RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 GRM4Q14833 912 aa18.56■□□□□ 0.56
DDX56-210ENST00000479440 GRIK4Q16099 956 aa18.56■□□□□ 0.56
DDX56-210ENST00000479440 ADGRD2Q7Z7M1 963 aa18.56■□□□□ 0.56
DDX56-210ENST00000479440 POF1BQ8WVV4 589 aa18.56■□□□□ 0.56
DDX56-210ENST00000479440 LNPKQ9C0E8 428 aa18.56■□□□□ 0.56
DDX56-210ENST00000479440 ERAP1Q9NZ08 941 aa18.56■□□□□ 0.56
DDX56-210ENST00000479440 USP15Q9Y4E8 981 aaPredicted RBP18.56■□□□□ 0.56
DDX56-210ENST00000479440 TECTAO75443 2155 aa18.56■□□□□ 0.56
DDX56-210ENST00000479440 KMT2EQ8IZD2 1858 aa18.56■□□□□ 0.56
DDX56-210ENST00000479440 M0QZ92 97 aa18.55■□□□□ 0.56
DDX56-210ENST00000479440 DNAJB1P25685 340 aa18.55■□□□□ 0.56
DDX56-210ENST00000479440 MRPS6P82932 125 aaKnown RBP18.55■□□□□ 0.56
DDX56-210ENST00000479440 PCNX4Q63HM2 1172 aa18.55■□□□□ 0.56
DDX56-210ENST00000479440 KLHL23Q8NBE8 558 aa18.55■□□□□ 0.56
DDX56-210ENST00000479440 SMARCC2Q8TAQ2 1214 aa18.55■□□□□ 0.56
DDX56-210ENST00000479440 SPPL3Q8TCT6 385 aa18.55■□□□□ 0.56
DDX56-210ENST00000479440 DNAJB3Q8WWF6 145 aa18.55■□□□□ 0.56
DDX56-210ENST00000479440 LINC01599Q8WXQ3 324 aa18.55■□□□□ 0.56
DDX56-210ENST00000479440 CUL5Q93034 780 aa18.55■□□□□ 0.56
DDX56-210ENST00000479440 CDHR1Q96JP9 859 aa18.55■□□□□ 0.56
DDX56-210ENST00000479440 BARX2Q9UMQ3 279 aaPredicted RBP18.55■□□□□ 0.56
DDX56-210ENST00000479440 KIAA1671Q9BY89 1806 aa18.54■□□□□ 0.56
DDX56-210ENST00000479440 MBLAC1A4D2B0 266 aaPredicted RBP18.54■□□□□ 0.56
DDX56-210ENST00000479440 GLP2RO95838 553 aa18.54■□□□□ 0.56
DDX56-210ENST00000479440 MARK3P27448 753 aa18.54■□□□□ 0.56
DDX56-210ENST00000479440 CD52P31358 61 aa18.54■□□□□ 0.56
DDX56-210ENST00000479440 TRDNQ13061 729 aa18.54■□□□□ 0.56
DDX56-210ENST00000479440 PAN2Q504Q3 1202 aaKnown RBP18.54■□□□□ 0.56
DDX56-210ENST00000479440 SQORQ9Y6N5 450 aa18.54■□□□□ 0.56
DDX56-210ENST00000479440 ERICH2A1L162 156 aa18.53■□□□□ 0.56
DDX56-210ENST00000479440 SRGAP2BP0DMP2 458 aa18.53■□□□□ 0.56
DDX56-210ENST00000479440 ATF7P17544 494 aaPredicted RBP18.53■□□□□ 0.56
DDX56-210ENST00000479440 UBE3AQ05086 875 aa18.53■□□□□ 0.56
DDX56-210ENST00000479440 SLC35G1Q2M3R5 365 aa18.53■□□□□ 0.56
DDX56-210ENST00000479440 IER5Q5VY09 327 aa18.53■□□□□ 0.56
DDX56-210ENST00000479440 RBM23Q86U06 439 aaKnown RBP18.53■□□□□ 0.56
DDX56-210ENST00000479440 SEPT1Q8WYJ6 367 aa18.53■□□□□ 0.56
DDX56-210ENST00000479440 GLG1Q92896 1179 aa18.53■□□□□ 0.56
DDX56-210ENST00000479440 GPRASP2Q96D09 838 aa18.53■□□□□ 0.56
DDX56-210ENST00000479440 RPGRIP1Q96KN7 1286 aa18.53■□□□□ 0.56
DDX56-210ENST00000479440 CDCA3Q99618 268 aaPredicted RBP18.53■□□□□ 0.56
DDX56-210ENST00000479440 DOCK5Q9H7D0 1870 aa18.53■□□□□ 0.56
DDX56-210ENST00000479440 TELO2Q9Y4R8 837 aa18.53■□□□□ 0.56
DDX56-210ENST00000479440 TRPV2Q9Y5S1 764 aa18.53■□□□□ 0.56
DDX56-210ENST00000479440 CYTH3O43739 400 aa18.52■□□□□ 0.56
DDX56-210ENST00000479440 SCG2P13521 617 aa18.52■□□□□ 0.56
DDX56-210ENST00000479440 PAK2Q13177 524 aa18.52■□□□□ 0.56
DDX56-210ENST00000479440 CYB5R4Q7L1T6 521 aa18.52■□□□□ 0.56
DDX56-210ENST00000479440 SMARCAD1Q9H4L7 1026 aa18.52■□□□□ 0.56
DDX56-210ENST00000479440 AGO3Q9H9G7 860 aaKnown RBP18.52■□□□□ 0.56
DDX56-210ENST00000479440 FAM86C1Q9NVL1 165 aa18.52■□□□□ 0.56
DDX56-210ENST00000479440 LRFN2Q9ULH4 789 aa18.52■□□□□ 0.56
DDX56-210ENST00000479440 TTC3P53804 2025 aa18.52■□□□□ 0.55
DDX56-210ENST00000479440 RRN3P2A6NIE6 340 aa18.51■□□□□ 0.55
DDX56-210ENST00000479440 VCPP55072 806 aaKnown RBP18.51■□□□□ 0.55
DDX56-210ENST00000479440 IGBP1P78318 339 aa18.51■□□□□ 0.55
DDX56-210ENST00000479440 FOXK2Q01167 660 aa18.51■□□□□ 0.55
DDX56-210ENST00000479440 PTPN21Q16825 1174 aa18.51■□□□□ 0.55
DDX56-210ENST00000479440 ATOH1Q92858 354 aaPredicted RBP18.51■□□□□ 0.55
DDX56-210ENST00000479440 TNPO1Q92973 898 aaKnown RBP18.51■□□□□ 0.55
DDX56-210ENST00000479440 ASIC4Q96FT7 647 aa18.51■□□□□ 0.55
DDX56-210ENST00000479440 NEK1Q96PY6 1258 aa18.51■□□□□ 0.55
DDX56-210ENST00000479440 FAM49AQ9H0Q0 323 aaPredicted RBP18.51■□□□□ 0.55
DDX56-210ENST00000479440 OSBPL3Q9H4L5 887 aa18.51■□□□□ 0.55
DDX56-210ENST00000479440 TLE6Q9H808 572 aa18.51■□□□□ 0.55
DDX56-210ENST00000479440 TLR9Q9NR96 1032 aa18.51■□□□□ 0.55
DDX56-210ENST00000479440 AAASQ9NRG9 546 aa18.51■□□□□ 0.55
DDX56-210ENST00000479440 RNF216Q9NWF9 866 aaPredicted RBP18.51■□□□□ 0.55
DDX56-210ENST00000479440 PIK3CDO00329 1044 aa18.5■□□□□ 0.55
DDX56-210ENST00000479440 KCNA2P16389 499 aa18.5■□□□□ 0.55
DDX56-210ENST00000479440 NUBP1P53384 320 aa18.5■□□□□ 0.55
DDX56-210ENST00000479440 SART3Q15020 963 aaKnown RBP18.5■□□□□ 0.55
DDX56-210ENST00000479440 MARCH8Q5T0T0 291 aa18.5■□□□□ 0.55
DDX56-210ENST00000479440 SPOUT1Q5T280 376 aaKnown RBP18.5■□□□□ 0.55
DDX56-210ENST00000479440 ZBTB33Q86T24 672 aa18.5■□□□□ 0.55
DDX56-210ENST00000479440 CRIPAKQ8N1N5 446 aa18.5■□□□□ 0.55
DDX56-210ENST00000479440 MICAL1Q8TDZ2 1067 aa18.5■□□□□ 0.55
DDX56-210ENST00000479440 PCDHB12Q9Y5F1 795 aa18.5■□□□□ 0.55
DDX56-210ENST00000479440 MYO7AQ13402 2215 aa18.5■□□□□ 0.55
DDX56-210ENST00000479440 C5orf42Q9H799 3197 aa18.5■□□□□ 0.55
DDX56-210ENST00000479440 IGSF9BQ9UPX0 1349 aa18.49■□□□□ 0.55
DDX56-210ENST00000479440 IFIT3O14879 490 aaKnown RBP18.49■□□□□ 0.55
DDX56-210ENST00000479440 AVPR2P30518 371 aa18.49■□□□□ 0.55
DDX56-210ENST00000479440 WTAPQ15007 396 aa18.49■□□□□ 0.55
DDX56-210ENST00000479440 PDE12Q6L8Q7 609 aaKnown RBP18.49■□□□□ 0.55
DDX56-210ENST00000479440 FAM43BQ6ZT52 329 aaPredicted RBP18.49■□□□□ 0.55
DDX56-210ENST00000479440 CATIPQ7Z7H3 387 aa18.49■□□□□ 0.55
DDX56-210ENST00000479440 PIBF1Q8WXW3 757 aa18.49■□□□□ 0.55
DDX56-210ENST00000479440 SUSD6Q92537 303 aa18.49■□□□□ 0.55
DDX56-210ENST00000479440 SEC63Q9UGP8 760 aaKnown RBP18.49■□□□□ 0.55
DDX56-210ENST00000479440 PADI3Q9ULW8 664 aa18.49■□□□□ 0.55
DDX56-210ENST00000479440 GSTTP1A0A1W2PQM5 241 aa18.48■□□□□ 0.55
DDX56-210ENST00000479440 SARSP49591 514 aaKnown RBP18.48■□□□□ 0.55
DDX56-210ENST00000479440 TROAPQ12815 778 aa18.48■□□□□ 0.55
DDX56-210ENST00000479440 MTMR1Q13613 665 aa18.48■□□□□ 0.55
DDX56-210ENST00000479440 DUSP6Q16828 381 aa18.48■□□□□ 0.55
DDX56-210ENST00000479440 USP17L6PQ6QN14 398 aa18.48■□□□□ 0.55
DDX56-210ENST00000479440 RALYLQ86SE5 291 aaKnown RBP18.48■□□□□ 0.55
DDX56-210ENST00000479440 ATP8B4Q8TF62 1192 aa18.48■□□□□ 0.55
DDX56-210ENST00000479440 RRP36Q96EU6 259 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms