RNA–Protein interactions for RNA: ENST00000485962.5

SGSM3-213, Transcript of small G protein signaling modulator 3, humanhuman

TSL 5

Gene SGSM3, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-213ENST00000485962 EHHADHQ08426 723 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 ASTE1Q2TB18 679 aaPredicted RBP13.53□□□□□ -0.24
SGSM3-213ENST00000485962 HERC4Q5GLZ8 1057 aaPredicted RBP13.53□□□□□ -0.24
SGSM3-213ENST00000485962 HGSNATQ68CP4 663 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 PPP4R3AQ6IN85 833 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 PRR5LQ6MZQ0 368 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 FAM196AQ6ZSG2 479 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 C15orf52Q6ZUT6 534 aaKnown RBP13.53□□□□□ -0.24
SGSM3-213ENST00000485962 HAS1Q92839 578 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 FGFBP2Q9BYJ0 223 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 TMEM165Q9HC07 324 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 DAGLAQ9Y4D2 1042 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 AFF2P51816 1311 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 NPHP3-ACAD11A0A0J9YXS1 232 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 PPFIA4O75335 1185 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 PALMO75781 387 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 FTCDO95954 541 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 ZNF543Q08ER8 600 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 KCTD1Q719H9 257 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 ZNF572Q7Z3I7 529 aaPredicted RBP13.53□□□□□ -0.24
SGSM3-213ENST00000485962 CCDC65Q8IXS2 484 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 TBC1D5Q92609 795 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 EDEM3Q9BZQ6 932 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 PSTPIP2Q9H939 334 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 PCDHGA4Q9Y5G9 962 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 PPP1R11O60927 126 aaPredicted RBP13.53□□□□□ -0.24
SGSM3-213ENST00000485962 HSF2BPO75031 334 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 PPFIA2O75334 1257 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 RNASE9P60153 205 aaKnown RBP13.53□□□□□ -0.24
SGSM3-213ENST00000485962 MCTP2Q6DN12 878 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 MYLK4Q86YV6 388 aaPredicted RBP13.53□□□□□ -0.24
SGSM3-213ENST00000485962 RNF10Q8N5U6 811 aaKnown RBP13.53□□□□□ -0.24
SGSM3-213ENST00000485962 CXorf38Q8TB03 319 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 RABEP2Q9H5N1 569 aa13.53□□□□□ -0.24
SGSM3-213ENST00000485962 KDM3AQ9Y4C1 1321 aa13.52□□□□□ -0.24
SGSM3-213ENST00000485962 POTEB3A0JP26 581 aa13.52□□□□□ -0.24
SGSM3-213ENST00000485962 POTECB2RU33 542 aa13.52□□□□□ -0.24
SGSM3-213ENST00000485962 RIMBP2O15034 1052 aa13.52□□□□□ -0.24
SGSM3-213ENST00000485962 TBC1D25Q3MII6 688 aa13.52□□□□□ -0.24
SGSM3-213ENST00000485962 POTEBQ6S5H4 581 aa13.52□□□□□ -0.24
SGSM3-213ENST00000485962 GPBP1Q86WP2 473 aa13.52□□□□□ -0.24
SGSM3-213ENST00000485962 IFT81Q8WYA0 676 aa13.52□□□□□ -0.24
SGSM3-213ENST00000485962 FAM163AQ96GL9 167 aaPredicted RBP13.52□□□□□ -0.24
SGSM3-213ENST00000485962 NT5C3AQ9H0P0 336 aa13.52□□□□□ -0.24
SGSM3-213ENST00000485962 TSKSQ9UJT2 592 aa13.52□□□□□ -0.24
SGSM3-213ENST00000485962 PACSIN2Q9UNF0 486 aaPredicted RBP13.52□□□□□ -0.24
SGSM3-213ENST00000485962 CTDP1Q9Y5B0 961 aaPredicted RBP13.52□□□□□ -0.24
SGSM3-213ENST00000485962 GAKO14976 1311 aa13.52□□□□□ -0.25
SGSM3-213ENST00000485962 USP17L10C9JJH3 530 aa13.52□□□□□ -0.25
SGSM3-213ENST00000485962 OPA1O60313 960 aa13.52□□□□□ -0.25
SGSM3-213ENST00000485962 TLR2O60603 784 aa13.52□□□□□ -0.25
SGSM3-213ENST00000485962 NOL4O94818 638 aa13.52□□□□□ -0.25
SGSM3-213ENST00000485962 PLA2G4BP0C869 781 aa13.52□□□□□ -0.25
SGSM3-213ENST00000485962 NOVP48745 357 aa13.52□□□□□ -0.25
SGSM3-213ENST00000485962 ZCWPW2Q504Y3 356 aa13.52□□□□□ -0.25
SGSM3-213ENST00000485962 EMBQ6PCB8 327 aa13.52□□□□□ -0.25
SGSM3-213ENST00000485962 FAM133AQ8N9E0 248 aa13.52□□□□□ -0.25
SGSM3-213ENST00000485962 RUBCNQ92622 972 aa13.52□□□□□ -0.25
SGSM3-213ENST00000485962 CHCHD3Q9NX63 227 aaKnown RBP13.52□□□□□ -0.25
SGSM3-213ENST00000485962 POLLQ9UGP5 575 aa13.52□□□□□ -0.25
SGSM3-213ENST00000485962 KLHL30Q0D2K2 578 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 PPFIA1Q13136 1202 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 SEPT2Q15019 361 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 KIAA0753Q2KHM9 967 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 TSEN2Q8NCE0 465 aaKnown RBP13.51□□□□□ -0.25
SGSM3-213ENST00000485962 RBM17Q96I25 401 aaKnown RBP13.51□□□□□ -0.25
SGSM3-213ENST00000485962 ADAMTS1Q9UHI8 967 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 SERPINB13Q9UIV8 391 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 ATP6V0A2Q9Y487 856 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 MYH4Q9Y623 1939 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 ESYT3A0FGR9 886 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 USP17L15C9J2P7 530 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 USP17L13C9JLJ4 530 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 USP17L11C9JVI0 530 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 USP17L18D6R9N7 530 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 USP17L22D6RA61 530 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 USP17L17D6RBQ6 530 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 USP17L19D6RCP7 530 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 GOLGA8KD6RF30 607 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 USP17L20D6RJB6 530 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 GNA14O95837 355 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 SNHG28P0DPA3 235 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 KLRC1P26715 233 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 ADCY2Q08462 1091 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 USP17L24Q0WX57 530 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 ADAM9Q13443 819 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 PPP1R18Q6NYC8 613 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 USP17L6PQ6QN14 398 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 IFT20Q8IY31 132 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 TBC1D16Q8TBP0 767 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 CEP63Q96MT8 703 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 CAPS2Q9BXY5 557 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 EMILIN3Q9NT22 766 aa13.51□□□□□ -0.25
SGSM3-213ENST00000485962 ZBTB5O15062 677 aa13.5□□□□□ -0.25
SGSM3-213ENST00000485962 HEXIM1O94992 359 aaKnown RBP13.5□□□□□ -0.25
SGSM3-213ENST00000485962 HOXA7P31268 230 aaPredicted RBP13.5□□□□□ -0.25
SGSM3-213ENST00000485962 GUCY2DQ02846 1103 aa13.5□□□□□ -0.25
SGSM3-213ENST00000485962 ASIC2Q16515 512 aa13.5□□□□□ -0.25
SGSM3-213ENST00000485962 QTRT2Q9H974 415 aaKnown RBP13.5□□□□□ -0.25
SGSM3-213ENST00000485962 EPB41L5Q9HCM4 733 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms