RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 HTRA3P83110 453 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 DAB2P98082 770 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 KIF23Q02241 960 aaPredicted RBP7.18□□□□□ -1.26
SF3B1-209ENST00000479532 MAP2K1Q02750 393 aaPredicted RBP7.18□□□□□ -1.26
SF3B1-209ENST00000479532 TMEM67Q5HYA8 995 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 SHISA2Q6UWI4 295 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 NFXL1Q6ZNB6 911 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 STOX1Q6ZVD7 989 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 DHX32Q7L7V1 743 aaKnown RBP7.18□□□□□ -1.26
SF3B1-209ENST00000479532 CCDC84Q86UT8 332 aaPredicted RBP7.18□□□□□ -1.26
SF3B1-209ENST00000479532 MB21D2Q8IYB1 491 aaPredicted RBP7.18□□□□□ -1.26
SF3B1-209ENST00000479532 MKL1Q969V6 931 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 ZKSCAN3Q9BRR0 538 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 BACH2Q9BYV9 841 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 TM6SF1Q9BZW5 370 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 VCPKMTQ9H867 229 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 ZCCHC17Q9NP64 241 aaKnown RBP7.18□□□□□ -1.26
SF3B1-209ENST00000479532 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.18□□□□□ -1.26
SF3B1-209ENST00000479532 VTI1BQ9UEU0 232 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 PRDM4Q9UKN5 801 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 CTDP1Q9Y5B0 961 aaPredicted RBP7.18□□□□□ -1.26
SF3B1-209ENST00000479532 THSD7BQ9C0I4 1608 aa7.18□□□□□ -1.26
SF3B1-209ENST00000479532 SORBS3O60504 671 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 AOC2O75106 756 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 CALM1P0DP23 149 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 CALM2P0DP24 149 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 CALM3P0DP25 149 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 RPS6KB1P23443 525 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 GNA15P30679 374 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 SLC1A4P43007 532 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 TM4SF4P48230 202 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 IRX3P78415 501 aaPredicted RBP7.17□□□□□ -1.26
SF3B1-209ENST00000479532 JAG1P78504 1218 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 IKQ13123 557 aaPredicted RBP7.17□□□□□ -1.26
SF3B1-209ENST00000479532 ANKRD1Q15327 319 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 SHROOM1Q2M3G4 852 aaPredicted RBP7.17□□□□□ -1.26
SF3B1-209ENST00000479532 UTP14CQ5TAP6 766 aaKnown RBP7.17□□□□□ -1.26
SF3B1-209ENST00000479532 SLFN13Q68D06 897 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 RUFY3Q7L099 469 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 CYB5R4Q7L1T6 521 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 CHST3Q7LGC8 479 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 CATIPQ7Z7H3 387 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 ANKRD23Q86SG2 305 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 CLEC10AQ8IUN9 316 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 SMAP1Q8IYB5 467 aaPredicted RBP7.17□□□□□ -1.26
SF3B1-209ENST00000479532 LRRC47Q8N1G4 583 aaKnown RBP7.17□□□□□ -1.26
SF3B1-209ENST00000479532 ENAHQ8N8S7 591 aaPredicted RBP7.17□□□□□ -1.26
SF3B1-209ENST00000479532 GMCL1P1Q8NEA9 526 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 ACER1Q8TDN7 264 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 DCAF4Q8WV16 495 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 C12orf42Q96LP6 360 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 TANGO6Q9C0B7 1094 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 IL17RBQ9NRM6 502 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 AGTPBP1Q9UPW5 1226 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 SLC45A1Q9Y2W3 748 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 STARD13Q9Y3M8 1113 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 TACC3Q9Y6A5 838 aa7.17□□□□□ -1.26
SF3B1-209ENST00000479532 A0A0A0MRY4 1105 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 F5H6K3 240 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 PDHXO00330 501 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 SH2B2O14492 632 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-209ENST00000479532 EFSO43281 561 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 CA12O43570 354 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 NMT2O60551 498 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 LILRB5O75023 590 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 DDAH1O94760 285 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 VCAM1P19320 739 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 LIFRP42702 1097 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 NOVP48745 357 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 KLRC3Q07444 240 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 SFSWAPQ12872 951 aaKnown RBP7.16□□□□□ -1.26
SF3B1-209ENST00000479532 TAF1CQ15572 869 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-209ENST00000479532 CCDC96Q2M329 555 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 ADCK5Q3MIX3 580 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 GPATCH4Q5T3I0 446 aaKnown RBP7.16□□□□□ -1.26
SF3B1-209ENST00000479532 RCSD1Q6JBY9 416 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 Q6ZUG5 572 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 FAM160B2Q86V87 743 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 SMCR8Q8TEV9 937 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-209ENST00000479532 CHURC1Q8WUH1 139 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 BRI3BPQ8WY22 251 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 ANKS1AQ92625 1134 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 CCDC74AQ96AQ1 378 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 PARK7Q99497 189 aaKnown RBP7.16□□□□□ -1.26
SF3B1-209ENST00000479532 TMEM47Q9BQJ4 181 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 RPAP3Q9H6T3 665 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-209ENST00000479532 ZFYVE28Q9HCC9 887 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 PDRG1Q9NUG6 133 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 FEM1BQ9UK73 627 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 NAP1L2Q9ULW6 460 aaPredicted RBP7.16□□□□□ -1.26
SF3B1-209ENST00000479532 SLC12A7Q9Y666 1083 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 TAF6LQ9Y6J9 622 aa7.16□□□□□ -1.26
SF3B1-209ENST00000479532 A0A1W2PRG0 241 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 BTBD19C9JJ37 291 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 FLOT1O75955 427 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 NDUFB10O96000 172 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 PARP1P09874 1014 aaKnown RBP7.15□□□□□ -1.26
SF3B1-209ENST00000479532 BMP3P12645 472 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 HOXA7P31268 230 aaPredicted RBP7.15□□□□□ -1.26
SF3B1-209ENST00000479532 KIF5BP33176 963 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms