RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 IGSF9BQ9UPX0 1349 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 TELO2Q9Y4R8 837 aa18.87■□□□□ 0.61
SCAMP3-207ENST00000480219 EMSYQ7Z589 1322 aa18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 CTAGE5O15320 804 aa18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 DKC1O60832 514 aaKnown RBP eCLIP18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 XRCC6P12956 609 aaKnown RBP eCLIP18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 AKR1A1P14550 325 aa18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 STAT6P42226 847 aa18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 TNFAIP2Q03169 654 aa18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 HSDL1Q3SXM5 330 aa18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 PRAMEF19Q5SWL8 479 aa18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 MIS18BP1Q6P0N0 1132 aa18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 KCNK18Q7Z418 384 aa18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 CNNM3Q8NE01 707 aa18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 PPTC7Q8NI37 304 aa18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 COPS5Q92905 334 aa18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 DHX58Q96C10 678 aa18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 CDK5RAP3Q96JB5 506 aa18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 MTRQ99707 1265 aa18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 LXNQ9BS40 222 aa18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 NUP62CLQ9H1M0 184 aa18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 WRAP73Q9P2S5 460 aaPredicted RBP18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 TSKSQ9UJT2 592 aa18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 MAFBQ9Y5Q3 323 aaPredicted RBP18.86■□□□□ 0.61
SCAMP3-207ENST00000480219 MYL1P05976 194 aa18.85■□□□□ 0.61
SCAMP3-207ENST00000480219 PSMC5P62195 406 aa18.85■□□□□ 0.61
SCAMP3-207ENST00000480219 CACNB2Q08289 660 aaPredicted RBP18.85■□□□□ 0.61
SCAMP3-207ENST00000480219 TPRNQ4KMQ1 711 aa18.85■□□□□ 0.61
SCAMP3-207ENST00000480219 CAVIN1Q6NZI2 390 aaKnown RBP18.85■□□□□ 0.61
SCAMP3-207ENST00000480219 CNNM4Q6P4Q7 775 aa18.85■□□□□ 0.61
SCAMP3-207ENST00000480219 POTEGQ6S5H5 508 aa18.85■□□□□ 0.61
SCAMP3-207ENST00000480219 CCDC60Q8IWA6 550 aaPredicted RBP18.85■□□□□ 0.61
SCAMP3-207ENST00000480219 RAET1EQ8TD07 263 aa18.85■□□□□ 0.61
SCAMP3-207ENST00000480219 RAD54LQ92698 747 aa18.85■□□□□ 0.61
SCAMP3-207ENST00000480219 PANK2Q9BZ23 570 aa18.85■□□□□ 0.61
SCAMP3-207ENST00000480219 TNMDQ9H2S6 317 aa18.85■□□□□ 0.61
SCAMP3-207ENST00000480219 KIAA1024Q9UPX6 916 aa18.85■□□□□ 0.61
SCAMP3-207ENST00000480219 WDR81Q562E7 1941 aa18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 HTTP42858 3142 aa18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 A6NJR5 290 aa18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 SEPT4O43236 478 aa18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 STBD1O95210 358 aa18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 EYA4O95677 639 aa18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 HSPA8P11142 646 aaKnown RBP18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 ELNP15502 786 aa18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 CYP4A11Q02928 519 aa18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 UGCGQ16739 394 aa18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 CEP57L1Q8IYX8 460 aa18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 SPATA20Q8TB22 786 aa18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 LARP4BQ92615 738 aaKnown RBP18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 ATP6V0A1Q93050 837 aa18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 CCDC34Q96HJ3 373 aa18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 SPATA33Q96N06 139 aa18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 NACC1Q96RE7 527 aa18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 PCYT2Q99447 389 aa18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 SAMM50Q9Y512 469 aa18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 TRIM17Q9Y577 477 aa18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 LOXHD1Q8IVV2 1947 aa18.84■□□□□ 0.61
SCAMP3-207ENST00000480219 ZNF862O60290 1169 aa18.83■□□□□ 0.6
SCAMP3-207ENST00000480219 DUSP11O75319 330 aaKnown RBP18.83■□□□□ 0.6
SCAMP3-207ENST00000480219 TCF7P36402 384 aaPredicted RBP18.83■□□□□ 0.6
SCAMP3-207ENST00000480219 SLC26A2P50443 739 aa18.83■□□□□ 0.6
SCAMP3-207ENST00000480219 TRIM32Q13049 653 aa18.83■□□□□ 0.6
SCAMP3-207ENST00000480219 CTTNQ14247 550 aaKnown RBP18.83■□□□□ 0.6
SCAMP3-207ENST00000480219 GJC2Q5T442 439 aaPredicted RBP18.83■□□□□ 0.6
SCAMP3-207ENST00000480219 PLPPR4Q7Z2D5 763 aa18.83■□□□□ 0.6
SCAMP3-207ENST00000480219 SYT2Q8N9I0 419 aaPredicted RBP18.83■□□□□ 0.6
SCAMP3-207ENST00000480219 BANK1Q8NDB2 785 aa18.83■□□□□ 0.6
SCAMP3-207ENST00000480219 RASSF8Q8NHQ8 419 aa18.83■□□□□ 0.6
SCAMP3-207ENST00000480219 PAGE5Q96GU1 130 aa18.83■□□□□ 0.6
SCAMP3-207ENST00000480219 UPF3AQ9H1J1 476 aaKnown RBP18.83■□□□□ 0.6
SCAMP3-207ENST00000480219 ANKEF1Q9NU02 776 aa18.83■□□□□ 0.6
SCAMP3-207ENST00000480219 DBR1Q9UK59 544 aaKnown RBP18.83■□□□□ 0.6
SCAMP3-207ENST00000480219 DNM3Q9UQ16 869 aa18.83■□□□□ 0.6
SCAMP3-207ENST00000480219 PTPN22Q9Y2R2 807 aa18.83■□□□□ 0.6
SCAMP3-207ENST00000480219 PPFIA4O75335 1185 aa18.82■□□□□ 0.6
SCAMP3-207ENST00000480219 LETM1O95202 739 aaPredicted RBP18.82■□□□□ 0.6
SCAMP3-207ENST00000480219 PRKAR2AP13861 404 aaKnown RBP18.82■□□□□ 0.6
SCAMP3-207ENST00000480219 SLC12A3P55017 1021 aa18.82■□□□□ 0.6
SCAMP3-207ENST00000480219 PSMC6P62333 389 aa18.82■□□□□ 0.6
SCAMP3-207ENST00000480219 NT5DC1Q5TFE4 455 aa18.82■□□□□ 0.6
SCAMP3-207ENST00000480219 SWSAP1Q6NVH7 229 aa18.82■□□□□ 0.6
SCAMP3-207ENST00000480219 TPH2Q8IWU9 490 aa18.82■□□□□ 0.6
SCAMP3-207ENST00000480219 OR6J1Q8NGC5 347 aa18.82■□□□□ 0.6
SCAMP3-207ENST00000480219 GABBR1Q9UBS5 961 aa18.82■□□□□ 0.6
SCAMP3-207ENST00000480219 HOOK1Q9UJC3 728 aaKnown RBP18.82■□□□□ 0.6
SCAMP3-207ENST00000480219 PTCH2Q9Y6C5 1203 aa18.82■□□□□ 0.6
SCAMP3-207ENST00000480219 E9PMD0 336 aa18.81■□□□□ 0.6
SCAMP3-207ENST00000480219 NOP56O00567 594 aaKnown RBP18.81■□□□□ 0.6
SCAMP3-207ENST00000480219 FOXN1O15353 648 aa18.81■□□□□ 0.6
SCAMP3-207ENST00000480219 MMP3P08254 477 aa18.81■□□□□ 0.6
SCAMP3-207ENST00000480219 PLA2G4BP0C869 781 aa18.81■□□□□ 0.6
SCAMP3-207ENST00000480219 ATP4AP20648 1035 aa18.81■□□□□ 0.6
SCAMP3-207ENST00000480219 GRK4P32298 578 aa18.81■□□□□ 0.6
SCAMP3-207ENST00000480219 GJA9P57773 515 aa18.81■□□□□ 0.6
SCAMP3-207ENST00000480219 POSTNQ15063 836 aa18.81■□□□□ 0.6
SCAMP3-207ENST00000480219 FAM160B1Q5W0V3 765 aa18.81■□□□□ 0.6
SCAMP3-207ENST00000480219 SV2BQ7L1I2 683 aa18.81■□□□□ 0.6
SCAMP3-207ENST00000480219 AFG1LQ8WV93 481 aa18.81■□□□□ 0.6
SCAMP3-207ENST00000480219 PLIN2Q99541 437 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms