RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 FANCLQ9NW38 375 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 DDX20Q9UHI6 824 aaKnown RBP16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 OGDHLQ9ULD0 1010 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 NFE2L3Q9Y4A8 694 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 PFASO15067 1338 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 FRMPD4Q14CM0 1322 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 SYNRGQ9UMZ2 1314 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 POTEB2H3BUK9 544 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 MEIS1O00470 390 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 CBFA2T2O43439 604 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 CD44P16070 742 aaKnown RBP16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 PPP1R2P41236 205 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 ASIC1P78348 528 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 STIM1Q13586 685 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 MCM6Q14566 821 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 SPATA1Q5VX52 437 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 NCAPH2Q6IBW4 605 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 CNNM4Q6P4Q7 775 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 NSMFQ6X4W1 530 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 RNF207Q6ZRF8 634 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 NIPA1Q7RTP0 329 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 UBE2Q1Q7Z7E8 422 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 ZNF467Q7Z7K2 595 aaPredicted RBP16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 ANKLE1Q8NAG6 615 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 CYP2W1Q8TAV3 490 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 SYTL5Q8TDW5 730 aaPredicted RBP16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 NRBP1Q9UHY1 535 aa16.28■□□□□ 0.2
POLR2J3-204ENST00000486319 PVALEFA0A1B0GWK0 134 aa16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 SEPT4O43236 478 aa16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 MSNP26038 577 aaKnown RBP16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 RPA1P27694 616 aa16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 RPS6P62753 249 aaKnown RBP16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 FANCCQ00597 558 aa16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 CNTN2Q02246 1040 aa16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 PCNX4Q63HM2 1172 aa16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 MAMDC4Q6UXC1 1216 aa16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 SPC24Q8NBT2 197 aa16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 GIMAP8Q8ND71 665 aaPredicted RBP16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 SLC5A5Q92911 643 aa16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 MXRA8Q9BRK3 442 aa16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 WDR11Q9BZH6 1224 aa16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 EXOC1Q9NV70 894 aa16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 CYP39A1Q9NYL5 469 aa16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 COL20A1Q9P218 1284 aa16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 RWDD2AQ9UIY3 292 aa16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 VAV3Q9UKW4 847 aa16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 ZKSCAN5Q9Y2L8 839 aa16.27■□□□□ 0.2
POLR2J3-204ENST00000486319 TNRC18O15417 2968 aaPredicted RBP16.27■□□□□ 0.19
POLR2J3-204ENST00000486319 SYNGAP1Q96PV0 1343 aa16.27■□□□□ 0.19
POLR2J3-204ENST00000486319 SERPINC1P01008 464 aa16.26■□□□□ 0.19
POLR2J3-204ENST00000486319 PDE4DQ08499 809 aa16.26■□□□□ 0.19
POLR2J3-204ENST00000486319 DHX8Q14562 1220 aaKnown RBP16.26■□□□□ 0.19
POLR2J3-204ENST00000486319 LRCH2Q5VUJ6 765 aa16.26■□□□□ 0.19
POLR2J3-204ENST00000486319 KLHL10Q6JEL2 608 aa16.26■□□□□ 0.19
POLR2J3-204ENST00000486319 SMYD4Q8IYR2 804 aaPredicted RBP16.26■□□□□ 0.19
POLR2J3-204ENST00000486319 FAM133AQ8N9E0 248 aa16.26■□□□□ 0.19
POLR2J3-204ENST00000486319 PAWRQ96IZ0 340 aaKnown RBP16.26■□□□□ 0.19
POLR2J3-204ENST00000486319 BMP2KQ9NSY1 1161 aaPredicted RBP16.26■□□□□ 0.19
POLR2J3-204ENST00000486319 IFNKQ9P0W0 207 aa16.26■□□□□ 0.19
POLR2J3-204ENST00000486319 KIAA1024Q9UPX6 916 aa16.26■□□□□ 0.19
POLR2J3-204ENST00000486319 MYMKA6NI61 221 aa16.25■□□□□ 0.19
POLR2J3-204ENST00000486319 MED24O75448 989 aa16.25■□□□□ 0.19
POLR2J3-204ENST00000486319 PSMD10O75832 226 aa16.25■□□□□ 0.19
POLR2J3-204ENST00000486319 ZNF18P17022 549 aa16.25■□□□□ 0.19
POLR2J3-204ENST00000486319 CDK11BP21127 795 aaKnown RBP16.25■□□□□ 0.19
POLR2J3-204ENST00000486319 PAK1Q13153 545 aa16.25■□□□□ 0.19
POLR2J3-204ENST00000486319 PPP2R5CQ13362 524 aa16.25■□□□□ 0.19
POLR2J3-204ENST00000486319 ECM1Q16610 540 aa16.25■□□□□ 0.19
POLR2J3-204ENST00000486319 XRRA1Q6P2D8 792 aa16.25■□□□□ 0.19
POLR2J3-204ENST00000486319 UNC13DQ70J99 1090 aa16.25■□□□□ 0.19
POLR2J3-204ENST00000486319 NECAB2Q7Z6G3 386 aa16.25■□□□□ 0.19
POLR2J3-204ENST00000486319 DIS3LQ8TF46 1054 aaKnown RBP16.25■□□□□ 0.19
POLR2J3-204ENST00000486319 UIMC1Q96RL1 719 aa16.25■□□□□ 0.19
POLR2J3-204ENST00000486319 ZNF577Q9BSK1 485 aa16.25■□□□□ 0.19
POLR2J3-204ENST00000486319 POLR3CQ9BUI4 534 aaPredicted RBP16.25■□□□□ 0.19
POLR2J3-204ENST00000486319 XPO4Q9C0E2 1151 aaKnown RBP16.25■□□□□ 0.19
POLR2J3-204ENST00000486319 CTNND2Q9UQB3 1225 aa16.25■□□□□ 0.19
POLR2J3-204ENST00000486319 GDAQ9Y2T3 454 aa16.25■□□□□ 0.19
POLR2J3-204ENST00000486319 POTEB3A0JP26 581 aa16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 PSMA7O14818 248 aa16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 GAS7O60861 476 aa16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 SNAI1O95863 264 aaPredicted RBP16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 ATP1A3P13637 1013 aa16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 MUTP22033 750 aa16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 PRCPP42785 496 aa16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 UBASH3AP57075 661 aa16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 BAATQ14032 418 aaPredicted RBP16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 TPD52L1Q16890 204 aaPredicted RBP16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 COBLL1Q53SF7 1204 aa16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 POTEBQ6S5H4 581 aa16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 SLC30A10Q6XR72 485 aa16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 KCNK18Q7Z418 384 aa16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 CATSPER3Q86XQ3 398 aa16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 ADSSL1Q8N142 457 aa16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 FGD4Q96M96 766 aa16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 TAAR1Q96RJ0 339 aa16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 MED15Q96RN5 788 aa16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 RIT2Q99578 217 aa16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 HTATIP2Q9BUP3 242 aa16.24■□□□□ 0.19
POLR2J3-204ENST00000486319 TEKT3Q9BXF9 490 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms