RNA–Protein interactions for RNA: ENST00000483145.1

CCDC57-209, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-209ENST00000483145 SP4Q02446 784 aa11.77□□□□□ -0.53
CCDC57-209ENST00000483145 KRT79Q5XKE5 535 aa11.77□□□□□ -0.53
CCDC57-209ENST00000483145 ABHD15Q6UXT9 468 aa11.77□□□□□ -0.53
CCDC57-209ENST00000483145 SNX29Q8TEQ0 813 aa11.77□□□□□ -0.53
CCDC57-209ENST00000483145 AFG1LQ8WV93 481 aa11.77□□□□□ -0.53
CCDC57-209ENST00000483145 SEPT1Q8WYJ6 367 aa11.77□□□□□ -0.53
CCDC57-209ENST00000483145 MRPS27Q92552 414 aaKnown RBP11.77□□□□□ -0.53
CCDC57-209ENST00000483145 HSD17B14Q9BPX1 270 aa11.77□□□□□ -0.53
CCDC57-209ENST00000483145 EIF2AK1Q9BQI3 630 aaKnown RBP11.77□□□□□ -0.53
CCDC57-209ENST00000483145 MMTAG2Q9BU76 263 aaKnown RBP11.77□□□□□ -0.53
CCDC57-209ENST00000483145 POLR3CQ9BUI4 534 aaPredicted RBP11.77□□□□□ -0.53
CCDC57-209ENST00000483145 AP5M1Q9H0R1 490 aa11.77□□□□□ -0.53
CCDC57-209ENST00000483145 TELO2Q9Y4R8 837 aa11.77□□□□□ -0.53
CCDC57-209ENST00000483145 SAMM50Q9Y512 469 aa11.77□□□□□ -0.53
CCDC57-209ENST00000483145 EMSYQ7Z589 1322 aa11.77□□□□□ -0.53
CCDC57-209ENST00000483145 SYNRGQ9UMZ2 1314 aa11.77□□□□□ -0.53
CCDC57-209ENST00000483145 KDM3AQ9Y4C1 1321 aa11.77□□□□□ -0.53
CCDC57-209ENST00000483145 SCN10AQ9Y5Y9 1956 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 GSTTP1A0A1W2PQM5 241 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 CTAGE5O15320 804 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 DYNC1LI2O43237 492 aaPredicted RBP11.76□□□□□ -0.53
CCDC57-209ENST00000483145 PRPF40AO75400 957 aaKnown RBP11.76□□□□□ -0.53
CCDC57-209ENST00000483145 LGR5O75473 907 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 P4HBP07237 508 aaKnown RBP11.76□□□□□ -0.53
CCDC57-209ENST00000483145 RPA1P27694 616 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 CST5P28325 142 aaPredicted RBP11.76□□□□□ -0.53
CCDC57-209ENST00000483145 CDC25AP30304 524 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 TCF7P36402 384 aaPredicted RBP11.76□□□□□ -0.53
CCDC57-209ENST00000483145 UBA7P41226 1012 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 CPT1AP50416 773 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 FSCN1Q16658 493 aaKnown RBP11.76□□□□□ -0.53
CCDC57-209ENST00000483145 DGKDQ16760 1214 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 BRDTQ58F21 947 aaPredicted RBP11.76□□□□□ -0.53
CCDC57-209ENST00000483145 SPECC1Q5M775 1068 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 HYIQ5T013 277 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 LHX8Q68G74 356 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 USP49Q70CQ1 688 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 CABP7Q86V35 215 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 KCTD17Q8N5Z5 321 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 AFAP1L1Q8TED9 768 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 ATP6V0A1Q93050 837 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 EPSTI1Q96J88 318 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 SPC25Q9HBM1 224 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 TUFT1Q9NNX1 390 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 XPNPEP3Q9NQH7 507 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 LMBRD1Q9NUN5 540 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 FAM13BQ9NYF5 915 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 PCDH10Q9P2E7 1040 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 HPSEQ9Y251 543 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 IGSF9BQ9UPX0 1349 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 KAT6AQ92794 2004 aa11.76□□□□□ -0.53
CCDC57-209ENST00000483145 CEP290O15078 2479 aa11.75□□□□□ -0.53
CCDC57-209ENST00000483145 ADAMTS4O75173 837 aa11.75□□□□□ -0.53
CCDC57-209ENST00000483145 GADD45BO75293 160 aaPredicted RBP11.75□□□□□ -0.53
CCDC57-209ENST00000483145 PPFIA4O75335 1185 aa11.75□□□□□ -0.53
CCDC57-209ENST00000483145 MED24O75448 989 aa11.75□□□□□ -0.53
CCDC57-209ENST00000483145 LYPLA2O95372 231 aa11.75□□□□□ -0.53
CCDC57-209ENST00000483145 MYCNP04198 464 aaPredicted RBP11.75□□□□□ -0.53
CCDC57-209ENST00000483145 C6orf222P0C671 652 aaPredicted RBP11.75□□□□□ -0.53
CCDC57-209ENST00000483145 SPATA31C1P0DKV0 1188 aa11.75□□□□□ -0.53
CCDC57-209ENST00000483145 PFKFB1P16118 471 aa11.75□□□□□ -0.53
CCDC57-209ENST00000483145 CCT6AP40227 531 aaKnown RBP11.75□□□□□ -0.53
CCDC57-209ENST00000483145 QARSP47897 775 aaKnown RBP11.75□□□□□ -0.53
CCDC57-209ENST00000483145 MNX1P50219 401 aaPredicted RBP11.75□□□□□ -0.53
CCDC57-209ENST00000483145 SLC26A2P50443 739 aa11.75□□□□□ -0.53
CCDC57-209ENST00000483145 FXR1P51114 621 aaKnown RBP eCLIP11.75□□□□□ -0.53
CCDC57-209ENST00000483145 PSMC5P62195 406 aa11.75□□□□□ -0.53
CCDC57-209ENST00000483145 TMEM119Q4V9L6 283 aa11.75□□□□□ -0.53
CCDC57-209ENST00000483145 FAM160B1Q5W0V3 765 aa11.75□□□□□ -0.53
CCDC57-209ENST00000483145 CATSPER3Q86XQ3 398 aa11.75□□□□□ -0.53
CCDC57-209ENST00000483145 CCDC60Q8IWA6 550 aaPredicted RBP11.75□□□□□ -0.53
CCDC57-209ENST00000483145 FSIP1Q8NA03 581 aa11.75□□□□□ -0.53
CCDC57-209ENST00000483145 CALML4Q96GE6 196 aa11.75□□□□□ -0.53
CCDC57-209ENST00000483145 PYM1Q9BRP8 204 aaKnown RBP11.75□□□□□ -0.53
CCDC57-209ENST00000483145 LXNQ9BS40 222 aa11.75□□□□□ -0.53
CCDC57-209ENST00000483145 NT5C3AQ9H0P0 336 aa11.75□□□□□ -0.53
CCDC57-209ENST00000483145 AZI2Q9H6S1 392 aa11.75□□□□□ -0.53
CCDC57-209ENST00000483145 ZNF302Q9NR11 478 aa11.75□□□□□ -0.53
CCDC57-209ENST00000483145 RGL1Q9NZL6 768 aa11.75□□□□□ -0.53
CCDC57-209ENST00000483145 ZMYND8Q9ULU4 1186 aaPredicted RBP11.75□□□□□ -0.53
CCDC57-209ENST00000483145 POTEB3A0JP26 581 aa11.74□□□□□ -0.53
CCDC57-209ENST00000483145 BACH1O14867 736 aa11.74□□□□□ -0.53
CCDC57-209ENST00000483145 ZEB2O60315 1214 aa11.74□□□□□ -0.53
CCDC57-209ENST00000483145 KPNA6O60684 536 aa11.74□□□□□ -0.53
CCDC57-209ENST00000483145 DKC1O60832 514 aaKnown RBP eCLIP11.74□□□□□ -0.53
CCDC57-209ENST00000483145 SLITRK3O94933 977 aa11.74□□□□□ -0.53
CCDC57-209ENST00000483145 PGK1P00558 417 aa11.74□□□□□ -0.53
CCDC57-209ENST00000483145 LGALS2P05162 132 aa11.74□□□□□ -0.53
CCDC57-209ENST00000483145 PTMSP20962 102 aa11.74□□□□□ -0.53
CCDC57-209ENST00000483145 CYP4A11Q02928 519 aa11.74□□□□□ -0.53
CCDC57-209ENST00000483145 KARSQ15046 597 aaKnown RBP11.74□□□□□ -0.53
CCDC57-209ENST00000483145 UGCGQ16739 394 aa11.74□□□□□ -0.53
CCDC57-209ENST00000483145 SWSAP1Q6NVH7 229 aa11.74□□□□□ -0.53
CCDC57-209ENST00000483145 POTEBQ6S5H4 581 aa11.74□□□□□ -0.53
CCDC57-209ENST00000483145 CCDC73Q6ZRK6 1079 aa11.74□□□□□ -0.53
CCDC57-209ENST00000483145 PLPPR4Q7Z2D5 763 aa11.74□□□□□ -0.53
CCDC57-209ENST00000483145 C4orf19Q8IY42 314 aa11.74□□□□□ -0.53
CCDC57-209ENST00000483145 ARRDC4Q8NCT1 418 aa11.74□□□□□ -0.53
CCDC57-209ENST00000483145 BANK1Q8NDB2 785 aa11.74□□□□□ -0.53
CCDC57-209ENST00000483145 KLHDC9Q8NEP7 349 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms