RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 AGO3Q9H9G7 860 aaKnown RBP8.51□□□□□ -1.05
CSDE1-206ENST00000483030 RC3H2Q9HBD1 1191 aaKnown RBP8.51□□□□□ -1.05
CSDE1-206ENST00000483030 CD207Q9UJ71 328 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 PLAGL2Q9UPG8 496 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 RWDD3Q9Y3V2 267 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 FRMPD4Q14CM0 1322 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 ADGRA3Q8IWK6 1321 aa8.51□□□□□ -1.05
CSDE1-206ENST00000483030 GSTTP1A0A1W2PQM5 241 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 MEIS2O14770 477 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 CYP21A2P08686 494 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 IGBP1P78318 339 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 PTH1RQ03431 593 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 WTAPQ15007 396 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 GRIK4Q16099 956 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 FBXO47Q5MNV8 452 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 MARCH8Q5T0T0 291 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 XRRA1Q6P2D8 792 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 CATIPQ7Z7H3 387 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 RTN4RL1Q86UN2 441 aaPredicted RBP8.5□□□□□ -1.05
CSDE1-206ENST00000483030 GIMAP8Q8ND71 665 aaPredicted RBP8.5□□□□□ -1.05
CSDE1-206ENST00000483030 SPPL3Q8TCT6 385 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 EDAQ92838 391 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 GLG1Q92896 1179 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 ZBTB10Q96DT7 871 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 PLVAPQ9BX97 442 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 PKD2L1Q9P0L9 805 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 TUBE1Q9UJT0 475 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 CDY2AQ9Y6F7 541 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 MRPL42Q9Y6G3 142 aaKnown RBP8.5□□□□□ -1.05
CSDE1-206ENST00000483030 TAF6LQ9Y6J9 622 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 KIAA1217Q5T5P2 1943 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 SIP14410 1827 aa8.5□□□□□ -1.05
CSDE1-206ENST00000483030 MBLAC1A4D2B0 266 aaPredicted RBP8.49□□□□□ -1.05
CSDE1-206ENST00000483030 PIK3CDO00329 1044 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 MMP1P03956 469 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 ITGB1P05556 798 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 KCNA2P16389 499 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 ITGB5P18084 799 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 DNAJB1P25685 340 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 CD52P31358 61 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 NDUFV1P49821 464 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 MRPS6P82932 125 aaKnown RBP8.49□□□□□ -1.05
CSDE1-206ENST00000483030 AAMPQ13685 434 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 SART3Q15020 963 aaKnown RBP8.49□□□□□ -1.05
CSDE1-206ENST00000483030 PAN2Q504Q3 1202 aaKnown RBP8.49□□□□□ -1.05
CSDE1-206ENST00000483030 TSHZ1Q6ZSZ6 1077 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 ADGRD2Q7Z7M1 963 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 RALYLQ86SE5 291 aaKnown RBP8.49□□□□□ -1.05
CSDE1-206ENST00000483030 KLHL23Q8NBE8 558 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 NCOA7Q8NI08 942 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 IGDCC4Q8TDY8 1250 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 LINC01599Q8WXQ3 324 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 PPP2R3CQ969Q6 453 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 GPRASP2Q96D09 838 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 RRP36Q96EU6 259 aaKnown RBP8.49□□□□□ -1.05
CSDE1-206ENST00000483030 MSLNLQ96KJ4 702 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 MYL10Q9BUA6 226 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 FAM49AQ9H0Q0 323 aaPredicted RBP8.49□□□□□ -1.05
CSDE1-206ENST00000483030 SMARCAD1Q9H4L7 1026 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 ERAP1Q9NZ08 941 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 CLEC1BQ9P126 229 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 MYO7AQ13402 2215 aa8.49□□□□□ -1.05
CSDE1-206ENST00000483030 TMEM221A6NGB7 291 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 E7EWF7 191 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 M0R296 226 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 PPFIA3O75145 1194 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 EYA4O95677 639 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 INSRRP14616 1297 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 IBSPP21815 317 aaPredicted RBP8.48□□□□□ -1.05
CSDE1-206ENST00000483030 NRIP1P48552 1158 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 GATMP50440 423 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 TMEM62Q0P6H9 643 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 NAALADL2Q58DX5 795 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 IER5LQ5T953 404 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 IER5Q5VY09 327 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 TRIM67Q6ZTA4 783 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 BMP8AQ7Z5Y6 402 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 RBM23Q86U06 439 aaKnown RBP8.48□□□□□ -1.05
CSDE1-206ENST00000483030 NPAS4Q8IUM7 802 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 CMTR2Q8IYT2 770 aaKnown RBP8.48□□□□□ -1.05
CSDE1-206ENST00000483030 CRIPAKQ8N1N5 446 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 EFHBQ8N7U6 833 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 MICAL1Q8TDZ2 1067 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 P2RX5Q93086 422 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 PBXIP1Q96AQ6 731 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 CDHR1Q96JP9 859 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 PHOX2BQ99453 314 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 SPZ1Q9BXG8 430 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 PSTPIP2Q9H939 334 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 SEC63Q9UGP8 760 aaKnown RBP8.48□□□□□ -1.05
CSDE1-206ENST00000483030 PADI3Q9ULW8 664 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 UBIAD1Q9Y5Z9 338 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 MYH7BA7E2Y1 1941 aa8.48□□□□□ -1.05
CSDE1-206ENST00000483030 MICAL3Q7RTP6 2002 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 COL4A6Q14031 1691 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 POTEMA6NI47 508 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 RRN3P2A6NIE6 340 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 M0QZ92 97 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 STAG3L1P0CL83 205 aa8.47□□□□□ -1.05
CSDE1-206ENST00000483030 SCG2P13521 617 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms