RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 MIS18BP1Q6P0N0 1132 aa15.75■□□□□ 0.11
VARS-225ENST00000482996 TRAF7Q6Q0C0 670 aa15.75■□□□□ 0.11
VARS-225ENST00000482996 RSPH3Q86UC2 560 aa15.75■□□□□ 0.11
VARS-225ENST00000482996 PHOSPHO2Q8TCD6 241 aa15.75■□□□□ 0.11
VARS-225ENST00000482996 AIFM3Q96NN9 605 aa15.75■□□□□ 0.11
VARS-225ENST00000482996 PCYT2Q99447 389 aa15.75■□□□□ 0.11
VARS-225ENST00000482996 CDX2Q99626 313 aaPredicted RBP15.75■□□□□ 0.11
VARS-225ENST00000482996 ZNF576Q9H609 170 aa15.75■□□□□ 0.11
VARS-225ENST00000482996 ORC3Q9UBD5 711 aaPredicted RBP15.75■□□□□ 0.11
VARS-225ENST00000482996 TUBE1Q9UJT0 475 aa15.75■□□□□ 0.11
VARS-225ENST00000482996 PCDHA11Q9Y5I1 949 aa15.75■□□□□ 0.11
VARS-225ENST00000482996 ABHD14A-ACY1A0A1B0GW23 586 aa15.74■□□□□ 0.11
VARS-225ENST00000482996 KIF28PB7ZC32 967 aa15.74■□□□□ 0.11
VARS-225ENST00000482996 DHX15O43143 795 aaKnown RBP15.74■□□□□ 0.11
VARS-225ENST00000482996 ATG7O95352 703 aa15.74■□□□□ 0.11
VARS-225ENST00000482996 CCNE2O96020 404 aa15.74■□□□□ 0.11
VARS-225ENST00000482996 CTSHP09668 335 aa15.74■□□□□ 0.11
VARS-225ENST00000482996 KRT76Q01546 638 aa15.74■□□□□ 0.11
VARS-225ENST00000482996 ZNF746Q6NUN9 644 aaPredicted RBP15.74■□□□□ 0.11
VARS-225ENST00000482996 KRT25Q7Z3Z0 450 aa15.74■□□□□ 0.11
VARS-225ENST00000482996 TBCKQ8TEA7 893 aa15.74■□□□□ 0.11
VARS-225ENST00000482996 GTF3C6Q969F1 213 aa15.74■□□□□ 0.11
VARS-225ENST00000482996 NKX2-4Q9H2Z4 354 aa15.74■□□□□ 0.11
VARS-225ENST00000482996 SLC28A3Q9HAS3 691 aa15.74■□□□□ 0.11
VARS-225ENST00000482996 MYO9BQ13459 2157 aa15.73■□□□□ 0.11
VARS-225ENST00000482996 RPLP2P05387 115 aaKnown RBP15.73■□□□□ 0.11
VARS-225ENST00000482996 INSRRP14616 1297 aa15.73■□□□□ 0.11
VARS-225ENST00000482996 RABGGTBP53611 331 aa15.73■□□□□ 0.11
VARS-225ENST00000482996 IGBP1P78318 339 aa15.73■□□□□ 0.11
VARS-225ENST00000482996 IKBKEQ14164 716 aa15.73■□□□□ 0.11
VARS-225ENST00000482996 MBTPS1Q14703 1052 aa15.73■□□□□ 0.11
VARS-225ENST00000482996 PLCB4Q15147 1175 aa15.73■□□□□ 0.11
VARS-225ENST00000482996 NONOQ15233 471 aaKnown RBP eCLIP15.73■□□□□ 0.11
VARS-225ENST00000482996 ME3Q16798 604 aa15.73■□□□□ 0.11
VARS-225ENST00000482996 ABHD15Q6UXT9 468 aa15.73■□□□□ 0.11
VARS-225ENST00000482996 RPAINQ86UA6 219 aa15.73■□□□□ 0.11
VARS-225ENST00000482996 SMAP1Q8IYB5 467 aaPredicted RBP15.73■□□□□ 0.11
VARS-225ENST00000482996 NECAB1Q8N987 351 aa15.73■□□□□ 0.11
VARS-225ENST00000482996 UIMC1Q96RL1 719 aa15.73■□□□□ 0.11
VARS-225ENST00000482996 ZNF302Q9NR11 478 aa15.73■□□□□ 0.11
VARS-225ENST00000482996 KCNJ14Q9UNX9 436 aa15.73■□□□□ 0.11
VARS-225ENST00000482996 YBX2Q9Y2T7 364 aaKnown RBP15.73■□□□□ 0.11
VARS-225ENST00000482996 IGKV6D-21A0A0A0MT36 114 aa15.72■□□□□ 0.11
VARS-225ENST00000482996 CCDC194A0A1B0GVG4 234 aa15.72■□□□□ 0.11
VARS-225ENST00000482996 POTEB3A0JP26 581 aa15.72■□□□□ 0.11
VARS-225ENST00000482996 MBLAC1A4D2B0 266 aaPredicted RBP15.72■□□□□ 0.11
VARS-225ENST00000482996 M0R2N6 131 aa15.72■□□□□ 0.11
VARS-225ENST00000482996 CTDNEP1O95476 244 aa15.72■□□□□ 0.11
VARS-225ENST00000482996 WDR5P61964 334 aaKnown RBP15.72■□□□□ 0.11
VARS-225ENST00000482996 C8orf34Q49A92 452 aa15.72■□□□□ 0.11
VARS-225ENST00000482996 PDXDC2PQ6P474 469 aa15.72■□□□□ 0.11
VARS-225ENST00000482996 POTEBQ6S5H4 581 aa15.72■□□□□ 0.11
VARS-225ENST00000482996 RUFY4Q6ZNE9 571 aa15.72■□□□□ 0.11
VARS-225ENST00000482996 HERC6Q8IVU3 1022 aa15.72■□□□□ 0.11
VARS-225ENST00000482996 MYLIPQ8WY64 445 aa15.72■□□□□ 0.11
VARS-225ENST00000482996 SEPT8Q92599 483 aa15.72■□□□□ 0.11
VARS-225ENST00000482996 LENG9Q96B70 501 aa15.72■□□□□ 0.11
VARS-225ENST00000482996 PHF20Q9BVI0 1012 aa15.72■□□□□ 0.11
VARS-225ENST00000482996 COL6A3P12111 3177 aa15.72■□□□□ 0.11
VARS-225ENST00000482996 CHD9Q3L8U1 2897 aa15.72■□□□□ 0.11
VARS-225ENST00000482996 MSH4O15457 936 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 HBP1O60381 514 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 GAS7O60861 476 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 LARGE1O95461 756 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 PSAPP07602 524 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 FOSL2P15408 326 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 GRIN2CQ14957 1233 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 NPY5RQ15761 445 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 Q4G0T1 1027 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 PLEKHG4Q58EX7 1191 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 FAM26DQ5JW98 314 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 MARCH8Q5T0T0 291 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 PPP2R2DQ66LE6 453 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 SWSAP1Q6NVH7 229 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 MOXD1Q6UVY6 613 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 CCDC60Q8IWA6 550 aaPredicted RBP15.71■□□□□ 0.11
VARS-225ENST00000482996 CKAP2LQ8IYA6 745 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 DBF4BQ8NFT6 615 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 ATP8B4Q8TF62 1192 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 RIT2Q99578 217 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 BRMS1Q9HCU9 246 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 SAMM50Q9Y512 469 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 PCDHA10Q9Y5I2 948 aa15.71■□□□□ 0.11
VARS-225ENST00000482996 CYP3A7-CYP3A51PA0A087WV96 503 aa15.7■□□□□ 0.1
VARS-225ENST00000482996 WDR64B1ANS9 1081 aa15.7■□□□□ 0.1
VARS-225ENST00000482996 EDIL3O43854 480 aa15.7■□□□□ 0.1
VARS-225ENST00000482996 CYP3A7P24462 503 aa15.7■□□□□ 0.1
VARS-225ENST00000482996 INF2Q27J81 1249 aa15.7■□□□□ 0.1
VARS-225ENST00000482996 LRCH2Q5VUJ6 765 aa15.7■□□□□ 0.1
VARS-225ENST00000482996 DNAJB3Q8WWF6 145 aa15.7■□□□□ 0.1
VARS-225ENST00000482996 SLC5A5Q92911 643 aa15.7■□□□□ 0.1
VARS-225ENST00000482996 GAS2L1Q99501 681 aaPredicted RBP15.7■□□□□ 0.1
VARS-225ENST00000482996 ZBED2Q9BTP6 218 aa15.7■□□□□ 0.1
VARS-225ENST00000482996 TEKT3Q9BXF9 490 aa15.7■□□□□ 0.1
VARS-225ENST00000482996 FAM49AQ9H0Q0 323 aaPredicted RBP15.7■□□□□ 0.1
VARS-225ENST00000482996 LIMCH1Q9UPQ0 1083 aa15.7■□□□□ 0.1
VARS-225ENST00000482996 M0QZ92 97 aa15.69■□□□□ 0.1
VARS-225ENST00000482996 TLL1O43897 1013 aa15.69■□□□□ 0.1
VARS-225ENST00000482996 DTNBO60941 627 aa15.69■□□□□ 0.1
VARS-225ENST00000482996 TDP2O95551 362 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms