RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 SRGAP2CP0DJJ0 459 aa7.82□□□□□ -1.16
COMMD3-212ENST00000479958 SURF1Q15526 300 aa7.82□□□□□ -1.16
COMMD3-212ENST00000479958 TRMT10BQ6PF06 316 aaKnown RBP7.82□□□□□ -1.16
COMMD3-212ENST00000479958 KISS1RQ969F8 398 aaPredicted RBP7.82□□□□□ -1.16
COMMD3-212ENST00000479958 MAGEB10Q96LZ2 347 aaPredicted RBP7.82□□□□□ -1.16
COMMD3-212ENST00000479958 KRTAP4-2Q9BYR5 136 aa7.82□□□□□ -1.16
COMMD3-212ENST00000479958 CNOT11Q9UKZ1 510 aaKnown RBP7.82□□□□□ -1.16
COMMD3-212ENST00000479958 IFT140Q96RY7 1462 aa7.82□□□□□ -1.16
COMMD3-212ENST00000479958 TTBK1Q5TCY1 1321 aaPredicted RBP7.82□□□□□ -1.16
COMMD3-212ENST00000479958 ARVCFO00192 962 aa7.81□□□□□ -1.16
COMMD3-212ENST00000479958 CHGBP05060 677 aa7.81□□□□□ -1.16
COMMD3-212ENST00000479958 BTBD8Q5XKL5 378 aa7.81□□□□□ -1.16
COMMD3-212ENST00000479958 DNAJC2Q99543 621 aaKnown RBP7.81□□□□□ -1.16
COMMD3-212ENST00000479958 OSBPL2Q9H1P3 480 aa7.81□□□□□ -1.16
COMMD3-212ENST00000479958 NDOR1Q9UHB4 597 aa7.81□□□□□ -1.16
COMMD3-212ENST00000479958 DUSP10Q9Y6W6 482 aa7.81□□□□□ -1.16
COMMD3-212ENST00000479958 ARAP1Q96P48 1450 aa7.8□□□□□ -1.16
COMMD3-212ENST00000479958 CRTAMO95727 393 aa7.8□□□□□ -1.16
COMMD3-212ENST00000479958 MLLT6P55198 1093 aaPredicted RBP7.8□□□□□ -1.16
COMMD3-212ENST00000479958 PLEKHH3Q7Z736 793 aa7.8□□□□□ -1.16
COMMD3-212ENST00000479958 OSTM1Q86WC4 334 aa7.8□□□□□ -1.16
COMMD3-212ENST00000479958 DTX3Q8N9I9 347 aa7.8□□□□□ -1.16
COMMD3-212ENST00000479958 BARX1Q9HBU1 254 aaPredicted RBP7.8□□□□□ -1.16
COMMD3-212ENST00000479958 ARHGAP20Q9P2F6 1191 aa7.8□□□□□ -1.16
COMMD3-212ENST00000479958 ATP23Q9Y6H3 246 aa7.8□□□□□ -1.16
COMMD3-212ENST00000479958 PYGMP11217 842 aa7.79□□□□□ -1.16
COMMD3-212ENST00000479958 PDE6AP16499 860 aa7.79□□□□□ -1.16
COMMD3-212ENST00000479958 BUD31P41223 144 aaPredicted RBP7.79□□□□□ -1.16
COMMD3-212ENST00000479958 PFKPQ01813 784 aa7.79□□□□□ -1.16
COMMD3-212ENST00000479958 PROSER1Q86XN7 944 aa7.79□□□□□ -1.16
COMMD3-212ENST00000479958 JMYQ8N9B5 988 aa7.79□□□□□ -1.16
COMMD3-212ENST00000479958 DRC1Q96MC2 740 aa7.79□□□□□ -1.16
COMMD3-212ENST00000479958 YTHDC1Q96MU7 727 aaKnown RBP7.79□□□□□ -1.16
COMMD3-212ENST00000479958 CD244Q9BZW8 370 aa7.79□□□□□ -1.16
COMMD3-212ENST00000479958 RIC8BQ9NVN3 520 aa7.79□□□□□ -1.16
COMMD3-212ENST00000479958 RBPJLQ9UBG7 517 aa7.79□□□□□ -1.16
COMMD3-212ENST00000479958 SRPK3Q9UPE1 567 aa7.79□□□□□ -1.16
COMMD3-212ENST00000479958 WASF3Q9UPY6 502 aa7.79□□□□□ -1.16
COMMD3-212ENST00000479958 TELO2Q9Y4R8 837 aa7.79□□□□□ -1.16
COMMD3-212ENST00000479958 CUL7Q14999 1698 aa7.78□□□□□ -1.16
COMMD3-212ENST00000479958 PBRM1Q86U86 1689 aa7.78□□□□□ -1.16
COMMD3-212ENST00000479958 K7ESM1 405 aa7.78□□□□□ -1.16
COMMD3-212ENST00000479958 KRT15P19012 456 aa7.78□□□□□ -1.16
COMMD3-212ENST00000479958 GJA4P35212 333 aa7.78□□□□□ -1.16
COMMD3-212ENST00000479958 DNM2P50570 870 aa7.78□□□□□ -1.16
COMMD3-212ENST00000479958 SMAD2Q15796 467 aaKnown RBP7.78□□□□□ -1.16
COMMD3-212ENST00000479958 SKIDA1Q1XH10 827 aa7.78□□□□□ -1.16
COMMD3-212ENST00000479958 SKOR2Q2VWA4 1001 aaPredicted RBP7.78□□□□□ -1.16
COMMD3-212ENST00000479958 CD276Q5ZPR3 534 aa7.78□□□□□ -1.16
COMMD3-212ENST00000479958 IGDCC4Q8TDY8 1250 aa7.78□□□□□ -1.16
COMMD3-212ENST00000479958 INVSQ9Y283 1065 aa7.78□□□□□ -1.16
COMMD3-212ENST00000479958 ZNF536O15090 1300 aa7.78□□□□□ -1.16
COMMD3-212ENST00000479958 ARHGAP35Q9NRY4 1499 aa7.78□□□□□ -1.16
COMMD3-212ENST00000479958 PTPN1P18031 435 aaKnown RBP7.78□□□□□ -1.16
COMMD3-212ENST00000479958 GLRBP48167 497 aa7.78□□□□□ -1.16
COMMD3-212ENST00000479958 C2orf27AQ580R0 203 aa7.78□□□□□ -1.16
COMMD3-212ENST00000479958 PRRT2Q7Z6L0 340 aaPredicted RBP7.78□□□□□ -1.16
COMMD3-212ENST00000479958 KLHL36Q8N4N3 616 aa7.78□□□□□ -1.16
COMMD3-212ENST00000479958 SH3RF2Q8TEC5 729 aa7.78□□□□□ -1.16
COMMD3-212ENST00000479958 MRFAP1L1Q96HT8 127 aa7.78□□□□□ -1.16
COMMD3-212ENST00000479958 MRPL4Q9BYD3 311 aaKnown RBP7.78□□□□□ -1.16
COMMD3-212ENST00000479958 CDK11AQ9UQ88 783 aaPredicted RBP7.78□□□□□ -1.16
COMMD3-212ENST00000479958 ZDHHC9Q9Y397 364 aa7.78□□□□□ -1.16
COMMD3-212ENST00000479958 GRIN2BQ13224 1484 aa7.77□□□□□ -1.17
COMMD3-212ENST00000479958 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.77□□□□□ -1.17
COMMD3-212ENST00000479958 TCRBV5S4A2TA0A5A2 114 aa7.77□□□□□ -1.17
COMMD3-212ENST00000479958 CCDC66A2RUB6 948 aa7.77□□□□□ -1.17
COMMD3-212ENST00000479958 ZNF839A8K0R7 811 aa7.77□□□□□ -1.17
COMMD3-212ENST00000479958 ACOT7O00154 380 aa7.77□□□□□ -1.17
COMMD3-212ENST00000479958 PLATP00750 562 aa7.77□□□□□ -1.17
COMMD3-212ENST00000479958 LACTBP83111 547 aaPredicted RBP7.77□□□□□ -1.17
COMMD3-212ENST00000479958 NFATC3Q12968 1075 aa7.77□□□□□ -1.17
COMMD3-212ENST00000479958 SPATS1Q496A3 300 aa7.77□□□□□ -1.17
COMMD3-212ENST00000479958 DPP8Q6V1X1 898 aaPredicted RBP7.77□□□□□ -1.17
COMMD3-212ENST00000479958 PTRH1Q86Y79 214 aaKnown RBP7.77□□□□□ -1.17
COMMD3-212ENST00000479958 SLC52A2Q9HAB3 445 aa7.77□□□□□ -1.17
COMMD3-212ENST00000479958 ARHGAP28Q9P2N2 729 aa7.77□□□□□ -1.17
COMMD3-212ENST00000479958 SFMBT1Q9UHJ3 866 aa7.77□□□□□ -1.17
COMMD3-212ENST00000479958 ZFP69BQ9UJL9 534 aa7.77□□□□□ -1.17
COMMD3-212ENST00000479958 VPS8Q8N3P4 1428 aa7.77□□□□□ -1.17
COMMD3-212ENST00000479958 EIF4G3O43432 1585 aaKnown RBP7.76□□□□□ -1.17
COMMD3-212ENST00000479958 FHAD1B1AJZ9 1412 aa7.76□□□□□ -1.17
COMMD3-212ENST00000479958 NPTXRO95502 500 aa7.76□□□□□ -1.17
COMMD3-212ENST00000479958 ADAMTS12P58397 1594 aa7.76□□□□□ -1.17
COMMD3-212ENST00000479958 DBPQ10586 325 aaPredicted RBP7.76□□□□□ -1.17
COMMD3-212ENST00000479958 TRIM61Q5EBN2 209 aa7.76□□□□□ -1.17
COMMD3-212ENST00000479958 FIGNQ5HY92 759 aa7.76□□□□□ -1.17
COMMD3-212ENST00000479958 SNAPC4Q5SXM2 1469 aa7.76□□□□□ -1.17
COMMD3-212ENST00000479958 GSTCDQ8NEC7 633 aa7.76□□□□□ -1.17
COMMD3-212ENST00000479958 ZCCHC14Q8WYQ9 949 aaKnown RBP7.76□□□□□ -1.17
COMMD3-212ENST00000479958 CBLCQ9ULV8 474 aa7.76□□□□□ -1.17
COMMD3-212ENST00000479958 MAN2B1O00754 1011 aa7.75□□□□□ -1.17
COMMD3-212ENST00000479958 CLASP2O75122 1294 aaKnown RBP7.75□□□□□ -1.17
COMMD3-212ENST00000479958 AMY2AP04746 511 aa7.75□□□□□ -1.17
COMMD3-212ENST00000479958 ITGB3P05106 788 aa7.75□□□□□ -1.17
COMMD3-212ENST00000479958 AMY2BP19961 511 aa7.75□□□□□ -1.17
COMMD3-212ENST00000479958 JAM2P57087 298 aa7.75□□□□□ -1.17
COMMD3-212ENST00000479958 GLB1LQ6UWU2 654 aa7.75□□□□□ -1.17
COMMD3-212ENST00000479958 LILRB2Q8N423 598 aa7.75□□□□□ -1.17
COMMD3-212ENST00000479958 UBXN4Q92575 508 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms