RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 BUB1O43683 1085 aa16.74■□□□□ 0.27
DDR1-244ENST00000482873 USP8P40818 1118 aa16.74■□□□□ 0.27
DDR1-244ENST00000482873 MRPL12P52815 198 aaKnown RBP16.74■□□□□ 0.27
DDR1-244ENST00000482873 PSMC6P62333 389 aa16.74■□□□□ 0.27
DDR1-244ENST00000482873 JAG1P78504 1218 aa16.74■□□□□ 0.27
DDR1-244ENST00000482873 CYP4A11Q02928 519 aa16.74■□□□□ 0.27
DDR1-244ENST00000482873 TUBB8Q3ZCM7 444 aa16.74■□□□□ 0.27
DDR1-244ENST00000482873 HERC4Q5GLZ8 1057 aaPredicted RBP16.74■□□□□ 0.27
DDR1-244ENST00000482873 NAA35Q5VZE5 725 aa16.74■□□□□ 0.27
DDR1-244ENST00000482873 MTMR8Q96EF0 704 aa16.74■□□□□ 0.27
DDR1-244ENST00000482873 RAB34Q9BZG1 259 aa16.74■□□□□ 0.27
DDR1-244ENST00000482873 MAGEF1Q9HAY2 307 aa16.74■□□□□ 0.27
DDR1-244ENST00000482873 KIAA0754O94854 1291 aa16.74■□□□□ 0.27
DDR1-244ENST00000482873 LCA5LO95447 670 aa16.74■□□□□ 0.27
DDR1-244ENST00000482873 KRT18P05783 430 aaKnown RBP16.74■□□□□ 0.27
DDR1-244ENST00000482873 CDC37Q16543 378 aaPredicted RBP16.74■□□□□ 0.27
DDR1-244ENST00000482873 CERKLQ49MI3 558 aaPredicted RBP16.74■□□□□ 0.27
DDR1-244ENST00000482873 CCDC40Q4G0X9 1142 aa16.74■□□□□ 0.27
DDR1-244ENST00000482873 SLFN13Q68D06 897 aa16.74■□□□□ 0.27
DDR1-244ENST00000482873 SH3BP5LQ7L8J4 393 aa16.74■□□□□ 0.27
DDR1-244ENST00000482873 ATXN2Q99700 1313 aaKnown RBP16.74■□□□□ 0.27
DDR1-244ENST00000482873 FSBPO95073 299 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 SEC24CP53992 1094 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 NAP1L1P55209 391 aaKnown RBP16.73■□□□□ 0.27
DDR1-244ENST00000482873 PTPROQ16827 1216 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 TDRD12Q587J7 1177 aaKnown RBP16.73■□□□□ 0.27
DDR1-244ENST00000482873 KLHDC7AQ5VTJ3 777 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 KDM7AQ6ZMT4 941 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 CACNA2D4Q7Z3S7 1137 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 IFT81Q8WYA0 676 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 PIK3R5Q8WYR1 880 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 DNAJC19Q96DA6 116 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 CABS1Q96KC9 395 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 EPN3Q9H201 632 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 TDRD3Q9H7E2 651 aaKnown RBP16.73■□□□□ 0.27
DDR1-244ENST00000482873 DONSONQ9NYP3 566 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.73■□□□□ 0.27
DDR1-244ENST00000482873 SIK3Q9Y2K2 1263 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 TULP1O00294 542 aaPredicted RBP16.73■□□□□ 0.27
DDR1-244ENST00000482873 MED24O75448 989 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 SMARCA1P28370 1054 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 MAP2K2P36507 400 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 MAGEA1P43355 309 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 PABPC4Q13310 644 aaKnown RBP eCLIP16.73■□□□□ 0.27
DDR1-244ENST00000482873 SF3B2Q13435 895 aaKnown RBP16.73■□□□□ 0.27
DDR1-244ENST00000482873 CFAP58Q5T655 872 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 LRRC55Q6ZSA7 311 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 GPBP1Q86WP2 473 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 IKZF4Q9H2S9 585 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 EPB41L5Q9HCM4 733 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 GDF3Q9NR23 364 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 STK17AQ9UEE5 414 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 CHRNA5P30532 468 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 CLK2P49760 499 aaKnown RBP16.73■□□□□ 0.27
DDR1-244ENST00000482873 UBXN2AP68543 259 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 RASSF7Q02833 373 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 GUCY2DQ02846 1103 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 FAM26FQ5R3K3 315 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 KRT27Q7Z3Y8 459 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 MYOCDQ8IZQ8 938 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 CXorf56Q9H5V9 222 aa16.73■□□□□ 0.27
DDR1-244ENST00000482873 SCAF8Q9UPN6 1271 aaKnown RBP16.73■□□□□ 0.27
DDR1-244ENST00000482873 SFI1A8K8P3 1242 aa16.72■□□□□ 0.27
DDR1-244ENST00000482873 HEXIM1O94992 359 aaKnown RBP16.72■□□□□ 0.27
DDR1-244ENST00000482873 PLA2G4BP0C869 781 aa16.72■□□□□ 0.27
DDR1-244ENST00000482873 GUCY2FP51841 1108 aa16.72■□□□□ 0.27
DDR1-244ENST00000482873 CASP5P51878 434 aa16.72■□□□□ 0.27
DDR1-244ENST00000482873 PDIA5Q14554 519 aa16.72■□□□□ 0.27
DDR1-244ENST00000482873 TRADDQ15628 312 aa16.72■□□□□ 0.27
DDR1-244ENST00000482873 SIAH1Q8IUQ4 282 aa16.72■□□□□ 0.27
DDR1-244ENST00000482873 IFT20Q8IY31 132 aa16.72■□□□□ 0.27
DDR1-244ENST00000482873 GUF1Q8N442 669 aaKnown RBP16.72■□□□□ 0.27
DDR1-244ENST00000482873 JPH2Q9BR39 696 aaPredicted RBP16.72■□□□□ 0.27
DDR1-244ENST00000482873 FAM198AQ9UFP1 575 aa16.72■□□□□ 0.27
DDR1-244ENST00000482873 NR1D1P20393 614 aa16.72■□□□□ 0.27
DDR1-244ENST00000482873 KCNMA1Q12791 1236 aa16.72■□□□□ 0.27
DDR1-244ENST00000482873 MAN2A1Q16706 1144 aa16.72■□□□□ 0.27
DDR1-244ENST00000482873 TMEM119Q4V9L6 283 aa16.72■□□□□ 0.27
DDR1-244ENST00000482873 ZNF473Q8WTR7 871 aaKnown RBP16.72■□□□□ 0.27
DDR1-244ENST00000482873 ANO3Q9BYT9 981 aa16.72■□□□□ 0.27
DDR1-244ENST00000482873 PVALEFA0A1B0GWK0 134 aa16.71■□□□□ 0.27
DDR1-244ENST00000482873 PPP1R37O75864 691 aa16.71■□□□□ 0.27
DDR1-244ENST00000482873 CFAP221Q4G0U5 840 aa16.71■□□□□ 0.27
DDR1-244ENST00000482873 GLE1Q53GS7 698 aaKnown RBP16.71■□□□□ 0.27
DDR1-244ENST00000482873 TMX4Q9H1E5 349 aaPredicted RBP16.71■□□□□ 0.27
DDR1-244ENST00000482873 LY75O60449 1722 aa16.71■□□□□ 0.27
DDR1-244ENST00000482873 PJA2O43164 708 aa16.71■□□□□ 0.26
DDR1-244ENST00000482873 NT5C2P49902 561 aa16.71■□□□□ 0.26
DDR1-244ENST00000482873 RNASE9P60153 205 aaKnown RBP16.71■□□□□ 0.26
DDR1-244ENST00000482873 POLR2FP61218 127 aaKnown RBP16.71■□□□□ 0.26
DDR1-244ENST00000482873 ICA1Q05084 483 aa16.71■□□□□ 0.26
DDR1-244ENST00000482873 ZYXQ15942 572 aaKnown RBP16.71■□□□□ 0.26
DDR1-244ENST00000482873 PTGISQ16647 500 aa16.71■□□□□ 0.26
DDR1-244ENST00000482873 NBPF20Q3BBV1 942 aa16.71■□□□□ 0.26
DDR1-244ENST00000482873 GPATCH4Q5T3I0 446 aaKnown RBP16.71■□□□□ 0.26
DDR1-244ENST00000482873 PPP4R3AQ6IN85 833 aa16.71■□□□□ 0.26
DDR1-244ENST00000482873 SWAP70Q9UH65 585 aa16.71■□□□□ 0.26
DDR1-244ENST00000482873 KLRG2A4D1S0 409 aaPredicted RBP16.7■□□□□ 0.26
DDR1-244ENST00000482873 F5H6K3 240 aa16.7■□□□□ 0.26
DDR1-244ENST00000482873 HDLBPQ00341 1268 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 211.6 ms