RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 CIITAP33076 1130 aa17.44■□□□□ 0.38
EXOSC3-205ENST00000482614 SLC26A2P50443 739 aa17.44■□□□□ 0.38
EXOSC3-205ENST00000482614 ANKRD1Q15327 319 aa17.44■□□□□ 0.38
EXOSC3-205ENST00000482614 TCTN1Q2MV58 587 aa17.44■□□□□ 0.38
EXOSC3-205ENST00000482614 PLEKHG4Q58EX7 1191 aa17.44■□□□□ 0.38
EXOSC3-205ENST00000482614 RSPH3Q86UC2 560 aa17.44■□□□□ 0.38
EXOSC3-205ENST00000482614 FAM177A1Q8N128 213 aaPredicted RBP17.44■□□□□ 0.38
EXOSC3-205ENST00000482614 DBF4BQ8NFT6 615 aa17.44■□□□□ 0.38
EXOSC3-205ENST00000482614 SEPT8Q92599 483 aa17.44■□□□□ 0.38
EXOSC3-205ENST00000482614 ZNF577Q9BSK1 485 aa17.44■□□□□ 0.38
EXOSC3-205ENST00000482614 C22orf23Q9BZE7 217 aa17.44■□□□□ 0.38
EXOSC3-205ENST00000482614 SLKQ9H2G2 1235 aaPredicted RBP17.44■□□□□ 0.38
EXOSC3-205ENST00000482614 TBC1D22BQ9NU19 505 aa17.44■□□□□ 0.38
EXOSC3-205ENST00000482614 TUBE1Q9UJT0 475 aa17.44■□□□□ 0.38
EXOSC3-205ENST00000482614 PCDHA4Q9UN74 947 aa17.44■□□□□ 0.38
EXOSC3-205ENST00000482614 PTPRSQ13332 1948 aa17.44■□□□□ 0.38
EXOSC3-205ENST00000482614 MYO9BQ13459 2157 aa17.43■□□□□ 0.38
EXOSC3-205ENST00000482614 IGKV6D-21A0A0A0MT36 114 aa17.43■□□□□ 0.38
EXOSC3-205ENST00000482614 MBLAC1A4D2B0 266 aaPredicted RBP17.43■□□□□ 0.38
EXOSC3-205ENST00000482614 DDX39AO00148 427 aaKnown RBP17.43■□□□□ 0.38
EXOSC3-205ENST00000482614 DHX15O43143 795 aaKnown RBP17.43■□□□□ 0.38
EXOSC3-205ENST00000482614 TLL1O43897 1013 aa17.43■□□□□ 0.38
EXOSC3-205ENST00000482614 CDKL5O76039 1030 aa17.43■□□□□ 0.38
EXOSC3-205ENST00000482614 RPLP2P05387 115 aaKnown RBP17.43■□□□□ 0.38
EXOSC3-205ENST00000482614 CA3P07451 260 aa17.43■□□□□ 0.38
EXOSC3-205ENST00000482614 INSRRP14616 1297 aa17.43■□□□□ 0.38
EXOSC3-205ENST00000482614 USP11P51784 963 aa17.43■□□□□ 0.38
EXOSC3-205ENST00000482614 IGBP1P78318 339 aa17.43■□□□□ 0.38
EXOSC3-205ENST00000482614 DEFB103AP81534 67 aa17.43■□□□□ 0.38
EXOSC3-205ENST00000482614 PLCB4Q15147 1175 aa17.43■□□□□ 0.38
EXOSC3-205ENST00000482614 FAM160B1Q5W0V3 765 aa17.43■□□□□ 0.38
EXOSC3-205ENST00000482614 ABHD15Q6UXT9 468 aa17.43■□□□□ 0.38
EXOSC3-205ENST00000482614 ZBED2Q9BTP6 218 aa17.43■□□□□ 0.38
EXOSC3-205ENST00000482614 TRPC6Q9Y210 931 aa17.43■□□□□ 0.38
EXOSC3-205ENST00000482614 CCNE2O96020 404 aa17.42■□□□□ 0.38
EXOSC3-205ENST00000482614 SCRN1Q12765 414 aa17.42■□□□□ 0.38
EXOSC3-205ENST00000482614 PRR16Q569H4 304 aa17.42■□□□□ 0.38
EXOSC3-205ENST00000482614 MARCH8Q5T0T0 291 aa17.42■□□□□ 0.38
EXOSC3-205ENST00000482614 GALNT17Q6IS24 598 aa17.42■□□□□ 0.38
EXOSC3-205ENST00000482614 MIS18BP1Q6P0N0 1132 aa17.42■□□□□ 0.38
EXOSC3-205ENST00000482614 RUFY4Q6ZNE9 571 aa17.42■□□□□ 0.38
EXOSC3-205ENST00000482614 IL17RAQ96F46 866 aa17.42■□□□□ 0.38
EXOSC3-205ENST00000482614 TCEAL9Q9UHQ7 104 aa17.42■□□□□ 0.38
EXOSC3-205ENST00000482614 MICAL3Q7RTP6 2002 aa17.42■□□□□ 0.38
EXOSC3-205ENST00000482614 CDH23Q9H251 3354 aa17.42■□□□□ 0.38
EXOSC3-205ENST00000482614 POTEB3A0JP26 581 aa17.41■□□□□ 0.38
EXOSC3-205ENST00000482614 BACH1O14867 736 aa17.41■□□□□ 0.38
EXOSC3-205ENST00000482614 PFKFB2O60825 505 aa17.41■□□□□ 0.38
EXOSC3-205ENST00000482614 GJB5O95377 273 aa17.41■□□□□ 0.38
EXOSC3-205ENST00000482614 AMHP03971 560 aa17.41■□□□□ 0.38
EXOSC3-205ENST00000482614 ZNF746Q6NUN9 644 aaPredicted RBP17.41■□□□□ 0.38
EXOSC3-205ENST00000482614 POTEBQ6S5H4 581 aa17.41■□□□□ 0.38
EXOSC3-205ENST00000482614 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.41■□□□□ 0.38
EXOSC3-205ENST00000482614 BLIDQ8IZY5 108 aa17.41■□□□□ 0.38
EXOSC3-205ENST00000482614 DAGLBQ8NCG7 672 aa17.41■□□□□ 0.38
EXOSC3-205ENST00000482614 DNAJB3Q8WWF6 145 aa17.41■□□□□ 0.38
EXOSC3-205ENST00000482614 APBB2Q92870 758 aa17.41■□□□□ 0.38
EXOSC3-205ENST00000482614 RAD9AQ99638 391 aa17.41■□□□□ 0.38
EXOSC3-205ENST00000482614 ZNF302Q9NR11 478 aa17.41■□□□□ 0.38
EXOSC3-205ENST00000482614 TPCN1Q9ULQ1 816 aa17.41■□□□□ 0.38
EXOSC3-205ENST00000482614 HBP1O60381 514 aa17.4■□□□□ 0.38
EXOSC3-205ENST00000482614 CHRNA1P02708 482 aa17.4■□□□□ 0.38
EXOSC3-205ENST00000482614 IGFBP4P22692 258 aa17.4■□□□□ 0.38
EXOSC3-205ENST00000482614 AK2P54819 239 aa17.4■□□□□ 0.38
EXOSC3-205ENST00000482614 KRT76Q01546 638 aa17.4■□□□□ 0.38
EXOSC3-205ENST00000482614 TAP1Q03518 808 aa17.4■□□□□ 0.38
EXOSC3-205ENST00000482614 PDXDC2PQ6P474 469 aa17.4■□□□□ 0.38
EXOSC3-205ENST00000482614 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.4■□□□□ 0.387e-8■■□□□ 12.7
EXOSC3-205ENST00000482614 SMAP1Q8IYB5 467 aaPredicted RBP17.4■□□□□ 0.38
EXOSC3-205ENST00000482614 TBCKQ8TEA7 893 aa17.4■□□□□ 0.38
EXOSC3-205ENST00000482614 UIMC1Q96RL1 719 aa17.4■□□□□ 0.38
EXOSC3-205ENST00000482614 STK36Q9NRP7 1315 aa17.4■□□□□ 0.38
EXOSC3-205ENST00000482614 MYH9P35579 1960 aaKnown RBP17.39■□□□□ 0.37
EXOSC3-205ENST00000482614 EDIL3O43854 480 aa17.39■□□□□ 0.37
EXOSC3-205ENST00000482614 XBP1P17861 261 aa17.39■□□□□ 0.37
EXOSC3-205ENST00000482614 MGAT3Q09327 533 aa17.39■□□□□ 0.37
EXOSC3-205ENST00000482614 MKRN4PQ13434 485 aaPredicted RBP17.39■□□□□ 0.37
EXOSC3-205ENST00000482614 ADGRE1Q14246 886 aa17.39■□□□□ 0.37
EXOSC3-205ENST00000482614 SWSAP1Q6NVH7 229 aa17.39■□□□□ 0.37
EXOSC3-205ENST00000482614 TMCO2Q7Z6W1 182 aaPredicted RBP17.39■□□□□ 0.37
EXOSC3-205ENST00000482614 CCDC60Q8IWA6 550 aaPredicted RBP17.39■□□□□ 0.37
EXOSC3-205ENST00000482614 ATP8B4Q8TF62 1192 aa17.39■□□□□ 0.37
EXOSC3-205ENST00000482614 LENG9Q96B70 501 aa17.39■□□□□ 0.37
EXOSC3-205ENST00000482614 AIFM3Q96NN9 605 aa17.39■□□□□ 0.37
EXOSC3-205ENST00000482614 IFIH1Q9BYX4 1025 aaKnown RBP17.39■□□□□ 0.37
EXOSC3-205ENST00000482614 OSBPL7Q9BZF2 842 aa17.39■□□□□ 0.37
EXOSC3-205ENST00000482614 PCDHA2Q9Y5H9 948 aa17.39■□□□□ 0.37
EXOSC3-205ENST00000482614 PCDHA10Q9Y5I2 948 aa17.39■□□□□ 0.37
EXOSC3-205ENST00000482614 SMIM35A0A1B0GVV1 85 aa17.38■□□□□ 0.37
EXOSC3-205ENST00000482614 M0R2N6 131 aa17.38■□□□□ 0.37
EXOSC3-205ENST00000482614 PSAPP07602 524 aa17.38■□□□□ 0.37
EXOSC3-205ENST00000482614 MRPS6P82932 125 aaKnown RBP17.38■□□□□ 0.37
EXOSC3-205ENST00000482614 ZNF484Q5JVG2 852 aa17.38■□□□□ 0.37
EXOSC3-205ENST00000482614 IER5Q5VY09 327 aa17.38■□□□□ 0.37
EXOSC3-205ENST00000482614 MYOCDQ8IZQ8 938 aa17.38■□□□□ 0.37
EXOSC3-205ENST00000482614 TRAPPC12Q8WVT3 735 aa17.38■□□□□ 0.37
EXOSC3-205ENST00000482614 FAM49AQ9H0Q0 323 aaPredicted RBP17.38■□□□□ 0.37
EXOSC3-205ENST00000482614 CERS4Q9HA82 394 aa17.38■□□□□ 0.37
EXOSC3-205ENST00000482614 INSL6Q9Y581 213 aa17.38■□□□□ 0.37
EXOSC3-205ENST00000482614 MAFBQ9Y5Q3 323 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms