RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 CASC1Q6TDU7 716 aa7.16□□□□□ -1.26
USP41-204ENST00000486536 TICAM2Q86XR7 235 aa7.16□□□□□ -1.26
USP41-204ENST00000486536 SMYD4Q8IYR2 804 aaPredicted RBP7.16□□□□□ -1.26
USP41-204ENST00000486536 MFSD2AQ8NA29 543 aa7.16□□□□□ -1.26
USP41-204ENST00000486536 PI4K2BQ8TCG2 481 aa7.16□□□□□ -1.26
USP41-204ENST00000486536 VWCEQ96DN2 955 aa7.16□□□□□ -1.26
USP41-204ENST00000486536 RCC1LQ96I51 464 aaKnown RBP7.16□□□□□ -1.26
USP41-204ENST00000486536 MPHOSPH8Q99549 860 aa7.16□□□□□ -1.26
USP41-204ENST00000486536 PUS3Q9BZE2 481 aaKnown RBP7.16□□□□□ -1.26
USP41-204ENST00000486536 CNNM1Q9NRU3 951 aa7.16□□□□□ -1.26
USP41-204ENST00000486536 PCOLCE2Q9UKZ9 415 aa7.16□□□□□ -1.26
USP41-204ENST00000486536 EMC9Q9Y3B6 208 aa7.16□□□□□ -1.26
USP41-204ENST00000486536 MYH14Q7Z406 1995 aaKnown RBP7.16□□□□□ -1.26
USP41-204ENST00000486536 PNPLA7Q6ZV29 1317 aa7.16□□□□□ -1.26
USP41-204ENST00000486536 ANKRD36CQ5JPF3 1778 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 POLRMTO00411 1230 aaKnown RBP7.15□□□□□ -1.26
USP41-204ENST00000486536 DNAJC8O75937 253 aaPredicted RBP7.15□□□□□ -1.26
USP41-204ENST00000486536 LRIG2O94898 1065 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 ATP5JP18859 108 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 METTL24Q5JXM2 366 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 WWC2Q6AWC2 1192 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 PRR5LQ6MZQ0 368 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 ARMCX6Q7L4S7 300 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 STRA8Q7Z7C7 330 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 ANKRD18AQ8IVF6 992 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 FMR1NBQ8N0W7 255 aaPredicted RBP7.15□□□□□ -1.26
USP41-204ENST00000486536 CNTROBQ8N137 903 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 AHI1Q8N157 1196 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 ARHGEF39Q8N4T4 335 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 AFAP1L2Q8N4X5 818 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 VGLL2Q8N8G2 317 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 SLC7A14Q8TBB6 771 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 SLC16A10Q8TF71 515 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.15□□□□□ -1.26
USP41-204ENST00000486536 LEO1Q8WVC0 666 aaPredicted RBP7.15□□□□□ -1.26
USP41-204ENST00000486536 SYT17Q9BSW7 474 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 PDGFDQ9GZP0 370 aaPredicted RBP7.15□□□□□ -1.26
USP41-204ENST00000486536 CCDC8Q9H0W5 538 aaPredicted RBP7.15□□□□□ -1.26
USP41-204ENST00000486536 UPF2Q9HAU5 1272 aaKnown RBP7.15□□□□□ -1.26
USP41-204ENST00000486536 GP6Q9HCN6 339 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 FAM105AQ9NUU6 356 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 BSDC1Q9NW68 430 aaPredicted RBP7.15□□□□□ -1.26
USP41-204ENST00000486536 DBNLQ9UJU6 430 aaKnown RBP7.15□□□□□ -1.26
USP41-204ENST00000486536 ABCC12Q96J65 1359 aa7.15□□□□□ -1.26
USP41-204ENST00000486536 TAF1LQ8IZX4 1826 aa7.15□□□□□ -1.27
USP41-204ENST00000486536 CHD4Q14839 1912 aa7.15□□□□□ -1.27
USP41-204ENST00000486536 A0A1B0GUL7 405 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 KLRG2A4D1S0 409 aaPredicted RBP7.14□□□□□ -1.27
USP41-204ENST00000486536 TERTO14746 1132 aaKnown RBP7.14□□□□□ -1.27
USP41-204ENST00000486536 ZNF609O15014 1411 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 SHOXO15266 292 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 DLX3O60479 287 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 PDE8BO95263 885 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 TIAF1O95411 115 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 SLURP2P0DP57 97 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 ITGA4P13612 1032 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 AFDNP55196 1824 aaKnown RBP7.14□□□□□ -1.27
USP41-204ENST00000486536 RNF4P78317 190 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 DDR1Q08345 913 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 CRY2Q49AN0 593 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 TRIM61Q5EBN2 209 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 CCDC158Q5M9N0 1113 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 POMZP3Q6PJE2 187 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 TRIM59Q8IWR1 403 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 C2CD4AQ8NCU7 369 aaPredicted RBP7.14□□□□□ -1.27
USP41-204ENST00000486536 ADCY4Q8NFM4 1077 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 DNAJB8Q8NHS0 232 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 LPIN2Q92539 896 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 EVI5LQ96CN4 794 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 KREMEN1Q96MU8 473 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 BRIP1Q9BX63 1249 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 MTFR1LQ9H019 292 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 TRIM39Q9HCM9 518 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 NDOR1Q9UHB4 597 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 SFMBT1Q9UHJ3 866 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 TCEAL9Q9UHQ7 104 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 FBXL21Q9UKT6 434 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 ACTL7BQ9Y614 415 aa7.14□□□□□ -1.27
USP41-204ENST00000486536 COL24A1Q17RW2 1714 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 HIP1O00291 1037 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 EPB41L2O43491 1005 aaKnown RBP7.13□□□□□ -1.27
USP41-204ENST00000486536 EYA4O95677 639 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 CELA2BP08218 269 aaPredicted RBP7.13□□□□□ -1.27
USP41-204ENST00000486536 C6orf222P0C671 652 aaPredicted RBP7.13□□□□□ -1.27
USP41-204ENST00000486536 CPEP16870 476 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 FGFR2P21802 821 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 HOXA10P31260 410 aaPredicted RBP7.13□□□□□ -1.27
USP41-204ENST00000486536 DGKGP49619 791 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 GUCY2FP51841 1108 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 TIMM10P62072 90 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 RPS8P62241 208 aaKnown RBP7.13□□□□□ -1.27
USP41-204ENST00000486536 GABREP78334 506 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 GRAPQ13588 217 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 PUM3Q15397 648 aaKnown RBP7.13□□□□□ -1.27
USP41-204ENST00000486536 ATP2B3Q16720 1220 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 NOL9Q5SY16 702 aaKnown RBP7.13□□□□□ -1.27
USP41-204ENST00000486536 TSHZ3Q63HK5 1081 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 FDX2Q6P4F2 183 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 IGF2-ASQ6U949 168 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 LYPD4Q6UWN0 246 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms