RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 TOMM22Q9NS69 142 aa7.06□□□□□ -1.28
UPF3A-207ENST00000481131 EID1Q9Y6B2 187 aa7.06□□□□□ -1.28
UPF3A-207ENST00000481131 SCRIBQ14160 1630 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 TNKSO95271 1327 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.05□□□□□ -1.28
UPF3A-207ENST00000481131 NUDT19A8MXV4 375 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 PAPLNO95428 1278 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 AFMP43652 599 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 PHC1P78364 1004 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 PRR5P85299 388 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 TMEM132BQ14DG7 1078 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 INAVAQ3KP66 663 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 ADGRF1Q5T601 910 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 BTBD8Q5XKL5 378 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 EP400NLQ6ZTU2 488 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 INTS4Q96HW7 963 aaKnown RBP7.05□□□□□ -1.28
UPF3A-207ENST00000481131 KIRREL1Q96J84 757 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 MENTQ9BUN1 341 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 BCAS3Q9H6U6 928 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 RIC8BQ9NVN3 520 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 CHPF2Q9P2E5 772 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 KLHL14Q9P2G3 628 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 NUDT5Q9UKK9 219 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 PLA2G2DQ9UNK4 145 aa7.05□□□□□ -1.28
UPF3A-207ENST00000481131 GJA4P35212 333 aa7.04□□□□□ -1.28
UPF3A-207ENST00000481131 NEK2P51955 445 aa7.04□□□□□ -1.28
UPF3A-207ENST00000481131 RAB3GAP1Q15042 981 aa7.04□□□□□ -1.28
UPF3A-207ENST00000481131 ABCB5Q2M3G0 1257 aa7.04□□□□□ -1.28
UPF3A-207ENST00000481131 PLEKHN1Q494U1 663 aaPredicted RBP7.04□□□□□ -1.28
UPF3A-207ENST00000481131 GPR158Q5T848 1215 aa7.04□□□□□ -1.28
UPF3A-207ENST00000481131 CMIPQ8IY22 773 aa7.04□□□□□ -1.28
UPF3A-207ENST00000481131 TTLL11Q8NHH1 800 aa7.04□□□□□ -1.28
UPF3A-207ENST00000481131 TSPAN17Q96FV3 270 aa7.04□□□□□ -1.28
UPF3A-207ENST00000481131 AHCYL2Q96HN2 611 aaKnown RBP7.04□□□□□ -1.28
UPF3A-207ENST00000481131 SCYL1Q96KG9 808 aa7.04□□□□□ -1.28
UPF3A-207ENST00000481131 C16orf92Q96LL3 132 aa7.04□□□□□ -1.28
UPF3A-207ENST00000481131 ACSS2Q9NR19 701 aa7.04□□□□□ -1.28
UPF3A-207ENST00000481131 TOPORSQ9NS56 1045 aaPredicted RBP7.04□□□□□ -1.28
UPF3A-207ENST00000481131 NUB1Q9Y5A7 615 aa7.04□□□□□ -1.28
UPF3A-207ENST00000481131 FZD9O00144 591 aa7.03□□□□□ -1.28
UPF3A-207ENST00000481131 MPOP05164 745 aa7.03□□□□□ -1.28
UPF3A-207ENST00000481131 TMEM253P0C7T8 217 aa7.03□□□□□ -1.28
UPF3A-207ENST00000481131 SDHAP31040 664 aa7.03□□□□□ -1.28
UPF3A-207ENST00000481131 THBS2P35442 1172 aa7.03□□□□□ -1.28
UPF3A-207ENST00000481131 IARSP41252 1262 aaKnown RBP7.03□□□□□ -1.28
UPF3A-207ENST00000481131 EPHB1P54762 984 aa7.03□□□□□ -1.28
UPF3A-207ENST00000481131 NR1I3Q14994 352 aa7.03□□□□□ -1.28
UPF3A-207ENST00000481131 RASSF3Q86WH2 238 aa7.03□□□□□ -1.28
UPF3A-207ENST00000481131 PASD1Q8IV76 773 aa7.03□□□□□ -1.28
UPF3A-207ENST00000481131 TRIM48Q8IWZ4 208 aa7.03□□□□□ -1.28
UPF3A-207ENST00000481131 ZNF610Q8N9Z0 462 aa7.03□□□□□ -1.28
UPF3A-207ENST00000481131 C14orf119Q9NWQ9 140 aa7.03□□□□□ -1.28
UPF3A-207ENST00000481131 CARMIL2Q6F5E8 1435 aa7.02□□□□□ -1.29
UPF3A-207ENST00000481131 FBXO21O94952 628 aa7.02□□□□□ -1.29
UPF3A-207ENST00000481131 CYP17A1P05093 508 aa7.02□□□□□ -1.29
UPF3A-207ENST00000481131 MMEP08473 750 aa7.02□□□□□ -1.29
UPF3A-207ENST00000481131 LSP1P33241 339 aa7.02□□□□□ -1.29
UPF3A-207ENST00000481131 MAPKAPK2P49137 400 aa7.02□□□□□ -1.29
UPF3A-207ENST00000481131 YBX1P67809 324 aaKnown RBP7.02□□□□□ -1.29
UPF3A-207ENST00000481131 KLF1Q13351 362 aaPredicted RBP7.02□□□□□ -1.29
UPF3A-207ENST00000481131 LRRC32Q14392 662 aa7.02□□□□□ -1.29
UPF3A-207ENST00000481131 PDCD1Q15116 288 aa7.02□□□□□ -1.29
UPF3A-207ENST00000481131 NFE2Q16621 373 aaPredicted RBP7.02□□□□□ -1.29
UPF3A-207ENST00000481131 PAN2Q504Q3 1202 aaKnown RBP7.02□□□□□ -1.29
UPF3A-207ENST00000481131 ATG4DQ86TL0 474 aaPredicted RBP7.02□□□□□ -1.29
UPF3A-207ENST00000481131 FMNL3Q8IVF7 1028 aa7.02□□□□□ -1.29
UPF3A-207ENST00000481131 ASB15Q8WXK1 588 aa7.02□□□□□ -1.29
UPF3A-207ENST00000481131 RTF1Q92541 710 aaKnown RBP7.02□□□□□ -1.29
UPF3A-207ENST00000481131 ZDHHC5Q9C0B5 715 aa7.02□□□□□ -1.29
UPF3A-207ENST00000481131 DBR1Q9UK59 544 aaKnown RBP7.02□□□□□ -1.29
UPF3A-207ENST00000481131 BICRAQ9NZM4 1560 aa7.01□□□□□ -1.29
UPF3A-207ENST00000481131 PRAMEF25A6NGN4 478 aa7.01□□□□□ -1.29
UPF3A-207ENST00000481131 FOXP2O15409 715 aa7.01□□□□□ -1.29
UPF3A-207ENST00000481131 ZBTB7AO95365 584 aa7.01□□□□□ -1.29
UPF3A-207ENST00000481131 FAHP16930 419 aa7.01□□□□□ -1.29
UPF3A-207ENST00000481131 FNTBP49356 437 aa7.01□□□□□ -1.29
UPF3A-207ENST00000481131 RAB27AP51159 221 aa7.01□□□□□ -1.29
UPF3A-207ENST00000481131 FAPQ12884 760 aa7.01□□□□□ -1.29
UPF3A-207ENST00000481131 SLC9A5Q14940 896 aa7.01□□□□□ -1.29
UPF3A-207ENST00000481131 LRRC41Q15345 812 aa7.01□□□□□ -1.29
UPF3A-207ENST00000481131 EPHA7Q15375 998 aa7.01□□□□□ -1.29
UPF3A-207ENST00000481131 MIB1Q86YT6 1006 aa7.01□□□□□ -1.29
UPF3A-207ENST00000481131 FOXRED1Q96CU9 486 aaPredicted RBP7.01□□□□□ -1.29
UPF3A-207ENST00000481131 ZNF496Q96IT1 587 aaPredicted RBP7.01□□□□□ -1.29
UPF3A-207ENST00000481131 SLC6A17Q9H1V8 727 aa7.01□□□□□ -1.29
UPF3A-207ENST00000481131 SEMA4AQ9H3S1 761 aa7.01□□□□□ -1.29
UPF3A-207ENST00000481131 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.01□□□□□ -1.29
UPF3A-207ENST00000481131 SHTN1A0MZ66 631 aa7□□□□□ -1.29
UPF3A-207ENST00000481131 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7□□□□□ -1.29
UPF3A-207ENST00000481131 AKAP10O43572 662 aa7□□□□□ -1.29
UPF3A-207ENST00000481131 MT-CO1P00395 513 aa7□□□□□ -1.29
UPF3A-207ENST00000481131 LRG1P02750 347 aa7□□□□□ -1.29
UPF3A-207ENST00000481131 PDE6BP35913 854 aa7□□□□□ -1.29
UPF3A-207ENST00000481131 FAM126BQ8IXS8 530 aa7□□□□□ -1.29
UPF3A-207ENST00000481131 TSR2Q969E8 191 aaKnown RBP7□□□□□ -1.29
UPF3A-207ENST00000481131 CHMP4CQ96CF2 233 aa7□□□□□ -1.29
UPF3A-207ENST00000481131 HOOK2Q96ED9 719 aa7□□□□□ -1.29
UPF3A-207ENST00000481131 DTLQ9NZJ0 730 aa7□□□□□ -1.29
UPF3A-207ENST00000481131 BTBD7Q9P203 1132 aa7□□□□□ -1.29
UPF3A-207ENST00000481131 NOC2LQ9Y3T9 749 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms