RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 SFMBT2Q5VUG0 894 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 ANKRD20A3Q5VUR7 823 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 CENPPQ6IPU0 288 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 TMED8Q6PL24 325 aaPredicted RBP12.9□□□□□ -0.34
VTI1A-205ENST00000483122 SEPT12Q8IYM1 358 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 ANKS1AQ92625 1134 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 PRMT1Q99873 361 aaKnown RBP12.9□□□□□ -0.34
VTI1A-205ENST00000483122 PLA2G12BQ9BX93 195 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 STK38LQ9Y2H1 464 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 NOC2LQ9Y3T9 749 aaKnown RBP12.9□□□□□ -0.34
VTI1A-205ENST00000483122 EVI5O60447 810 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 NOL4O94818 638 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 VIMP08670 466 aaKnown RBP12.89□□□□□ -0.35
VTI1A-205ENST00000483122 MYBL1P10243 752 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 GNAT2P19087 354 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 RPS6KA3P51812 740 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 BLIDQ8IZY5 108 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 ACTRT1Q8TDG2 376 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 TRIM31Q9BZY9 425 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 TANGO6Q9C0B7 1094 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 ZFATQ9P243 1243 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 CD2APQ9Y5K6 639 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 FLT1P17948 1338 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 DOCK2Q92608 1830 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 SMIM23A6NLE4 172 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 AHCYL1O43865 530 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 FESP07332 822 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 ATP4AP20648 1035 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 MMP13P45452 471 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 SEMA3FQ13275 785 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 MKRN4PQ13434 485 aaPredicted RBP12.89□□□□□ -0.35
VTI1A-205ENST00000483122 CABP7Q86V35 215 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 GPKOWQ92917 476 aaPredicted RBP eCLIP12.89□□□□□ -0.35
VTI1A-205ENST00000483122 C7orf25Q9BPX7 421 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 OSBPL1AQ9BXW6 950 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 ADAMTS1Q9UHI8 967 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 PNPLA7Q6ZV29 1317 aa12.89□□□□□ -0.35
VTI1A-205ENST00000483122 TLDC2A0PJX2 215 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 KRIT1O00522 736 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 MAP3K13O43283 966 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 IFNAR2P48551 515 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 USP11P51784 963 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 IFI35P80217 286 aaPredicted RBP12.88□□□□□ -0.35
VTI1A-205ENST00000483122 SLC18A3Q16572 532 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 IFI16Q16666 785 aaKnown RBP12.88□□□□□ -0.35
VTI1A-205ENST00000483122 PFKFB3Q16875 520 aaPredicted RBP12.88□□□□□ -0.35
VTI1A-205ENST00000483122 FAM83BQ5T0W9 1011 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 METTL13Q8N6R0 699 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 PBKQ96KB5 322 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 TRIM51Q9BSJ1 452 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 EPB41L4BQ9H329 900 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 ADAM22Q9P0K1 906 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 TRIM33Q9UPN9 1127 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 ATP6V0A2Q9Y487 856 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 PGRMC1O00264 195 aaKnown RBP12.88□□□□□ -0.35
VTI1A-205ENST00000483122 CES2O00748 559 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 ZBTB48P10074 688 aaPredicted RBP12.88□□□□□ -0.35
VTI1A-205ENST00000483122 POLR2FP61218 127 aaKnown RBP12.88□□□□□ -0.35
VTI1A-205ENST00000483122 TAF11Q15544 211 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 TXNRD1Q16881 649 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 INF2Q27J81 1249 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 GALNTL6Q49A17 601 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 LSM14BQ9BX40 385 aaKnown RBP12.88□□□□□ -0.35
VTI1A-205ENST00000483122 TXLNGYQ9BZA5 131 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 AZI2Q9H6S1 392 aa12.88□□□□□ -0.35
VTI1A-205ENST00000483122 LUC7LQ9NQ29 371 aaKnown RBP12.88□□□□□ -0.35
VTI1A-205ENST00000483122 INTS9Q9NV88 658 aaKnown RBP12.88□□□□□ -0.35
VTI1A-205ENST00000483122 DPPA5A6NC42 116 aa12.87□□□□□ -0.35
VTI1A-205ENST00000483122 NMT2O60551 498 aa12.87□□□□□ -0.35
VTI1A-205ENST00000483122 PPFIA2O75334 1257 aa12.87□□□□□ -0.35
VTI1A-205ENST00000483122 ATP2A2P16615 1042 aaKnown RBP12.87□□□□□ -0.35
VTI1A-205ENST00000483122 CTCFP49711 727 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-205ENST00000483122 TRAF1Q13077 416 aa12.87□□□□□ -0.35
VTI1A-205ENST00000483122 RAPGEF1Q13905 1077 aa12.87□□□□□ -0.35
VTI1A-205ENST00000483122 GNPTABQ3T906 1256 aa12.87□□□□□ -0.35
VTI1A-205ENST00000483122 CNNM4Q6P4Q7 775 aa12.87□□□□□ -0.35
VTI1A-205ENST00000483122 SLC30A9Q6PML9 568 aa12.87□□□□□ -0.35
VTI1A-205ENST00000483122 ADGRA1Q86SQ6 560 aa12.87□□□□□ -0.35
VTI1A-205ENST00000483122 ZBTB38Q8NAP3 1195 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-205ENST00000483122 ATP8B4Q8TF62 1192 aa12.87□□□□□ -0.35
VTI1A-205ENST00000483122 KLHL29Q96CT2 875 aa12.87□□□□□ -0.35
VTI1A-205ENST00000483122 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.87□□□□□ -0.35
VTI1A-205ENST00000483122 CEP72Q9P209 647 aa12.87□□□□□ -0.35
VTI1A-205ENST00000483122 PNMA3Q9UL41 463 aa12.87□□□□□ -0.35
VTI1A-205ENST00000483122 GNAT1P11488 350 aa12.87□□□□□ -0.35
VTI1A-205ENST00000483122 NEFHP12036 1026 aa12.87□□□□□ -0.35
VTI1A-205ENST00000483122 EIF3BP55884 814 aaKnown RBP12.87□□□□□ -0.35
VTI1A-205ENST00000483122 UBAP2Q5T6F2 1119 aaKnown RBP12.87□□□□□ -0.35
VTI1A-205ENST00000483122 CWF19L1Q69YN2 538 aaKnown RBP12.87□□□□□ -0.35
VTI1A-205ENST00000483122 LRRC55Q6ZSA7 311 aa12.87□□□□□ -0.35
VTI1A-205ENST00000483122 HOOK3Q86VS8 718 aa12.87□□□□□ -0.35
VTI1A-205ENST00000483122 EDEM3Q9BZQ6 932 aa12.87□□□□□ -0.35
VTI1A-205ENST00000483122 IRAK4Q9NWZ3 460 aa12.87□□□□□ -0.35
VTI1A-205ENST00000483122 SPDYE5A6NIY4 337 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 SNX3O60493 162 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 DDAH1O94760 285 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 CALM1P0DP23 149 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 CALM2P0DP24 149 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 CALM3P0DP25 149 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 PPP1R2P41236 205 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms