RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 GIMAP8Q8ND71 665 aaPredicted RBP6.33□□□□□ -1.4
SMC4-215ENST00000484799 PMFBP1Q8TBY8 1022 aa6.33□□□□□ -1.4
SMC4-215ENST00000484799 DVL3Q92997 716 aaPredicted RBP6.33□□□□□ -1.4
SMC4-215ENST00000484799 ARMC5Q96C12 935 aa6.33□□□□□ -1.4
SMC4-215ENST00000484799 C8orf37Q96NL8 207 aa6.33□□□□□ -1.4
SMC4-215ENST00000484799 DEPDC7Q96QD5 511 aa6.33□□□□□ -1.4
SMC4-215ENST00000484799 ADAM29Q9UKF5 820 aa6.33□□□□□ -1.4
SMC4-215ENST00000484799 TCAF1Q9Y4C2 921 aa6.33□□□□□ -1.4
SMC4-215ENST00000484799 ESYT3A0FGR9 886 aa6.32□□□□□ -1.4
SMC4-215ENST00000484799 ZNF839A8K0R7 811 aa6.32□□□□□ -1.4
SMC4-215ENST00000484799 DIAPH1O60610 1272 aaKnown RBP6.32□□□□□ -1.4
SMC4-215ENST00000484799 RANGAP1P46060 587 aaPredicted RBP6.32□□□□□ -1.4
SMC4-215ENST00000484799 DBPQ10586 325 aaPredicted RBP6.32□□□□□ -1.4
SMC4-215ENST00000484799 HABP4Q5JVS0 413 aaKnown RBP6.32□□□□□ -1.4
SMC4-215ENST00000484799 PROSER1Q86XN7 944 aa6.32□□□□□ -1.4
SMC4-215ENST00000484799 PTRH1Q86Y79 214 aaKnown RBP6.32□□□□□ -1.4
SMC4-215ENST00000484799 PCDH19Q8TAB3 1148 aa6.32□□□□□ -1.4
SMC4-215ENST00000484799 CARD11Q9BXL7 1154 aa6.32□□□□□ -1.4
SMC4-215ENST00000484799 PPP4R1LQ9P1A2 415 aa6.32□□□□□ -1.4
SMC4-215ENST00000484799 WASF3Q9UPY6 502 aa6.32□□□□□ -1.4
SMC4-215ENST00000484799 MRPS23Q9Y3D9 190 aaKnown RBP6.32□□□□□ -1.4
SMC4-215ENST00000484799 CCDC66A2RUB6 948 aa6.31□□□□□ -1.4
SMC4-215ENST00000484799 ADCY3O60266 1144 aa6.31□□□□□ -1.4
SMC4-215ENST00000484799 CRTAMO95727 393 aa6.31□□□□□ -1.4
SMC4-215ENST00000484799 KNG1P01042 644 aa6.31□□□□□ -1.4
SMC4-215ENST00000484799 USP10Q14694 798 aaKnown RBP6.31□□□□□ -1.4
SMC4-215ENST00000484799 PKN3Q6P5Z2 889 aa6.31□□□□□ -1.4
SMC4-215ENST00000484799 LMF1Q96S06 567 aa6.31□□□□□ -1.4
SMC4-215ENST00000484799 PDGFDQ9GZP0 370 aaPredicted RBP6.31□□□□□ -1.4
SMC4-215ENST00000484799 SRPK3Q9UPE1 567 aa6.31□□□□□ -1.4
SMC4-215ENST00000484799 TELO2Q9Y4R8 837 aa6.31□□□□□ -1.4
SMC4-215ENST00000484799 CCDC163A0A0D9SF12 145 aa6.3□□□□□ -1.4
SMC4-215ENST00000484799 ACOT7O00154 380 aa6.3□□□□□ -1.4
SMC4-215ENST00000484799 CUTAO60888 179 aa6.3□□□□□ -1.4
SMC4-215ENST00000484799 ZNF20P17024 532 aa6.3□□□□□ -1.4
SMC4-215ENST00000484799 EPHB4P54760 987 aa6.3□□□□□ -1.4
SMC4-215ENST00000484799 RBL2Q08999 1139 aa6.3□□□□□ -1.4
SMC4-215ENST00000484799 FOXB2Q5VYV0 432 aa6.3□□□□□ -1.4
SMC4-215ENST00000484799 ZNF585AQ6P3V2 769 aa6.3□□□□□ -1.4
SMC4-215ENST00000484799 GPR155Q7Z3F1 870 aa6.3□□□□□ -1.4
SMC4-215ENST00000484799 REXO1L1PQ8IX06 675 aa6.3□□□□□ -1.4
SMC4-215ENST00000484799 MBD6Q96DN6 1003 aa6.3□□□□□ -1.4
SMC4-215ENST00000484799 AJUBAQ96IF1 538 aa6.3□□□□□ -1.4
SMC4-215ENST00000484799 DNAJC7Q99615 494 aa6.3□□□□□ -1.4
SMC4-215ENST00000484799 TMPRSS5Q9H3S3 457 aa6.3□□□□□ -1.4
SMC4-215ENST00000484799 JAG2Q9Y219 1238 aa6.3□□□□□ -1.4
SMC4-215ENST00000484799 KLHL18O94889 574 aa6.29□□□□□ -1.4
SMC4-215ENST00000484799 POLD1P28340 1107 aa6.29□□□□□ -1.4
SMC4-215ENST00000484799 JAM2P57087 298 aa6.29□□□□□ -1.4
SMC4-215ENST00000484799 FIGNQ5HY92 759 aa6.29□□□□□ -1.4
SMC4-215ENST00000484799 OTOP2Q7RTS6 562 aa6.29□□□□□ -1.4
SMC4-215ENST00000484799 ZSWIM2Q8NEG5 633 aa6.29□□□□□ -1.4
SMC4-215ENST00000484799 SH3RF3Q8TEJ3 882 aaPredicted RBP6.29□□□□□ -1.4
SMC4-215ENST00000484799 LRRC37BQ96QE4 947 aa6.29□□□□□ -1.4
SMC4-215ENST00000484799 KRTAP9-3Q9BYQ3 159 aa6.29□□□□□ -1.4
SMC4-215ENST00000484799 C12orf65Q9H3J6 166 aaKnown RBP6.29□□□□□ -1.4
SMC4-215ENST00000484799 SEMA4AQ9H3S1 761 aa6.29□□□□□ -1.4
SMC4-215ENST00000484799 SEC61A2Q9H9S3 476 aa6.29□□□□□ -1.4
SMC4-215ENST00000484799 KCND1Q9NSA2 647 aa6.29□□□□□ -1.4
SMC4-215ENST00000484799 FAM90A27PA6NNH2 459 aa6.28□□□□□ -1.4
SMC4-215ENST00000484799 ARVCFO00192 962 aa6.28□□□□□ -1.4
SMC4-215ENST00000484799 SCDO00767 359 aa6.28□□□□□ -1.4
SMC4-215ENST00000484799 ZNF623O75123 536 aa6.28□□□□□ -1.4
SMC4-215ENST00000484799 HIP1RO75146 1068 aa6.28□□□□□ -1.4
SMC4-215ENST00000484799 PTGS1P23219 599 aa6.28□□□□□ -1.4
SMC4-215ENST00000484799 RAC3P60763 192 aa6.28□□□□□ -1.4
SMC4-215ENST00000484799 ZMAT1Q5H9K5 638 aa6.28□□□□□ -1.4
SMC4-215ENST00000484799 HIPK4Q8NE63 616 aa6.28□□□□□ -1.4
SMC4-215ENST00000484799 SH3RF2Q8TEC5 729 aa6.28□□□□□ -1.4
SMC4-215ENST00000484799 EXOC2Q96KP1 924 aa6.28□□□□□ -1.4
SMC4-215ENST00000484799 KLC2Q9H0B6 622 aa6.28□□□□□ -1.4
SMC4-215ENST00000484799 INCENPQ9NQS7 918 aa6.28□□□□□ -1.4
SMC4-215ENST00000484799 GALNT8Q9NY28 637 aa6.28□□□□□ -1.4
SMC4-215ENST00000484799 SNTG2Q9NY99 539 aa6.28□□□□□ -1.4
SMC4-215ENST00000484799 CBLCQ9ULV8 474 aa6.28□□□□□ -1.4
SMC4-215ENST00000484799 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.27□□□□□ -1.41
SMC4-215ENST00000484799 TCRBV5S4A2TA0A5A2 114 aa6.27□□□□□ -1.41
SMC4-215ENST00000484799 MAN2B1O00754 1011 aa6.27□□□□□ -1.41
SMC4-215ENST00000484799 KCNK3O14649 394 aa6.27□□□□□ -1.41
SMC4-215ENST00000484799 WNT9AO14904 365 aa6.27□□□□□ -1.41
SMC4-215ENST00000484799 CLASP2O75122 1294 aaKnown RBP6.27□□□□□ -1.41
SMC4-215ENST00000484799 IL18BPO95998 194 aa6.27□□□□□ -1.41
SMC4-215ENST00000484799 COL6A1P12109 1028 aa6.27□□□□□ -1.41
SMC4-215ENST00000484799 CXXC5Q7LFL8 322 aaKnown RBP6.27□□□□□ -1.41
SMC4-215ENST00000484799 CISD2Q8N5K1 135 aaKnown RBP6.27□□□□□ -1.41
SMC4-215ENST00000484799 C2orf69Q8N8R5 385 aa6.27□□□□□ -1.41
SMC4-215ENST00000484799 MKL1Q969V6 931 aa6.27□□□□□ -1.41
SMC4-215ENST00000484799 SCYL1Q96KG9 808 aa6.27□□□□□ -1.41
SMC4-215ENST00000484799 PTPN18Q99952 460 aa6.27□□□□□ -1.41
SMC4-215ENST00000484799 C1QTNF3Q9BXJ4 246 aa6.27□□□□□ -1.41
SMC4-215ENST00000484799 KRTAP4-11Q9BYQ6 195 aa6.27□□□□□ -1.41
SMC4-215ENST00000484799 KRTAP4-2Q9BYR5 136 aa6.27□□□□□ -1.41
SMC4-215ENST00000484799 SFMBT1Q9UHJ3 866 aa6.27□□□□□ -1.41
SMC4-215ENST00000484799 FBXO10Q9UK96 956 aa6.27□□□□□ -1.41
SMC4-215ENST00000484799 SLC4A7Q9Y6M7 1214 aa6.27□□□□□ -1.41
SMC4-215ENST00000484799 FAM221BA6H8Z2 402 aa6.26□□□□□ -1.41
SMC4-215ENST00000484799 GPR42O15529 346 aa6.26□□□□□ -1.41
SMC4-215ENST00000484799 AMY2AP04746 511 aa6.26□□□□□ -1.41
SMC4-215ENST00000484799 C6orf222P0C671 652 aaPredicted RBP6.26□□□□□ -1.41
SMC4-215ENST00000484799 AMY2BP19961 511 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms