RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 ACTR2P61160 394 aa16.09■□□□□ 0.17
COL9A1-207ENST00000486080 KCNB1Q14721 858 aa16.09■□□□□ 0.17
COL9A1-207ENST00000486080 PWP2Q15269 919 aaKnown RBP16.09■□□□□ 0.17
COL9A1-207ENST00000486080 MORN1Q5T089 497 aa16.09■□□□□ 0.17
COL9A1-207ENST00000486080 TMEM63BQ5T3F8 832 aa16.09■□□□□ 0.17
COL9A1-207ENST00000486080 SYT2Q8N9I0 419 aaPredicted RBP16.09■□□□□ 0.17
COL9A1-207ENST00000486080 MLKLQ8NB16 471 aa16.09■□□□□ 0.17
COL9A1-207ENST00000486080 NEK9Q8TD19 979 aa16.09■□□□□ 0.17
COL9A1-207ENST00000486080 HPS3Q969F9 1004 aa16.09■□□□□ 0.17
COL9A1-207ENST00000486080 MAML3Q96JK9 1138 aa16.09■□□□□ 0.17
COL9A1-207ENST00000486080 NACC1Q96RE7 527 aa16.09■□□□□ 0.17
COL9A1-207ENST00000486080 LRRC27Q9C0I9 530 aa16.09■□□□□ 0.17
COL9A1-207ENST00000486080 DDX41Q9UJV9 622 aaKnown RBP16.09■□□□□ 0.17
COL9A1-207ENST00000486080 GDAQ9Y2T3 454 aa16.09■□□□□ 0.17
COL9A1-207ENST00000486080 PCDHA10Q9Y5I2 948 aa16.09■□□□□ 0.17
COL9A1-207ENST00000486080 LOXHD1Q8IVV2 1947 aa16.09■□□□□ 0.17
COL9A1-207ENST00000486080 MYH9P35579 1960 aaKnown RBP16.09■□□□□ 0.17
COL9A1-207ENST00000486080 PPP1R3GB7ZBB8 358 aa16.08■□□□□ 0.17
COL9A1-207ENST00000486080 RHOBTB3O94955 611 aa16.08■□□□□ 0.17
COL9A1-207ENST00000486080 CACNB1Q02641 598 aaPredicted RBP16.08■□□□□ 0.17
COL9A1-207ENST00000486080 ZNF658Q5TYW1 1059 aaPredicted RBP16.08■□□□□ 0.17
COL9A1-207ENST00000486080 CNNM4Q6P4Q7 775 aa16.08■□□□□ 0.17
COL9A1-207ENST00000486080 ZNF467Q7Z7K2 595 aaPredicted RBP16.08■□□□□ 0.17
COL9A1-207ENST00000486080 BPIFA3Q9BQP9 254 aa16.08■□□□□ 0.17
COL9A1-207ENST00000486080 RUSC1Q9BVN2 902 aa16.08■□□□□ 0.17
COL9A1-207ENST00000486080 ZSWIM4Q9H7M6 989 aa16.08■□□□□ 0.17
COL9A1-207ENST00000486080 GGPS1O95749 300 aa16.08■□□□□ 0.16
COL9A1-207ENST00000486080 TGFB3P10600 412 aa16.08■□□□□ 0.16
COL9A1-207ENST00000486080 IDEP14735 1019 aa16.08■□□□□ 0.16
COL9A1-207ENST00000486080 CTGFP29279 349 aa16.08■□□□□ 0.16
COL9A1-207ENST00000486080 HTRA3P83110 453 aa16.08■□□□□ 0.16
COL9A1-207ENST00000486080 UVSSAQ2YD98 709 aa16.08■□□□□ 0.16
COL9A1-207ENST00000486080 ABHD15Q6UXT9 468 aa16.08■□□□□ 0.16
COL9A1-207ENST00000486080 UNC13DQ70J99 1090 aa16.08■□□□□ 0.16
COL9A1-207ENST00000486080 SMAP1Q8IYB5 467 aaPredicted RBP16.08■□□□□ 0.16
COL9A1-207ENST00000486080 KCTD17Q8N5Z5 321 aa16.08■□□□□ 0.16
COL9A1-207ENST00000486080 RDM1Q8NG50 284 aa16.08■□□□□ 0.16
COL9A1-207ENST00000486080 EXOC1Q9NV70 894 aa16.08■□□□□ 0.16
COL9A1-207ENST00000486080 MAPK8IP1Q9UQF2 711 aa16.08■□□□□ 0.16
COL9A1-207ENST00000486080 TMEM150BA6NC51 233 aa16.07■□□□□ 0.16
COL9A1-207ENST00000486080 FARP2O94887 1054 aaPredicted RBP16.07■□□□□ 0.16
COL9A1-207ENST00000486080 SNAI1O95863 264 aaPredicted RBP16.07■□□□□ 0.16
COL9A1-207ENST00000486080 PTGS1P23219 599 aa16.07■□□□□ 0.16
COL9A1-207ENST00000486080 C1QTNF8P60827 252 aa16.07■□□□□ 0.16
COL9A1-207ENST00000486080 PSMC5P62195 406 aa16.07■□□□□ 0.16
COL9A1-207ENST00000486080 MAP2K5Q13163 448 aa16.07■□□□□ 0.16
COL9A1-207ENST00000486080 NEDD9Q14511 834 aa16.07■□□□□ 0.16
COL9A1-207ENST00000486080 SWSAP1Q6NVH7 229 aa16.07■□□□□ 0.16
COL9A1-207ENST00000486080 CCDC62Q6P9F0 684 aa16.07■□□□□ 0.16
COL9A1-207ENST00000486080 MAMDC4Q6UXC1 1216 aa16.07■□□□□ 0.16
COL9A1-207ENST00000486080 TRMT1LQ7Z2T5 733 aaKnown RBP16.07■□□□□ 0.16
COL9A1-207ENST00000486080 MED15Q96RN5 788 aa16.07■□□□□ 0.16
COL9A1-207ENST00000486080 BMP2KQ9NSY1 1161 aaPredicted RBP16.07■□□□□ 0.16
COL9A1-207ENST00000486080 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.07■□□□□ 0.16
COL9A1-207ENST00000486080 GABBR1Q9UBS5 961 aa16.07■□□□□ 0.16
COL9A1-207ENST00000486080 DIS3Q9Y2L1 958 aaKnown RBP16.07■□□□□ 0.16
COL9A1-207ENST00000486080 SYNGAP1Q96PV0 1343 aa16.07■□□□□ 0.16
COL9A1-207ENST00000486080 PVALEFA0A1B0GWK0 134 aa16.06■□□□□ 0.16
COL9A1-207ENST00000486080 BECN2A8MW95 431 aa16.06■□□□□ 0.16
COL9A1-207ENST00000486080 LYPLA2O95372 231 aa16.06■□□□□ 0.16
COL9A1-207ENST00000486080 ALDH1A1P00352 501 aa16.06■□□□□ 0.16
COL9A1-207ENST00000486080 KRT18P05783 430 aaKnown RBP16.06■□□□□ 0.16
COL9A1-207ENST00000486080 PSAPP07602 524 aa16.06■□□□□ 0.16
COL9A1-207ENST00000486080 STK4Q13043 487 aa16.06■□□□□ 0.16
COL9A1-207ENST00000486080 GIT2Q14161 759 aa16.06■□□□□ 0.16
COL9A1-207ENST00000486080 NCAPHQ15003 741 aa16.06■□□□□ 0.16
COL9A1-207ENST00000486080 KLHL10Q6JEL2 608 aa16.06■□□□□ 0.16
COL9A1-207ENST00000486080 RINT1Q6NUQ1 792 aa16.06■□□□□ 0.16
COL9A1-207ENST00000486080 TAPT1Q6NXT6 567 aa16.06■□□□□ 0.16
COL9A1-207ENST00000486080 CCDC60Q8IWA6 550 aaPredicted RBP16.06■□□□□ 0.16
COL9A1-207ENST00000486080 GIMAP8Q8ND71 665 aaPredicted RBP16.06■□□□□ 0.16
COL9A1-207ENST00000486080 COPS5Q92905 334 aa16.06■□□□□ 0.16
COL9A1-207ENST00000486080 TINF2Q9BSI4 451 aa16.06■□□□□ 0.16
COL9A1-207ENST00000486080 KATNBL1Q9H079 304 aa16.06■□□□□ 0.16
COL9A1-207ENST00000486080 POLD4Q9HCU8 107 aa16.06■□□□□ 0.16
COL9A1-207ENST00000486080 AP5Z1O43299 807 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 ZNF862O60290 1169 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 SUPT20HL2P0C7V6 817 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 TXNP10599 105 aaKnown RBP16.05■□□□□ 0.16
COL9A1-207ENST00000486080 PRCPP42785 496 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 EHHADHQ08426 723 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 KCNV1Q6PIU1 500 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 C4orf19Q8IY42 314 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 TRMT44Q8IYL2 757 aaKnown RBP16.05■□□□□ 0.16
COL9A1-207ENST00000486080 USP6NLQ92738 828 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 CCDC47Q96A33 483 aaKnown RBP16.05■□□□□ 0.16
COL9A1-207ENST00000486080 SH2D3AQ9BRG2 576 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 REEP2Q9BRK0 252 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 ARHGAP39Q9C0H5 1083 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 PANK4Q9NVE7 773 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 FLRT1Q9NZU1 646 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 DACH1Q9UI36 760 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 GJD2Q9UKL4 321 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 GSTTP1A0A1W2PQM5 241 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 GOLGA6L19H0YKK7 550 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 TNPO2O14787 897 aaKnown RBP16.05■□□□□ 0.16
COL9A1-207ENST00000486080 ATG7O95352 703 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 TBC1D8O95759 1140 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 YWHABP31946 246 aaKnown RBP16.05■□□□□ 0.16
COL9A1-207ENST00000486080 COASYQ13057 564 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms