RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 H3BQ06 376 aaPredicted RBP23.27■■□□□ 1.32
CHRD-215ENST00000485883 ENPP3O14638 875 aa23.27■■□□□ 1.32
CHRD-215ENST00000485883 FBXO47Q5MNV8 452 aa23.27■■□□□ 1.32
CHRD-215ENST00000485883 FIBCD1Q8N539 461 aa23.27■■□□□ 1.32
CHRD-215ENST00000485883 AGO3Q9H9G7 860 aaKnown RBP23.27■■□□□ 1.32
CHRD-215ENST00000485883 JPH1Q9HDC5 661 aaPredicted RBP23.27■■□□□ 1.32
CHRD-215ENST00000485883 C11orf16Q9NQ32 467 aa23.27■■□□□ 1.32
CHRD-215ENST00000485883 KCNH7Q9NS40 1196 aa23.27■■□□□ 1.32
CHRD-215ENST00000485883 COL4A6Q14031 1691 aa23.26■■□□□ 1.31
CHRD-215ENST00000485883 FAM86C2PA6NEL3 165 aa23.26■■□□□ 1.31
CHRD-215ENST00000485883 INSRRP14616 1297 aa23.26■■□□□ 1.31
CHRD-215ENST00000485883 TIGD5Q53EQ6 642 aa23.26■■□□□ 1.31
CHRD-215ENST00000485883 PTCRAQ6ISU1 281 aaPredicted RBP23.26■■□□□ 1.31
CHRD-215ENST00000485883 APOA5Q6Q788 366 aa23.26■■□□□ 1.31
CHRD-215ENST00000485883 RSPH3Q86UC2 560 aa23.26■■□□□ 1.31
CHRD-215ENST00000485883 FAM178BQ8IXR5 827 aa23.26■■□□□ 1.31
CHRD-215ENST00000485883 NEK9Q8TD19 979 aa23.26■■□□□ 1.31
CHRD-215ENST00000485883 LINC01599Q8WXQ3 324 aa23.26■■□□□ 1.31
CHRD-215ENST00000485883 MXRA8Q9BRK3 442 aa23.26■■□□□ 1.31
CHRD-215ENST00000485883 FAM49AQ9H0Q0 323 aaPredicted RBP23.26■■□□□ 1.31
CHRD-215ENST00000485883 RC3H2Q9HBD1 1191 aaKnown RBP23.26■■□□□ 1.31
CHRD-215ENST00000485883 SLC9A2Q9UBY0 812 aa23.26■■□□□ 1.31
CHRD-215ENST00000485883 BRPF3Q9ULD4 1205 aa23.26■■□□□ 1.31
CHRD-215ENST00000485883 MAFGO15525 162 aa23.25■■□□□ 1.31
CHRD-215ENST00000485883 ARP10275 920 aa23.25■■□□□ 1.31
CHRD-215ENST00000485883 CTNNB1P35222 781 aa23.25■■□□□ 1.31
CHRD-215ENST00000485883 TRAPPC12Q8WVT3 735 aa23.25■■□□□ 1.31
CHRD-215ENST00000485883 GRXCR2A6NFK2 248 aa23.24■■□□□ 1.31
CHRD-215ENST00000485883 NAPAP54920 295 aa23.24■■□□□ 1.31
CHRD-215ENST00000485883 MRPS6P82932 125 aaKnown RBP23.24■■□□□ 1.31
CHRD-215ENST00000485883 TMEM62Q0P6H9 643 aa23.24■■□□□ 1.31
CHRD-215ENST00000485883 FUT2Q10981 343 aa23.24■■□□□ 1.31
CHRD-215ENST00000485883 TMEM31Q5JXX7 168 aa23.24■■□□□ 1.31
CHRD-215ENST00000485883 SYNE3Q6ZMZ3 975 aa23.24■■□□□ 1.31
CHRD-215ENST00000485883 TSHZ1Q6ZSZ6 1077 aa23.24■■□□□ 1.31
CHRD-215ENST00000485883 EP400NLQ6ZTU2 488 aa23.24■■□□□ 1.31
CHRD-215ENST00000485883 NEK1Q96PY6 1258 aa23.24■■□□□ 1.31
CHRD-215ENST00000485883 NSUN3Q9H649 340 aaKnown RBP23.24■■□□□ 1.31
CHRD-215ENST00000485883 RIC8AQ9NPQ8 531 aa23.24■■□□□ 1.31
CHRD-215ENST00000485883 ADGRA3Q8IWK6 1321 aa23.24■■□□□ 1.31
CHRD-215ENST00000485883 NLRC5Q86WI3 1866 aa23.24■■□□□ 1.31
CHRD-215ENST00000485883 C5orf67F2Z3F1 127 aa23.23■■□□□ 1.31
CHRD-215ENST00000485883 PI4K2BG5E9Z4 385 aa23.23■■□□□ 1.31
CHRD-215ENST00000485883 GRM6O15303 877 aa23.23■■□□□ 1.31
CHRD-215ENST00000485883 CD52P31358 61 aa23.23■■□□□ 1.31
CHRD-215ENST00000485883 BMPR1AP36894 532 aa23.23■■□□□ 1.31
CHRD-215ENST00000485883 ACTR2P61160 394 aa23.23■■□□□ 1.31
CHRD-215ENST00000485883 EXOSC10Q01780 885 aaKnown RBP23.23■■□□□ 1.31
CHRD-215ENST00000485883 ITGB3BPQ13352 177 aaPredicted RBP23.23■■□□□ 1.31
CHRD-215ENST00000485883 PLCB4Q15147 1175 aa23.23■■□□□ 1.31
CHRD-215ENST00000485883 RTN4RL1Q86UN2 441 aaPredicted RBP23.23■■□□□ 1.31
CHRD-215ENST00000485883 RASEFQ8IZ41 740 aa23.23■■□□□ 1.31
CHRD-215ENST00000485883 GJD3Q8N144 294 aa23.23■■□□□ 1.31
CHRD-215ENST00000485883 ZNF689Q96CS4 500 aaPredicted RBP23.23■■□□□ 1.31
CHRD-215ENST00000485883 PABPC5Q96DU9 382 aaKnown RBP23.23■■□□□ 1.31
CHRD-215ENST00000485883 TMEM260Q9NX78 707 aa23.23■■□□□ 1.31
CHRD-215ENST00000485883 TRPC6Q9Y210 931 aa23.23■■□□□ 1.31
CHRD-215ENST00000485883 V9GY48 417 aaPredicted RBP23.23■■□□□ 1.31
CHRD-215ENST00000485883 RRN3P2A6NIE6 340 aa23.22■■□□□ 1.31
CHRD-215ENST00000485883 CDC45O75419 566 aa23.22■■□□□ 1.31
CHRD-215ENST00000485883 CSPG5O95196 566 aa23.22■■□□□ 1.31
CHRD-215ENST00000485883 PLA2G5P39877 138 aa23.22■■□□□ 1.31
CHRD-215ENST00000485883 COL19A1Q14993 1142 aa23.22■■□□□ 1.31
CHRD-215ENST00000485883 RTN1Q16799 776 aa23.22■■□□□ 1.31
CHRD-215ENST00000485883 ADCK5Q3MIX3 580 aa23.22■■□□□ 1.31
CHRD-215ENST00000485883 ANO3Q9BYT9 981 aa23.22■■□□□ 1.31
CHRD-215ENST00000485883 AZI2Q9H6S1 392 aa23.22■■□□□ 1.31
CHRD-215ENST00000485883 AGO4Q9HCK5 861 aaKnown RBP23.22■■□□□ 1.31
CHRD-215ENST00000485883 RBM28Q9NW13 759 aaKnown RBP23.22■■□□□ 1.31
CHRD-215ENST00000485883 TTC3P53804 2025 aa23.21■■□□□ 1.31
CHRD-215ENST00000485883 STXBP3O00186 592 aa23.21■■□□□ 1.31
CHRD-215ENST00000485883 ZBTB43O43298 467 aa23.21■■□□□ 1.31
CHRD-215ENST00000485883 DGKIO75912 1065 aa23.21■■□□□ 1.31
CHRD-215ENST00000485883 STAT5BP51692 787 aa23.21■■□□□ 1.31
CHRD-215ENST00000485883 BTG3Q14201 252 aaPredicted RBP23.21■■□□□ 1.31
CHRD-215ENST00000485883 CEP55Q53EZ4 464 aa23.21■■□□□ 1.31
CHRD-215ENST00000485883 CLP1Q92989 425 aaKnown RBP23.21■■□□□ 1.31
CHRD-215ENST00000485883 SDF4Q9BRK5 362 aa23.21■■□□□ 1.31
CHRD-215ENST00000485883 FAM217BQ9NTX9 383 aaPredicted RBP23.21■■□□□ 1.31
CHRD-215ENST00000485883 CLDND1Q9NY35 253 aa23.21■■□□□ 1.31
CHRD-215ENST00000485883 NFASCO94856 1347 aa23.21■■□□□ 1.31
CHRD-215ENST00000485883 RALGAPA2Q2PPJ7 1873 aa23.2■■□□□ 1.3
CHRD-215ENST00000485883 SMCO2A6NFE2 343 aa23.2■■□□□ 1.3
CHRD-215ENST00000485883 GPR37L1O60883 481 aa23.2■■□□□ 1.3
CHRD-215ENST00000485883 RB1P06400 928 aa23.2■■□□□ 1.3
CHRD-215ENST00000485883 CDC27P30260 824 aa23.2■■□□□ 1.3
CHRD-215ENST00000485883 SSTR3P32745 418 aaPredicted RBP23.2■■□□□ 1.3
CHRD-215ENST00000485883 ADCY7P51828 1080 aa23.2■■□□□ 1.3
CHRD-215ENST00000485883 RNF20Q5VTR2 975 aa23.2■■□□□ 1.3
CHRD-215ENST00000485883 IER5Q5VY09 327 aa23.2■■□□□ 1.3
CHRD-215ENST00000485883 DHX32Q7L7V1 743 aaKnown RBP23.2■■□□□ 1.3
CHRD-215ENST00000485883 PLPPR4Q7Z2D5 763 aa23.2■■□□□ 1.3
CHRD-215ENST00000485883 FAM122AQ96E09 287 aa23.2■■□□□ 1.3
CHRD-215ENST00000485883 PCDHA2Q9Y5H9 948 aa23.2■■□□□ 1.3
CHRD-215ENST00000485883 TRPV2Q9Y5S1 764 aa23.2■■□□□ 1.3
CHRD-215ENST00000485883 POTEB3A0JP26 581 aa23.19■■□□□ 1.3
CHRD-215ENST00000485883 DDX39AO00148 427 aaKnown RBP23.19■■□□□ 1.3
CHRD-215ENST00000485883 CCNE2O96020 404 aa23.19■■□□□ 1.3
CHRD-215ENST00000485883 CENPBP07199 599 aaPredicted RBP23.19■■□□□ 1.3
CHRD-215ENST00000485883 LTBRP36941 435 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms