RNA–Protein interactions for RNA: ENST00000485306.1

TRIM54-203, Transcript of tripartite motif containing 54, humanhuman

TSL 2

Gene TRIM54, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-203ENST00000485306 AZI2Q9H6S1 392 aa18.88■□□□□ 0.61
TRIM54-203ENST00000485306 YBX2Q9Y2T7 364 aaKnown RBP18.88■□□□□ 0.61
TRIM54-203ENST00000485306 TELO2Q9Y4R8 837 aa18.88■□□□□ 0.61
TRIM54-203ENST00000485306 NFASCO94856 1347 aa18.88■□□□□ 0.61
TRIM54-203ENST00000485306 MEIS1O00470 390 aa18.87■□□□□ 0.61
TRIM54-203ENST00000485306 MYO9BQ13459 2157 aa18.87■□□□□ 0.61
TRIM54-203ENST00000485306 GPNMBQ14956 572 aa18.87■□□□□ 0.61
TRIM54-203ENST00000485306 PPP2R2DQ66LE6 453 aa18.87■□□□□ 0.61
TRIM54-203ENST00000485306 NIPA1Q7RTP0 329 aa18.87■□□□□ 0.61
TRIM54-203ENST00000485306 HERC6Q8IVU3 1022 aa18.87■□□□□ 0.61
TRIM54-203ENST00000485306 CCDC83Q8IWF9 413 aa18.87■□□□□ 0.61
TRIM54-203ENST00000485306 NECAB1Q8N987 351 aa18.87■□□□□ 0.61
TRIM54-203ENST00000485306 PRDM12Q9H4Q4 367 aa18.87■□□□□ 0.61
TRIM54-203ENST00000485306 VPS54Q9P1Q0 977 aa18.87■□□□□ 0.61
TRIM54-203ENST00000485306 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.87■□□□□ 0.61
TRIM54-203ENST00000485306 ADAMTS3O15072 1205 aa18.86■□□□□ 0.61
TRIM54-203ENST00000485306 LGR5O75473 907 aa18.86■□□□□ 0.61
TRIM54-203ENST00000485306 CYP3A4P08684 503 aa18.86■□□□□ 0.61
TRIM54-203ENST00000485306 ARP10275 920 aa18.86■□□□□ 0.61
TRIM54-203ENST00000485306 TRAF7Q6Q0C0 670 aa18.86■□□□□ 0.61
TRIM54-203ENST00000485306 ZBED2Q9BTP6 218 aa18.86■□□□□ 0.61
TRIM54-203ENST00000485306 AGO4Q9HCK5 861 aaKnown RBP18.86■□□□□ 0.61
TRIM54-203ENST00000485306 DEXIO95424 95 aa18.85■□□□□ 0.61
TRIM54-203ENST00000485306 MYOGP15173 224 aa18.85■□□□□ 0.61
TRIM54-203ENST00000485306 WDR5P61964 334 aaKnown RBP18.85■□□□□ 0.61
TRIM54-203ENST00000485306 ADAM17P78536 824 aa18.85■□□□□ 0.61
TRIM54-203ENST00000485306 HMGN5P82970 282 aaKnown RBP18.85■□□□□ 0.61
TRIM54-203ENST00000485306 ST3GAL1Q11201 340 aa18.85■□□□□ 0.61
TRIM54-203ENST00000485306 PPFIA1Q13136 1202 aa18.85■□□□□ 0.61
TRIM54-203ENST00000485306 RSPH3Q86UC2 560 aa18.85■□□□□ 0.61
TRIM54-203ENST00000485306 PLA2G4DQ86XP0 818 aa18.85■□□□□ 0.61
TRIM54-203ENST00000485306 LMBR1Q8WVP7 490 aa18.85■□□□□ 0.61
TRIM54-203ENST00000485306 SH3GLB2Q9NR46 395 aa18.85■□□□□ 0.61
TRIM54-203ENST00000485306 STK36Q9NRP7 1315 aa18.84■□□□□ 0.61
TRIM54-203ENST00000485306 RRN3P2A6NIE6 340 aa18.84■□□□□ 0.61
TRIM54-203ENST00000485306 TLL1O43897 1013 aa18.84■□□□□ 0.61
TRIM54-203ENST00000485306 MARK3P27448 753 aa18.84■□□□□ 0.61
TRIM54-203ENST00000485306 ACTR2P61160 394 aa18.84■□□□□ 0.61
TRIM54-203ENST00000485306 TAF2Q6P1X5 1199 aa18.84■□□□□ 0.61
TRIM54-203ENST00000485306 PLPPR4Q7Z2D5 763 aa18.84■□□□□ 0.61
TRIM54-203ENST00000485306 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.84■□□□□ 0.61
TRIM54-203ENST00000485306 RPLP2P05387 115 aaKnown RBP18.83■□□□□ 0.6
TRIM54-203ENST00000485306 CA3P07451 260 aa18.83■□□□□ 0.6
TRIM54-203ENST00000485306 STAT5BP51692 787 aa18.83■□□□□ 0.6
TRIM54-203ENST00000485306 NLRP5P59047 1200 aa18.83■□□□□ 0.6
TRIM54-203ENST00000485306 MBTPS1Q14703 1052 aa18.83■□□□□ 0.6
TRIM54-203ENST00000485306 GRIK4Q16099 956 aa18.83■□□□□ 0.6
TRIM54-203ENST00000485306 NSUN7Q8NE18 718 aaKnown RBP18.83■□□□□ 0.6
TRIM54-203ENST00000485306 RASGRP4Q8TDF6 673 aa18.83■□□□□ 0.6
TRIM54-203ENST00000485306 CRYGNQ8WXF5 182 aa18.83■□□□□ 0.6
TRIM54-203ENST00000485306 WASF1Q92558 559 aa18.83■□□□□ 0.6
TRIM54-203ENST00000485306 SEPT8Q92599 483 aa18.83■□□□□ 0.6
TRIM54-203ENST00000485306 DAXXQ9UER7 740 aaPredicted RBP18.83■□□□□ 0.6
TRIM54-203ENST00000485306 KIF3AQ9Y496 699 aa18.83■□□□□ 0.6
TRIM54-203ENST00000485306 CDH23Q9H251 3354 aa18.82■□□□□ 0.6
TRIM54-203ENST00000485306 FAM86B1E9PN63 330 aa18.82■□□□□ 0.6
TRIM54-203ENST00000485306 CTDNEP1O95476 244 aa18.82■□□□□ 0.6
TRIM54-203ENST00000485306 HSP90AA1P07900 732 aaKnown RBP18.82■□□□□ 0.6
TRIM54-203ENST00000485306 CTSHP09668 335 aa18.82■□□□□ 0.6
TRIM54-203ENST00000485306 FAM86B2P0C5J1 330 aa18.82■□□□□ 0.6
TRIM54-203ENST00000485306 IGFBP4P22692 258 aa18.82■□□□□ 0.6
TRIM54-203ENST00000485306 SLC26A2P50443 739 aa18.82■□□□□ 0.6
TRIM54-203ENST00000485306 SETQ01105 290 aaPredicted RBP18.82■□□□□ 0.6
TRIM54-203ENST00000485306 ITGB3BPQ13352 177 aaPredicted RBP18.82■□□□□ 0.6
TRIM54-203ENST00000485306 PLEKHG4Q58EX7 1191 aa18.82■□□□□ 0.6
TRIM54-203ENST00000485306 FAM26DQ5JW98 314 aa18.82■□□□□ 0.6
TRIM54-203ENST00000485306 RPAINQ86UA6 219 aa18.82■□□□□ 0.6
TRIM54-203ENST00000485306 DBF4BQ8NFT6 615 aa18.82■□□□□ 0.6
TRIM54-203ENST00000485306 TBC1D22BQ9NU19 505 aa18.82■□□□□ 0.6
TRIM54-203ENST00000485306 TCEAL9Q9UHQ7 104 aa18.82■□□□□ 0.6
TRIM54-203ENST00000485306 TUBE1Q9UJT0 475 aa18.82■□□□□ 0.6
TRIM54-203ENST00000485306 TRPC6Q9Y210 931 aa18.82■□□□□ 0.6
TRIM54-203ENST00000485306 IPO5O00410 1097 aaKnown RBP18.81■□□□□ 0.6
TRIM54-203ENST00000485306 ATG7O95352 703 aa18.81■□□□□ 0.6
TRIM54-203ENST00000485306 AMHP03971 560 aa18.81■□□□□ 0.6
TRIM54-203ENST00000485306 FAM160B1Q5W0V3 765 aa18.81■□□□□ 0.6
TRIM54-203ENST00000485306 FAM177A1Q8N128 213 aaPredicted RBP18.81■□□□□ 0.6
TRIM54-203ENST00000485306 AIFM3Q96NN9 605 aa18.81■□□□□ 0.6
TRIM54-203ENST00000485306 PCYT2Q99447 389 aa18.81■□□□□ 0.6
TRIM54-203ENST00000485306 RAD9AQ99638 391 aa18.81■□□□□ 0.6
TRIM54-203ENST00000485306 ZNF577Q9BSK1 485 aa18.81■□□□□ 0.6
TRIM54-203ENST00000485306 SMC3Q9UQE7 1217 aa18.81■□□□□ 0.6
TRIM54-203ENST00000485306 IGLV3-22A0A075B6J6 115 aa18.8■□□□□ 0.6
TRIM54-203ENST00000485306 MBLAC1A4D2B0 266 aaPredicted RBP18.8■□□□□ 0.6
TRIM54-203ENST00000485306 DDX39AO00148 427 aaKnown RBP18.8■□□□□ 0.6
TRIM54-203ENST00000485306 DLL1O00548 723 aa18.8■□□□□ 0.6
TRIM54-203ENST00000485306 BACH1O14867 736 aa18.8■□□□□ 0.6
TRIM54-203ENST00000485306 GJB5O95377 273 aa18.8■□□□□ 0.6
TRIM54-203ENST00000485306 INSRRP14616 1297 aa18.8■□□□□ 0.6
TRIM54-203ENST00000485306 USP11P51784 963 aa18.8■□□□□ 0.6
TRIM54-203ENST00000485306 IGBP1P78318 339 aa18.8■□□□□ 0.6
TRIM54-203ENST00000485306 DEFB103AP81534 67 aa18.8■□□□□ 0.6
TRIM54-203ENST00000485306 MIS18BP1Q6P0N0 1132 aa18.8■□□□□ 0.6
TRIM54-203ENST00000485306 APBB2Q92870 758 aa18.8■□□□□ 0.6
TRIM54-203ENST00000485306 ORC3Q9UBD5 711 aaPredicted RBP18.8■□□□□ 0.6
TRIM54-203ENST00000485306 PCDHA4Q9UN74 947 aa18.8■□□□□ 0.6
TRIM54-203ENST00000485306 POTEB3A0JP26 581 aa18.79■□□□□ 0.6
TRIM54-203ENST00000485306 DTNBO60941 627 aa18.79■□□□□ 0.6
TRIM54-203ENST00000485306 CIITAP33076 1130 aa18.79■□□□□ 0.6
TRIM54-203ENST00000485306 PLCB4Q15147 1175 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms