RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 FLT1P17948 1338 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 BHMG1C9JSJ3 638 aaPredicted RBP12.06□□□□□ -0.48
RPGR-208ENST00000482855 CCDC188H7C350 402 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 LAD1O00515 517 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 TLR2O60603 784 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 PACSIN1Q9BY11 444 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 CORO1CQ9ULV4 474 aaPredicted RBP12.06□□□□□ -0.48
RPGR-208ENST00000482855 BAZ2AQ9UIF9 1905 aaKnown RBP12.06□□□□□ -0.48
RPGR-208ENST00000482855 MROH5Q6ZUA9 1318 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 ENO4A6NNW6 628 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 KRIT1O00522 736 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 ALADP13716 330 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 NQO1P15559 274 aaKnown RBP12.06□□□□□ -0.48
RPGR-208ENST00000482855 CYP7A1P22680 504 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 CCND1P24385 295 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 USP11P51784 963 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 FAM83BQ5T0W9 1011 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 CCDC26Q8TAB7 109 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 AK8Q96MA6 479 aa12.06□□□□□ -0.48
RPGR-208ENST00000482855 NOC2LQ9Y3T9 749 aaKnown RBP12.06□□□□□ -0.48
RPGR-208ENST00000482855 KCPQ6ZWJ8 1503 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 CCDC88AQ3V6T2 1871 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 A0A087X0T9 212 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 GOLGA6L10A0A0M3HER8 536 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 CAND2O75155 1236 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 FAM228BP0C875 321 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 CDC25CP30307 473 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 PRPHP41219 470 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 KCNMA1Q12791 1236 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 TXNRD1Q16881 649 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 INF2Q27J81 1249 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 LRRC34Q8IZ02 419 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 GPKOWQ92917 476 aaPredicted RBP eCLIP12.05□□□□□ -0.48
RPGR-208ENST00000482855 ELAC2Q9BQ52 826 aaKnown RBP12.05□□□□□ -0.48
RPGR-208ENST00000482855 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.05□□□□□ -0.48
RPGR-208ENST00000482855 NSRP1Q9H0G5 558 aaKnown RBP12.05□□□□□ -0.48
RPGR-208ENST00000482855 FAM114A2Q9NRY5 505 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 AMACRQ9UHK6 382 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 CYP2D7A0A087X1C5 515 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 LIN7AO14910 233 aaPredicted RBP12.05□□□□□ -0.48
RPGR-208ENST00000482855 ARID5AQ03989 594 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 LRRC63Q05C16 580 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 RAPGEF1Q13905 1077 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 RBBP5Q15291 538 aaKnown RBP12.05□□□□□ -0.48
RPGR-208ENST00000482855 PARD3BQ8TEW8 1205 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 SLITRK6Q9H5Y7 841 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 LRRC4CQ9HCJ2 640 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 ETAA1Q9NY74 926 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 ADAMTS1Q9UHI8 967 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 ATP8A1Q9Y2Q0 1164 aa12.05□□□□□ -0.48
RPGR-208ENST00000482855 MAGEB6P1A0A0J9YX57 407 aa12.04□□□□□ -0.48
RPGR-208ENST00000482855 IRS4O14654 1257 aaPredicted RBP12.04□□□□□ -0.48
RPGR-208ENST00000482855 VIMP08670 466 aaKnown RBP12.04□□□□□ -0.48
RPGR-208ENST00000482855 ALDH5A1P51649 535 aaPredicted RBP12.04□□□□□ -0.48
RPGR-208ENST00000482855 POLR2FP61218 127 aaKnown RBP12.04□□□□□ -0.48
RPGR-208ENST00000482855 KCNJ2P63252 427 aa12.04□□□□□ -0.48
RPGR-208ENST00000482855 ENOX2Q16206 610 aaKnown RBP12.04□□□□□ -0.48
RPGR-208ENST00000482855 IFI16Q16666 785 aaKnown RBP12.04□□□□□ -0.48
RPGR-208ENST00000482855 SLC27A3Q5K4L6 730 aa12.04□□□□□ -0.48
RPGR-208ENST00000482855 SPDYE1Q8NFV5 336 aaPredicted RBP12.04□□□□□ -0.48
RPGR-208ENST00000482855 ZCRB1Q8TBF4 217 aaKnown RBP12.04□□□□□ -0.48
RPGR-208ENST00000482855 ATXN2LQ8WWM7 1075 aaKnown RBP12.04□□□□□ -0.48
RPGR-208ENST00000482855 CNKSR1Q969H4 720 aa12.04□□□□□ -0.48
RPGR-208ENST00000482855 ZBTB10Q96DT7 871 aa12.04□□□□□ -0.48
RPGR-208ENST00000482855 LSM14BQ9BX40 385 aaKnown RBP12.04□□□□□ -0.48
RPGR-208ENST00000482855 DPH5Q9H2P9 285 aa12.04□□□□□ -0.48
RPGR-208ENST00000482855 KCNMB3Q9NPA1 279 aa12.04□□□□□ -0.48
RPGR-208ENST00000482855 SH3GLB2Q9NR46 395 aa12.04□□□□□ -0.48
RPGR-208ENST00000482855 SLC5A4Q9NY91 659 aa12.04□□□□□ -0.48
RPGR-208ENST00000482855 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.04□□□□□ -0.482e-6■■■■■ 55.4
RPGR-208ENST00000482855 AGAP1Q9UPQ3 857 aa12.04□□□□□ -0.48
RPGR-208ENST00000482855 UTP11Q9Y3A2 253 aaKnown RBP12.04□□□□□ -0.48
RPGR-208ENST00000482855 ANKRD33BA6NCL7 494 aa12.04□□□□□ -0.48
RPGR-208ENST00000482855 TTI1O43156 1089 aa12.04□□□□□ -0.48
RPGR-208ENST00000482855 LUC7L3O95232 432 aaKnown RBP12.04□□□□□ -0.48
RPGR-208ENST00000482855 RWDD2BP57060 319 aa12.04□□□□□ -0.48
RPGR-208ENST00000482855 KLHL30Q0D2K2 578 aa12.04□□□□□ -0.48
RPGR-208ENST00000482855 SPDYCQ5MJ68 293 aa12.04□□□□□ -0.48
RPGR-208ENST00000482855 GIGYF2Q6Y7W6 1299 aaKnown RBP12.04□□□□□ -0.48
RPGR-208ENST00000482855 DZIP3Q86Y13 1208 aaKnown RBP12.04□□□□□ -0.48
RPGR-208ENST00000482855 GUF1Q8N442 669 aaKnown RBP12.04□□□□□ -0.48
RPGR-208ENST00000482855 FMO2Q99518 471 aa12.04□□□□□ -0.48
RPGR-208ENST00000482855 TSG101Q99816 390 aa12.04□□□□□ -0.48
RPGR-208ENST00000482855 YIPF3Q9GZM5 350 aa12.04□□□□□ -0.48
RPGR-208ENST00000482855 ABCF3Q9NUQ8 709 aa12.04□□□□□ -0.48
RPGR-208ENST00000482855 SNAP23O00161 211 aa12.03□□□□□ -0.48
RPGR-208ENST00000482855 KIF5BP33176 963 aa12.03□□□□□ -0.48
RPGR-208ENST00000482855 MMP13P45452 471 aa12.03□□□□□ -0.48
RPGR-208ENST00000482855 BLMHQ13867 455 aa12.03□□□□□ -0.48
RPGR-208ENST00000482855 LRRC55Q6ZSA7 311 aa12.03□□□□□ -0.48
RPGR-208ENST00000482855 GOLPH3Q9H4A6 298 aa12.03□□□□□ -0.48
RPGR-208ENST00000482855 INTS9Q9NV88 658 aaKnown RBP12.03□□□□□ -0.48
RPGR-208ENST00000482855 BTNL10A8MVZ5 291 aa12.03□□□□□ -0.48
RPGR-208ENST00000482855 PPFIA2O75334 1257 aa12.03□□□□□ -0.48
RPGR-208ENST00000482855 NOL4O94818 638 aa12.03□□□□□ -0.48
RPGR-208ENST00000482855 UBOX5O94941 541 aa12.03□□□□□ -0.48
RPGR-208ENST00000482855 SNUPNO95149 360 aaKnown RBP12.03□□□□□ -0.48
RPGR-208ENST00000482855 PCP11498 1178 aaKnown RBP12.03□□□□□ -0.48
RPGR-208ENST00000482855 NCALDP61601 193 aa12.03□□□□□ -0.48
RPGR-208ENST00000482855 ASIC2Q16515 512 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms