RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.41□□□□□ -1.54
COPA-204ENST00000481522 ZBTB8AQ96BR9 441 aa5.41□□□□□ -1.54
COPA-204ENST00000481522 EXOC2Q96KP1 924 aa5.41□□□□□ -1.54
COPA-204ENST00000481522 NOX5Q96PH1 765 aa5.41□□□□□ -1.54
COPA-204ENST00000481522 SSBP3Q9BWW4 388 aaPredicted RBP5.41□□□□□ -1.54
COPA-204ENST00000481522 JAM3Q9BX67 310 aa5.41□□□□□ -1.54
COPA-204ENST00000481522 NUB1Q9Y5A7 615 aa5.41□□□□□ -1.54
COPA-204ENST00000481522 KIF21BO75037 1637 aa5.41□□□□□ -1.54
COPA-204ENST00000481522 FAM47E-STBD1D6RA91 191 aa5.4□□□□□ -1.54
COPA-204ENST00000481522 CYP4F22Q6NT55 531 aa5.4□□□□□ -1.54
COPA-204ENST00000481522 CD300LDQ6UXZ3 194 aa5.4□□□□□ -1.54
COPA-204ENST00000481522 NOP9Q86U38 636 aaKnown RBP5.4□□□□□ -1.54
COPA-204ENST00000481522 FAM126BQ8IXS8 530 aa5.4□□□□□ -1.54
COPA-204ENST00000481522 PIP4K2CQ8TBX8 421 aa5.4□□□□□ -1.54
COPA-204ENST00000481522 KCNJ15Q99712 375 aa5.4□□□□□ -1.54
COPA-204ENST00000481522 CDIP1Q9H305 208 aa5.4□□□□□ -1.54
COPA-204ENST00000481522 PCDH18Q9HCL0 1135 aa5.4□□□□□ -1.54
COPA-204ENST00000481522 SLC6A20Q9NP91 592 aa5.4□□□□□ -1.54
COPA-204ENST00000481522 NGRNQ9NPE2 291 aaKnown RBP5.4□□□□□ -1.54
COPA-204ENST00000481522 SFMBT1Q9UHJ3 866 aa5.4□□□□□ -1.54
COPA-204ENST00000481522 PTCH2Q9Y6C5 1203 aa5.4□□□□□ -1.54
COPA-204ENST00000481522 ZNF536O15090 1300 aa5.4□□□□□ -1.55
COPA-204ENST00000481522 PPRC1Q5VV67 1664 aaKnown RBP5.4□□□□□ -1.55
COPA-204ENST00000481522 ASXL2Q76L83 1435 aa5.4□□□□□ -1.55
COPA-204ENST00000481522 CCDC163A0A0D9SF12 145 aa5.39□□□□□ -1.55
COPA-204ENST00000481522 SMARCA5O60264 1052 aaPredicted RBP5.39□□□□□ -1.55
COPA-204ENST00000481522 C8BP07358 591 aa5.39□□□□□ -1.55
COPA-204ENST00000481522 C6orf222P0C671 652 aaPredicted RBP5.39□□□□□ -1.55
COPA-204ENST00000481522 NANOS3P60323 173 aaKnown RBP5.39□□□□□ -1.55
COPA-204ENST00000481522 NKX3-2P78367 333 aa5.39□□□□□ -1.55
COPA-204ENST00000481522 PURAQ00577 322 aaKnown RBP5.39□□□□□ -1.55
COPA-204ENST00000481522 PAK1Q13153 545 aa5.39□□□□□ -1.55
COPA-204ENST00000481522 RGL3Q3MIN7 710 aa5.39□□□□□ -1.55
COPA-204ENST00000481522 BORAQ6PGQ7 559 aa5.39□□□□□ -1.55
COPA-204ENST00000481522 OTOP3Q7RTS5 596 aa5.39□□□□□ -1.55
COPA-204ENST00000481522 FAM124AQ86V42 546 aa5.39□□□□□ -1.55
COPA-204ENST00000481522 TRIM48Q8IWZ4 208 aa5.39□□□□□ -1.55
COPA-204ENST00000481522 SH3TC2Q8TF17 1288 aa5.39□□□□□ -1.55
COPA-204ENST00000481522 CDK5RAP1Q96SZ6 601 aaKnown RBP5.39□□□□□ -1.55
COPA-204ENST00000481522 SMOC1Q9H4F8 434 aa5.39□□□□□ -1.55
COPA-204ENST00000481522 IPPKQ9H8X2 491 aa5.39□□□□□ -1.55
COPA-204ENST00000481522 DTLQ9NZJ0 730 aa5.39□□□□□ -1.55
COPA-204ENST00000481522 NDOR1Q9UHB4 597 aa5.39□□□□□ -1.55
COPA-204ENST00000481522 INVSQ9Y283 1065 aa5.39□□□□□ -1.55
COPA-204ENST00000481522 TCRBV5S2A0A599 114 aa5.38□□□□□ -1.55
COPA-204ENST00000481522 EFCAB14O75071 495 aa5.38□□□□□ -1.55
COPA-204ENST00000481522 TADA3O75528 432 aa5.38□□□□□ -1.55
COPA-204ENST00000481522 STAT5AP42229 794 aa5.38□□□□□ -1.55
COPA-204ENST00000481522 GUCY1A3Q02108 690 aa5.38□□□□□ -1.55
COPA-204ENST00000481522 ARRDC4Q8NCT1 418 aa5.38□□□□□ -1.55
COPA-204ENST00000481522 TOE1Q96GM8 510 aaKnown RBP5.38□□□□□ -1.55
COPA-204ENST00000481522 ASH2LQ9UBL3 628 aa5.38□□□□□ -1.55
COPA-204ENST00000481522 SLC27A2O14975 620 aa5.37□□□□□ -1.55
COPA-204ENST00000481522 TGFB2P61812 414 aa5.37□□□□□ -1.55
COPA-204ENST00000481522 ST5P78524 1137 aa5.37□□□□□ -1.55
COPA-204ENST00000481522 SMAD4Q13485 552 aaKnown RBP5.37□□□□□ -1.55
COPA-204ENST00000481522 CSRP2Q16527 193 aa5.37□□□□□ -1.55
COPA-204ENST00000481522 FAM47CQ5HY64 1035 aa5.37□□□□□ -1.55
COPA-204ENST00000481522 LIMS2Q7Z4I7 341 aa5.37□□□□□ -1.55
COPA-204ENST00000481522 ZC3H7AQ8IWR0 971 aaKnown RBP5.37□□□□□ -1.55
COPA-204ENST00000481522 FAM26EQ8N5C1 309 aa5.37□□□□□ -1.55
COPA-204ENST00000481522 LINC00482Q8N8I6 264 aa5.37□□□□□ -1.55
COPA-204ENST00000481522 UHMK1Q8TAS1 419 aaKnown RBP5.37□□□□□ -1.55
COPA-204ENST00000481522 PCDHA8Q9Y5H6 950 aa5.37□□□□□ -1.55
COPA-204ENST00000481522 NCAPD3P42695 1498 aa5.37□□□□□ -1.55
COPA-204ENST00000481522 MROH6A6NGR9 719 aa5.36□□□□□ -1.55
COPA-204ENST00000481522 GSTA4O15217 222 aa5.36□□□□□ -1.55
COPA-204ENST00000481522 COL6A2P12110 1019 aa5.36□□□□□ -1.55
COPA-204ENST00000481522 RPL13P26373 211 aaKnown RBP5.36□□□□□ -1.55
COPA-204ENST00000481522 SQSTM1Q13501 440 aa5.36□□□□□ -1.55
COPA-204ENST00000481522 FAM26FQ5R3K3 315 aa5.36□□□□□ -1.55
COPA-204ENST00000481522 EP400NLQ6ZTU2 488 aa5.36□□□□□ -1.55
COPA-204ENST00000481522 TTLL6Q8N841 843 aa5.36□□□□□ -1.55
COPA-204ENST00000481522 FBXW5Q969U6 566 aa5.36□□□□□ -1.55
COPA-204ENST00000481522 VOPP1Q96AW1 172 aa5.36□□□□□ -1.55
COPA-204ENST00000481522 RNPC3Q96LT9 517 aaKnown RBP5.36□□□□□ -1.55
COPA-204ENST00000481522 GORASP1Q9BQQ3 440 aa5.36□□□□□ -1.55
COPA-204ENST00000481522 KLC2Q9H0B6 622 aa5.36□□□□□ -1.55
COPA-204ENST00000481522 SLC52A2Q9HAB3 445 aa5.36□□□□□ -1.55
COPA-204ENST00000481522 CATSPERZQ9NTU4 200 aa5.36□□□□□ -1.55
COPA-204ENST00000481522 TMEM260Q9NX78 707 aa5.36□□□□□ -1.55
COPA-204ENST00000481522 DSEQ9UL01 958 aa5.36□□□□□ -1.55
COPA-204ENST00000481522 MRPL42Q9Y6G3 142 aaKnown RBP5.36□□□□□ -1.55
COPA-204ENST00000481522 TNS2Q63HR2 1409 aa5.35□□□□□ -1.55
COPA-204ENST00000481522 ARVCFO00192 962 aa5.35□□□□□ -1.55
COPA-204ENST00000481522 CRTAMO95727 393 aa5.35□□□□□ -1.55
COPA-204ENST00000481522 AMHP03971 560 aa5.35□□□□□ -1.55
COPA-204ENST00000481522 SRGAP2CP0DJJ0 459 aa5.35□□□□□ -1.55
COPA-204ENST00000481522 TUSC3Q13454 348 aa5.35□□□□□ -1.55
COPA-204ENST00000481522 TEPPQ6URK8 271 aa5.35□□□□□ -1.55
COPA-204ENST00000481522 KCTD1Q719H9 257 aa5.35□□□□□ -1.55
COPA-204ENST00000481522 BHLHA9Q7RTU4 235 aa5.35□□□□□ -1.55
COPA-204ENST00000481522 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.35□□□□□ -1.55
COPA-204ENST00000481522 JAZF1Q86VZ6 243 aa5.35□□□□□ -1.55
COPA-204ENST00000481522 HOMER1Q86YM7 354 aa5.35□□□□□ -1.55
COPA-204ENST00000481522 KYQ8NBH2 561 aa5.35□□□□□ -1.55
COPA-204ENST00000481522 TTLL11Q8NHH1 800 aa5.35□□□□□ -1.55
COPA-204ENST00000481522 C11orf84Q9BUA3 381 aaPredicted RBP5.35□□□□□ -1.55
COPA-204ENST00000481522 MRPL4Q9BYD3 311 aaKnown RBP5.35□□□□□ -1.55
COPA-204ENST00000481522 KANSL2Q9H9L4 492 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms