RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	PAQR3	Q6TCH7	311 aa		5.42	□□□□□ -1.54
FN1-222	ENST00000485567	TCEAL8	Q8IYN2	117 aa		5.42	□□□□□ -1.54
FN1-222	ENST00000485567	MYO1H	Q8N1T3	1032 aa		5.42	□□□□□ -1.54
FN1-222	ENST00000485567	LMBR1	Q8WVP7	490 aa		5.42	□□□□□ -1.54
FN1-222	ENST00000485567	CLEC4D	Q8WXI8	215 aa		5.42	□□□□□ -1.54
FN1-222	ENST00000485567	MYLIP	Q8WY64	445 aa		5.42	□□□□□ -1.54
FN1-222	ENST00000485567	ACAP3	Q96P50	834 aa		5.42	□□□□□ -1.54
FN1-222	ENST00000485567	RTFDC1	Q9BY42	306 aa	Predicted RBP	5.42	□□□□□ -1.54
FN1-222	ENST00000485567	TNFRSF12A	Q9NP84	129 aa		5.42	□□□□□ -1.54
FN1-222	ENST00000485567	TOPORS	Q9NS56	1045 aa	Predicted RBP	5.42	□□□□□ -1.54
FN1-222	ENST00000485567	MBNL3	Q9NUK0	354 aa	Known RBP	5.42	□□□□□ -1.54
FN1-222	ENST00000485567	GPR160	Q9UJ42	338 aa		5.42	□□□□□ -1.54
FN1-222	ENST00000485567	ZNF180	Q9UJW8	692 aa		5.42	□□□□□ -1.54
FN1-222	ENST00000485567	CTNND2	Q9UQB3	1225 aa		5.42	□□□□□ -1.54
FN1-222	ENST00000485567	TELO2	Q9Y4R8	837 aa		5.42	□□□□□ -1.54
FN1-222	ENST00000485567	GOLGA8A	A7E2F4	631 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	GOLGA8B	A8MQT2	603 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	PRC1	O43663	620 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	SNUPN	O95149	360 aa	Known RBP	5.41	□□□□□ -1.54
FN1-222	ENST00000485567	WNT11	O96014	354 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	DBH	P09172	617 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	U2AF1L5	P0DN76	240 aa	Predicted RBP	5.41	□□□□□ -1.54
FN1-222	ENST00000485567	ZSCAN20	P17040	1043 aa	Predicted RBP	5.41	□□□□□ -1.54
FN1-222	ENST00000485567	SSTR4	P31391	388 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	IARS	P41252	1262 aa	Known RBP	5.41	□□□□□ -1.54
FN1-222	ENST00000485567	RECQL	P46063	649 aa	Predicted RBP	5.41	□□□□□ -1.54
FN1-222	ENST00000485567	ERVFC1	P60507	584 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	ERVFRD-1	P60508	538 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	U2AF1	Q01081	240 aa	Known RBP eCLIP	5.41	□□□□□ -1.54
FN1-222	ENST00000485567	HLTF	Q14527	1009 aa	Known RBP eCLIP	5.41	□□□□□ -1.54
FN1-222	ENST00000485567	SLC9A5	Q14940	896 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	NR1I3	Q14994	352 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	TMEM132B	Q14DG7	1078 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	PLCL1	Q15111	1095 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	TIGD5	Q53EQ6	642 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	TMEM240	Q5SV17	173 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	FAM102B	Q5T8I3	360 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	ESRP1	Q6NXG1	681 aa	Known RBP	5.41	□□□□□ -1.54
FN1-222	ENST00000485567	PGM2L1	Q6PCE3	622 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	ORAI2	Q96SN7	254 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	C19orf44	Q9H6X5	657 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	RC3H2	Q9HBD1	1191 aa	Known RBP	5.41	□□□□□ -1.54
FN1-222	ENST00000485567	LUC7L	Q9NQ29	371 aa	Known RBP	5.41	□□□□□ -1.54
FN1-222	ENST00000485567	RIC8B	Q9NVN3	520 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	HSPBP1	Q9NZL4	362 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	ADAMTS6	Q9UKP5	1117 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	PALD1	Q9ULE6	856 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	MRFAP1	Q9Y605	127 aa		5.41	□□□□□ -1.54
FN1-222	ENST00000485567	FOXP2	O15409	715 aa		5.4	□□□□□ -1.54
FN1-222	ENST00000485567	LTF	P02788	710 aa		5.4	□□□□□ -1.54
FN1-222	ENST00000485567	ITGB7	P26010	798 aa		5.4	□□□□□ -1.54
FN1-222	ENST00000485567	GPR3	P46089	330 aa		5.4	□□□□□ -1.54
FN1-222	ENST00000485567	TBX4	P57082	545 aa		5.4	□□□□□ -1.54
FN1-222	ENST00000485567	PDCD1	Q15116	288 aa		5.4	□□□□□ -1.54
FN1-222	ENST00000485567	PCBP2	Q15366	365 aa	Known RBP eCLIP	5.4	□□□□□ -1.54
FN1-222	ENST00000485567	CATSPERE	Q5SY80	951 aa		5.4	□□□□□ -1.54
FN1-222	ENST00000485567	CXorf57	Q6NSI4	855 aa	Known RBP	5.4	□□□□□ -1.54
FN1-222	ENST00000485567	MILR1	Q7Z6M3	343 aa		5.4	□□□□□ -1.54
FN1-222	ENST00000485567	WDR75	Q8IWA0	830 aa	Known RBP	5.4	□□□□□ -1.54
FN1-222	ENST00000485567	RBM12B	Q8IXT5	1001 aa	Known RBP	5.4	□□□□□ -1.54
FN1-222	ENST00000485567	CPA6	Q8N4T0	437 aa		5.4	□□□□□ -1.54
FN1-222	ENST00000485567	JPH3	Q8WXH2	748 aa	Predicted RBP	5.4	□□□□□ -1.54
FN1-222	ENST00000485567	TSPAN17	Q96FV3	270 aa		5.4	□□□□□ -1.54
FN1-222	ENST00000485567	RHOBTB2	Q9BYZ6	727 aa		5.4	□□□□□ -1.54
FN1-222	ENST00000485567	MKS1	Q9NXB0	559 aa		5.4	□□□□□ -1.54
FN1-222	ENST00000485567	KCNG1	Q9UIX4	513 aa		5.4	□□□□□ -1.54
FN1-222	ENST00000485567	PNMA8B	Q9ULN7	279 aa	Predicted RBP	5.4	□□□□□ -1.54
FN1-222	ENST00000485567	ANKRD6	Q9Y2G4	727 aa		5.4	□□□□□ -1.54
FN1-222	ENST00000485567	YBX2	Q9Y2T7	364 aa	Known RBP	5.4	□□□□□ -1.54
FN1-222	ENST00000485567	GOLGA6C	A6NDK9	693 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	GOLGA6B	A6NDN3	693 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	ACOT7	O00154	380 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	KDM1A	O60341	852 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	MT-CO1	P00395	513 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	MPO	P05164	745 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	RNASE1	P07998	156 aa	Known RBP	5.39	□□□□□ -1.55
FN1-222	ENST00000485567	GOLGA6D	P0CG33	693 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	FAH	P16930	419 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	VCAM1	P19320	739 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	TRHR	P34981	398 aa	Predicted RBP	5.39	□□□□□ -1.55
FN1-222	ENST00000485567	AFM	P43652	599 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	SCAND1	P57086	179 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	MOGS	Q13724	837 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	PAN2	Q504Q3	1202 aa	Known RBP	5.39	□□□□□ -1.55
FN1-222	ENST00000485567	TP53INP2	Q8IXH6	220 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	TTC8	Q8TAM2	541 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	ABHD4	Q8TB40	342 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	SSH1	Q8WYL5	1049 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	E2F7	Q96AV8	911 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	ZNF496	Q96IT1	587 aa	Predicted RBP	5.39	□□□□□ -1.55
FN1-222	ENST00000485567	WNT8A	Q9H1J5	351 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	SLC52A1	Q9NWF4	448 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	GOLGA6A	Q9NYA3	693 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	IP6K2	Q9UHH9	426 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	GIT1	Q9Y2X7	761 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	LUC7L2	Q9Y383	392 aa	Known RBP	5.39	□□□□□ -1.55
FN1-222	ENST00000485567	SIT1	Q9Y3P8	196 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	ASB1	Q9Y576	335 aa		5.39	□□□□□ -1.55
FN1-222	ENST00000485567	CCDC194	A0A1B0GVG4	234 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	ZC3H12D	A2A288	527 aa	Known RBP	5.38	□□□□□ -1.55

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