RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.62■■□□□ 1.05
LIMS2-215ENST00000484252 SMARCAL1Q9NZC9 954 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 ARMCX3Q9UH62 379 aaPredicted RBP21.62■■□□□ 1.05
LIMS2-215ENST00000484252 HDAC9Q9UKV0 1011 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 A0A087X0T9 212 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 POTEFA5A3E0 1075 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 FAM228BP0C875 321 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 POTEIP0CG38 1075 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 ANXA13P27216 316 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 KNOP1Q1ED39 458 aaKnown RBP21.62■■□□□ 1.05
LIMS2-215ENST00000484252 POTEGQ6S5H5 508 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 POTEEQ6S8J3 1075 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 CATSPER3Q86XQ3 398 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 SEPT12Q8IYM1 358 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 KCTD17Q8N5Z5 321 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 FAM133AQ8N9E0 248 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 FAM20AQ96MK3 541 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 MRIQ9BWK5 157 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 AMNQ9BXJ7 453 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 ZHX3Q9H4I2 956 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 GDF3Q9NR23 364 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 EHD2Q9NZN4 543 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 ATP8B3O60423 1300 aa21.61■■□□□ 1.05
LIMS2-215ENST00000484252 MYH10P35580 1976 aa21.61■■□□□ 1.05
LIMS2-215ENST00000484252 MYO1CO00159 1063 aa21.61■■□□□ 1.05
LIMS2-215ENST00000484252 PDXKO00764 312 aa21.61■■□□□ 1.05
LIMS2-215ENST00000484252 HSF2BPO75031 334 aa21.61■■□□□ 1.05
LIMS2-215ENST00000484252 CRKP46108 304 aa21.61■■□□□ 1.05
LIMS2-215ENST00000484252 NFIAQ12857 509 aa21.61■■□□□ 1.05
LIMS2-215ENST00000484252 CERKLQ49MI3 558 aaPredicted RBP21.61■■□□□ 1.05
LIMS2-215ENST00000484252 EPM2AIP1Q7L775 607 aaPredicted RBP21.61■■□□□ 1.05
LIMS2-215ENST00000484252 DNAJC18Q9H819 358 aa21.61■■□□□ 1.05
LIMS2-215ENST00000484252 YY1AP1Q9H869 796 aa21.61■■□□□ 1.05
LIMS2-215ENST00000484252 G3V3G9 751 aa21.6■■□□□ 1.05
LIMS2-215ENST00000484252 AFPP02771 609 aaKnown RBP21.6■■□□□ 1.05
LIMS2-215ENST00000484252 IFI16Q16666 785 aaKnown RBP21.6■■□□□ 1.05
LIMS2-215ENST00000484252 PRR16Q569H4 304 aa21.6■■□□□ 1.05
LIMS2-215ENST00000484252 DCAF8Q5TAQ9 597 aa21.6■■□□□ 1.05
LIMS2-215ENST00000484252 MS4A14Q96JA4 679 aa21.6■■□□□ 1.05
LIMS2-215ENST00000484252 RUFY1Q96T51 708 aa21.6■■□□□ 1.05
LIMS2-215ENST00000484252 METTL14Q9HCE5 456 aaKnown RBP21.6■■□□□ 1.05
LIMS2-215ENST00000484252 PI4KBQ9UBF8 816 aa21.6■■□□□ 1.05
LIMS2-215ENST00000484252 ADAMTS1Q9UHI8 967 aa21.6■■□□□ 1.05
LIMS2-215ENST00000484252 RSPH14Q9UHP6 348 aa21.6■■□□□ 1.05
LIMS2-215ENST00000484252 NPR1P16066 1061 aa21.6■■□□□ 1.05
LIMS2-215ENST00000484252 APBA1Q02410 837 aa21.6■■□□□ 1.05
LIMS2-215ENST00000484252 PAK2Q13177 524 aa21.6■■□□□ 1.05
LIMS2-215ENST00000484252 DOK7Q18PE1 504 aa21.6■■□□□ 1.05
LIMS2-215ENST00000484252 BMT2Q1RMZ1 405 aa21.6■■□□□ 1.05
LIMS2-215ENST00000484252 AFF2P51816 1311 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 SLC16A3O15427 465 aaKnown RBP21.59■■□□□ 1.05
LIMS2-215ENST00000484252 FTCDO95954 541 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 SREBF1P36956 1147 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 MMP14P50281 582 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 ARID5AQ03989 594 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 MEX3CQ5U5Q3 659 aaKnown RBP21.59■■□□□ 1.05
LIMS2-215ENST00000484252 INPP4AQ96PE3 977 aaPredicted RBP21.59■■□□□ 1.05
LIMS2-215ENST00000484252 FBXL5Q9UKA1 691 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 ADAMTSL1Q8N6G6 1762 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 A6NNZ2 444 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 RAD21O60216 631 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 SPATA31C1P0DKV0 1188 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 RPL13P26373 211 aaKnown RBP21.59■■□□□ 1.05
LIMS2-215ENST00000484252 HMGB2P26583 209 aaKnown RBP21.59■■□□□ 1.05
LIMS2-215ENST00000484252 CIITAP33076 1130 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 TUBB8Q3ZCM7 444 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 DPY19L2P1Q6NXN4 242 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 IRF2BP2Q7Z5L9 587 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 SFR1Q86XK3 245 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 GMCL1P1Q8NEA9 526 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 TAF4BQ92750 862 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 SPAG5Q96R06 1193 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 HINFPQ9BQA5 517 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 REEP2Q9BRK0 252 aa21.59■■□□□ 1.05
LIMS2-215ENST00000484252 TMX4Q9H1E5 349 aaPredicted RBP21.59■■□□□ 1.05
LIMS2-215ENST00000484252 KIF13BQ9NQT8 1826 aa21.58■■□□□ 1.05
LIMS2-215ENST00000484252 SPDYE3A6NKU9 549 aa21.58■■□□□ 1.05
LIMS2-215ENST00000484252 NPM3O75607 178 aaKnown RBP21.58■■□□□ 1.05
LIMS2-215ENST00000484252 XRCC5P13010 732 aaKnown RBP21.58■■□□□ 1.05
LIMS2-215ENST00000484252 ALDH1B1P30837 517 aa21.58■■□□□ 1.05
LIMS2-215ENST00000484252 CASP5P51878 434 aa21.58■■□□□ 1.05
LIMS2-215ENST00000484252 PABPC4Q13310 644 aaKnown RBP eCLIP21.58■■□□□ 1.05
LIMS2-215ENST00000484252 TMEM179Q6ZVK1 233 aa21.58■■□□□ 1.05
LIMS2-215ENST00000484252 FBXO11Q86XK2 927 aa21.58■■□□□ 1.05
LIMS2-215ENST00000484252 ZFPM1Q8IX07 1006 aa21.58■■□□□ 1.05
LIMS2-215ENST00000484252 LENG9Q96B70 501 aa21.58■■□□□ 1.05
LIMS2-215ENST00000484252 GMCL1Q96IK5 515 aa21.58■■□□□ 1.05
LIMS2-215ENST00000484252 UIMC1Q96RL1 719 aa21.58■■□□□ 1.05
LIMS2-215ENST00000484252 IDI2Q9BXS1 227 aa21.58■■□□□ 1.05
LIMS2-215ENST00000484252 TYW1Q9NV66 732 aaKnown RBP21.58■■□□□ 1.05
LIMS2-215ENST00000484252 HEXIM1O94992 359 aaKnown RBP21.57■■□□□ 1.04
LIMS2-215ENST00000484252 UCHL3P15374 230 aa21.57■■□□□ 1.04
LIMS2-215ENST00000484252 PRKCIP41743 596 aa21.57■■□□□ 1.04
LIMS2-215ENST00000484252 TNNC1P63316 161 aa21.57■■□□□ 1.04
LIMS2-215ENST00000484252 EXOC3L4Q17RC7 722 aa21.57■■□□□ 1.04
LIMS2-215ENST00000484252 TATDN1Q6P1N9 297 aa21.57■■□□□ 1.04
LIMS2-215ENST00000484252 FOXR1Q6PIV2 292 aa21.57■■□□□ 1.04
LIMS2-215ENST00000484252 MREGQ8N565 214 aa21.57■■□□□ 1.04
LIMS2-215ENST00000484252 TSEN2Q8NCE0 465 aaKnown RBP21.57■■□□□ 1.04
LIMS2-215ENST00000484252 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms