RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 SLC9A2Q9UBY0 812 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 KIAA1024Q9UPX6 916 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 IGSF9BQ9UPX0 1349 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 DOCK3Q8IZD9 2030 aa9.24□□□□□ -0.93
USP4-210ENST00000483212 DOCK5Q9H7D0 1870 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 A0A087WWV3 80 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.23□□□□□ -0.93
USP4-210ENST00000483212 GSTTP1A0A1W2PQM5 241 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 E9PMD0 336 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 ADCY6O43306 1168 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 GTPBP6O43824 516 aaPredicted RBP9.23□□□□□ -0.93
USP4-210ENST00000483212 KLRC4O43908 158 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 ZNF862O60290 1169 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 GGPS1O95749 300 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 P4HBP07237 508 aaKnown RBP9.23□□□□□ -0.93
USP4-210ENST00000483212 SUPT20HL2P0C7V6 817 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 CASP1P29466 404 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 ADCYAP1R1P41586 468 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 FLT3LGP49771 235 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 SLC12A3P55017 1021 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 ARHGAP1Q07960 439 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 ACVR2BQ13705 512 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 NEDD9Q14511 834 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 MCM6Q14566 821 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 TTLL4Q14679 1199 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 ZRSR1Q15695 479 aaKnown RBP9.23□□□□□ -0.93
USP4-210ENST00000483212 CELF3Q5SZQ8 465 aaKnown RBP9.23□□□□□ -0.93
USP4-210ENST00000483212 CNNM4Q6P4Q7 775 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 LRSAM1Q6UWE0 723 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 METTL7BQ6UX53 244 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 CYFIP1Q7L576 1253 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 GAS2L3Q86XJ1 694 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 CCDC60Q8IWA6 550 aaPredicted RBP9.23□□□□□ -0.93
USP4-210ENST00000483212 CEP57L1Q8IYX8 460 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 DNAJC5GQ8N7S2 189 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 GIMAP8Q8ND71 665 aaPredicted RBP9.23□□□□□ -0.93
USP4-210ENST00000483212 BANK1Q8NDB2 785 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 CD99L2Q8TCZ2 262 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 TRIB2Q92519 343 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 LARP4BQ92615 738 aaKnown RBP9.23□□□□□ -0.93
USP4-210ENST00000483212 STAMQ92783 540 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 EMID1Q96A84 441 aaPredicted RBP9.23□□□□□ -0.93
USP4-210ENST00000483212 PCYT2Q99447 389 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 GPR20Q99678 358 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 LXNQ9BS40 222 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 ABHD16BQ9H3Z7 469 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 PCDHA5Q9Y5H7 936 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 PCDHA10Q9Y5I2 948 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 CASP8AP2Q9UKL3 1982 aa9.23□□□□□ -0.93
USP4-210ENST00000483212 PCNTO95613 3336 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 MYMKA6NI61 221 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 ZBTB39O15060 712 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 SORBS3O60504 671 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 LGR5O75473 907 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 EYA4O95677 639 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 MYL1P05976 194 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 PLA2G4BP0C869 781 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 TXNP10599 105 aaKnown RBP9.22□□□□□ -0.93
USP4-210ENST00000483212 SMPD1P17405 629 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 ATP4AP20648 1035 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 BMP6P22004 513 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 CYP2C19P33261 490 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 AFMP43652 599 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 QARSP47897 775 aaKnown RBP9.22□□□□□ -0.93
USP4-210ENST00000483212 PSMC5P62195 406 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 CUL4BQ13620 913 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 HSDL1Q3SXM5 330 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 DUSP28Q4G0W2 176 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 PRAMEF19Q5SWL8 479 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 GJC2Q5T442 439 aaPredicted RBP9.22□□□□□ -0.93
USP4-210ENST00000483212 IQSEC1Q6DN90 963 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 TPH2Q8IWU9 490 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 C4orf19Q8IY42 314 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 SYT2Q8N9I0 419 aaPredicted RBP9.22□□□□□ -0.93
USP4-210ENST00000483212 TRPV1Q8NER1 839 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 RASSF8Q8NHQ8 419 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 AFAP1L1Q8TED9 768 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 ZNF296Q8WUU4 475 aaPredicted RBP9.22□□□□□ -0.93
USP4-210ENST00000483212 CDK5RAP3Q96JB5 506 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 C7orf25Q9BPX7 421 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 ANP32EQ9BTT0 268 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 TRIM9Q9C026 710 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 BLZF1Q9H2G9 400 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 ZSWIM4Q9H7M6 989 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 SRRDQ9UH36 339 aa9.22□□□□□ -0.93
USP4-210ENST00000483212 GNEQ9Y223 722 aaKnown RBP9.22□□□□□ -0.93
USP4-210ENST00000483212 MAFBQ9Y5Q3 323 aaPredicted RBP9.22□□□□□ -0.93
USP4-210ENST00000483212 HTTP42858 3142 aa9.21□□□□□ -0.93
USP4-210ENST00000483212 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.21□□□□□ -0.94
USP4-210ENST00000483212 FKTNO75072 461 aa9.21□□□□□ -0.94
USP4-210ENST00000483212 PSAPP07602 524 aa9.21□□□□□ -0.94
USP4-210ENST00000483212 HOXD8P13378 290 aaPredicted RBP9.21□□□□□ -0.94
USP4-210ENST00000483212 CYBAP13498 195 aa9.21□□□□□ -0.94
USP4-210ENST00000483212 CYP11B2P19099 503 aa9.21□□□□□ -0.94
USP4-210ENST00000483212 SP4Q02446 784 aa9.21□□□□□ -0.94
USP4-210ENST00000483212 MAP2K1Q02750 393 aaPredicted RBP9.21□□□□□ -0.94
USP4-210ENST00000483212 TYRO3Q06418 890 aa9.21□□□□□ -0.94
USP4-210ENST00000483212 EHHADHQ08426 723 aa9.21□□□□□ -0.94
USP4-210ENST00000483212 MORC3Q14149 939 aa9.21□□□□□ -0.94
USP4-210ENST00000483212 KIF22Q14807 665 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms