Q9NNX1 390 aa19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 LUC7LQ9NQ29 371 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 TYW1Q9NV66 732 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 RNF216Q9NWF9 866 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 ARMCX3Q9UH62 379 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 SALL4Q9UJQ4 1053 aa19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 ZBTB21Q9ULJ3 1066 aa19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 HYOU1Q9Y4L1 999 aa19.78■□□□□ 0.76
PDLIM7-207ENST00000486828 RSPH10B2B2RC85 870 aa19.77■□□□□ 0.76
PDLIM7-207ENST00000486828 TBCAO75347 108 aaKnown RBP19.77■□□□□ 0.76
PDLIM7-207ENST00000486828 PRPF6O94906 941 aaKnown RBP19.77■□□□□ 0.76
PDLIM7-207ENST00000486828 CFBP00751 764 aa19.77■□□□□ 0.76
PDLIM7-207ENST00000486828 RSPH10BP0C881 870 aa19.77■□□□□ 0.76
PDLIM7-207ENST00000486828 APBA1Q02410 837 aa19.77■□□□□ 0.76
PDLIM7-207ENST00000486828 MAP9Q49MG5 647 aa19.77■□□□□ 0.76
PDLIM7-207ENST00000486828 DRC1Q96MC2 740 aa19.77■□□□□ 0.76
PDLIM7-207ENST00000486828 NOX5Q96PH1 765 aa19.77■□□□□ 0.76
PDLIM7-207ENST00000486828 HSD17B14Q9BPX1 270 aa19.77■□□□□ 0.76
PDLIM7-207ENST00000486828 RANBP17Q9H2T7 1088 aaKnown RBP19.77■□□□□ 0.76
PDLIM7-207ENST00000486828 RGL1Q9NZL6 768 aa19.77■□□□□ 0.76
PDLIM7-207ENST00000486828 GCOM1H8Y6P7 765 aaPredicted RBP19.76■□□□□ 0.75
PDLIM7-207ENST00000486828 PSMD10O75832 226 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms