RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 IGBP1P78318 339 aa22.83■■□□□ 1.25
VPS36-204ENST00000480923 ADAM17P78536 824 aa22.83■■□□□ 1.25
VPS36-204ENST00000480923 GPNMBQ14956 572 aa22.83■■□□□ 1.25
VPS36-204ENST00000480923 INF2Q27J81 1249 aa22.83■■□□□ 1.25
VPS36-204ENST00000480923 FAM160B1Q5W0V3 765 aa22.83■■□□□ 1.25
VPS36-204ENST00000480923 TRAF7Q6Q0C0 670 aa22.83■■□□□ 1.25
VPS36-204ENST00000480923 ABHD15Q6UXT9 468 aa22.83■■□□□ 1.25
VPS36-204ENST00000480923 TNPO1Q92973 898 aaKnown RBP22.83■■□□□ 1.25
VPS36-204ENST00000480923 MTMR10Q9NXD2 777 aa22.83■■□□□ 1.25
VPS36-204ENST00000480923 TANC1Q9C0D5 1861 aa22.82■■□□□ 1.24
VPS36-204ENST00000480923 MSH4O15457 936 aa22.82■■□□□ 1.24
VPS36-204ENST00000480923 TDP2O95551 362 aa22.82■■□□□ 1.24
VPS36-204ENST00000480923 CTSHP09668 335 aa22.82■■□□□ 1.24
VPS36-204ENST00000480923 DNAJB2P25686 324 aa22.82■■□□□ 1.24
VPS36-204ENST00000480923 KRT76Q01546 638 aa22.82■■□□□ 1.24
VPS36-204ENST00000480923 PLCB4Q15147 1175 aa22.82■■□□□ 1.24
VPS36-204ENST00000480923 ZNF746Q6NUN9 644 aaPredicted RBP22.82■■□□□ 1.24
VPS36-204ENST00000480923 CCDC83Q8IWF9 413 aa22.82■■□□□ 1.24
VPS36-204ENST00000480923 ZNF302Q9NR11 478 aa22.82■■□□□ 1.24
VPS36-204ENST00000480923 TUBE1Q9UJT0 475 aa22.82■■□□□ 1.24
VPS36-204ENST00000480923 IGKV6D-21A0A0A0MT36 114 aa22.81■■□□□ 1.24
VPS36-204ENST00000480923 RRN3P2A6NIE6 340 aa22.81■■□□□ 1.24
VPS36-204ENST00000480923 CAND2O75155 1236 aa22.81■■□□□ 1.24
VPS36-204ENST00000480923 CXCL10P02778 98 aa22.81■■□□□ 1.24
VPS36-204ENST00000480923 INSRRP14616 1297 aa22.81■■□□□ 1.24
VPS36-204ENST00000480923 FOSBP53539 338 aa22.81■■□□□ 1.24
VPS36-204ENST00000480923 ST3GAL1Q11201 340 aa22.81■■□□□ 1.24
VPS36-204ENST00000480923 SWSAP1Q6NVH7 229 aa22.81■■□□□ 1.24
VPS36-204ENST00000480923 RUFY4Q6ZNE9 571 aa22.81■■□□□ 1.24
VPS36-204ENST00000480923 CCDC60Q8IWA6 550 aaPredicted RBP22.81■■□□□ 1.24
VPS36-204ENST00000480923 SMAP1Q8IYB5 467 aaPredicted RBP22.81■■□□□ 1.24
VPS36-204ENST00000480923 OXER1Q8TDS5 423 aa22.81■■□□□ 1.24
VPS36-204ENST00000480923 ZSCAN31Q96LW9 406 aaPredicted RBP22.81■■□□□ 1.24
VPS36-204ENST00000480923 PBX4Q9BYU1 374 aa22.81■■□□□ 1.24
VPS36-204ENST00000480923 BRMS1Q9HCU9 246 aa22.81■■□□□ 1.24
VPS36-204ENST00000480923 SAMM50Q9Y512 469 aa22.81■■□□□ 1.24
VPS36-204ENST00000480923 POTEB3A0JP26 581 aa22.8■■□□□ 1.24
VPS36-204ENST00000480923 GAS7O60861 476 aa22.8■■□□□ 1.24
VPS36-204ENST00000480923 ATP2A2P16615 1042 aaKnown RBP22.8■■□□□ 1.24
VPS36-204ENST00000480923 PBX2P40425 430 aa22.8■■□□□ 1.24
VPS36-204ENST00000480923 SLC26A2P50443 739 aa22.8■■□□□ 1.24
VPS36-204ENST00000480923 TRIM29Q14134 588 aa22.8■■□□□ 1.24
VPS36-204ENST00000480923 MBTPS1Q14703 1052 aa22.8■■□□□ 1.24
VPS36-204ENST00000480923 LETM2Q2VYF4 491 aa22.8■■□□□ 1.24
VPS36-204ENST00000480923 Q4G0T1 1027 aa22.8■■□□□ 1.24
VPS36-204ENST00000480923 TAF2Q6P1X5 1199 aa22.8■■□□□ 1.24
VPS36-204ENST00000480923 PDXDC2PQ6P474 469 aa22.8■■□□□ 1.24
VPS36-204ENST00000480923 CNKSR3Q6P9H4 555 aa22.8■■□□□ 1.24
VPS36-204ENST00000480923 POTEBQ6S5H4 581 aa22.8■■□□□ 1.24
VPS36-204ENST00000480923 PIK3AP1Q6ZUJ8 805 aa22.8■■□□□ 1.24
VPS36-204ENST00000480923 TIFAQ96CG3 184 aa22.8■■□□□ 1.24
VPS36-204ENST00000480923 SEMA6BQ9H3T3 888 aa22.8■■□□□ 1.24
VPS36-204ENST00000480923 MSRAQ9UJ68 235 aa22.8■■□□□ 1.24
VPS36-204ENST00000480923 SCN5AQ14524 2016 aa22.8■■□□□ 1.24
VPS36-204ENST00000480923 CYP3A7-CYP3A51PA0A087WV96 503 aa22.79■■□□□ 1.24
VPS36-204ENST00000480923 BAIAP3O94812 1187 aa22.79■■□□□ 1.24
VPS36-204ENST00000480923 PSAPP07602 524 aa22.79■■□□□ 1.24
VPS36-204ENST00000480923 CYP3A7P24462 503 aa22.79■■□□□ 1.24
VPS36-204ENST00000480923 KRT2P35908 639 aa22.79■■□□□ 1.24
VPS36-204ENST00000480923 RAB30Q15771 203 aa22.79■■□□□ 1.24
VPS36-204ENST00000480923 MARCH8Q5T0T0 291 aa22.79■■□□□ 1.24
VPS36-204ENST00000480923 LRCH2Q5VUJ6 765 aa22.79■■□□□ 1.24
VPS36-204ENST00000480923 MOXD1Q6UVY6 613 aa22.79■■□□□ 1.24
VPS36-204ENST00000480923 NEK8Q86SG6 692 aa22.79■■□□□ 1.24
VPS36-204ENST00000480923 RSPH3Q86UC2 560 aa22.79■■□□□ 1.24
VPS36-204ENST00000480923 CKAP2LQ8IYA6 745 aa22.79■■□□□ 1.24
VPS36-204ENST00000480923 SLC5A5Q92911 643 aa22.79■■□□□ 1.24
VPS36-204ENST00000480923 RIT2Q99578 217 aa22.79■■□□□ 1.24
VPS36-204ENST00000480923 TEKT3Q9BXF9 490 aa22.79■■□□□ 1.24
VPS36-204ENST00000480923 TTYH1Q9H313 450 aaPredicted RBP22.79■■□□□ 1.24
VPS36-204ENST00000480923 DDX25Q9UHL0 483 aaKnown RBP22.79■■□□□ 1.24
VPS36-204ENST00000480923 PCDHA10Q9Y5I2 948 aa22.79■■□□□ 1.24
VPS36-204ENST00000480923 TMEM265A0A087WTH1 108 aa22.78■■□□□ 1.24
VPS36-204ENST00000480923 MBLAC1A4D2B0 266 aaPredicted RBP22.78■■□□□ 1.24
VPS36-204ENST00000480923 WDR64B1ANS9 1081 aa22.78■■□□□ 1.24
VPS36-204ENST00000480923 CHMP2AO43633 222 aa22.78■■□□□ 1.24
VPS36-204ENST00000480923 KCNJ6P48051 423 aa22.78■■□□□ 1.24
VPS36-204ENST00000480923 RABEP1Q15276 862 aa22.78■■□□□ 1.24
VPS36-204ENST00000480923 ATP8B4Q8TF62 1192 aa22.78■■□□□ 1.24
VPS36-204ENST00000480923 TRAPPC12Q8WVT3 735 aa22.78■■□□□ 1.24
VPS36-204ENST00000480923 GJA10Q969M2 543 aa22.78■■□□□ 1.24
VPS36-204ENST00000480923 ZBTB10Q96DT7 871 aa22.78■■□□□ 1.24
VPS36-204ENST00000480923 SH2B1Q9NRF2 756 aaPredicted RBP22.78■■□□□ 1.24
VPS36-204ENST00000480923 RBAK-RBAKDNI3L0D1 243 aa22.77■■□□□ 1.24
VPS36-204ENST00000480923 HBP1O60381 514 aa22.77■■□□□ 1.24
VPS36-204ENST00000480923 RABGGTBP53611 331 aa22.77■■□□□ 1.24
VPS36-204ENST00000480923 NR5A1Q13285 461 aa22.77■■□□□ 1.24
VPS36-204ENST00000480923 DNAJB3Q8WWF6 145 aa22.77■■□□□ 1.24
VPS36-204ENST00000480923 MBOAT7Q96N66 472 aa22.77■■□□□ 1.24
VPS36-204ENST00000480923 GUCD1Q96NT3 240 aa22.77■■□□□ 1.24
VPS36-204ENST00000480923 SLC9A7Q96T83 725 aa22.77■■□□□ 1.24
VPS36-204ENST00000480923 DISC1Q9NRI5 854 aa22.77■■□□□ 1.24
VPS36-204ENST00000480923 GABBR1Q9UBS5 961 aa22.77■■□□□ 1.24
VPS36-204ENST00000480923 LAMA2P24043 3122 aaKnown RBP22.77■■□□□ 1.24
VPS36-204ENST00000480923 TRIP12Q14669 1992 aaPredicted RBP22.76■■□□□ 1.23
VPS36-204ENST00000480923 MMP1P03956 469 aa22.76■■□□□ 1.23
VPS36-204ENST00000480923 IKBKEQ14164 716 aa22.76■■□□□ 1.23
VPS36-204ENST00000480923 TCTN1Q2MV58 587 aa22.76■■□□□ 1.23
VPS36-204ENST00000480923 KRT40Q6A162 431 aa22.76■■□□□ 1.23
VPS36-204ENST00000480923 TRMT1LQ7Z2T5 733 aaKnown RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms