RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 TCTN1Q2MV58 587 aa4.78□□□□□ -1.64
COPS7B-220ENST00000479430 CERKLQ49MI3 558 aaPredicted RBP4.78□□□□□ -1.64
COPS7B-220ENST00000479430 RASIP1Q5U651 963 aa4.78□□□□□ -1.64
COPS7B-220ENST00000479430 SPTY2D1Q68D10 685 aaPredicted RBP4.78□□□□□ -1.64
COPS7B-220ENST00000479430 CXCL17Q6UXB2 119 aa4.78□□□□□ -1.64
COPS7B-220ENST00000479430 LBX2Q6XYB7 198 aa4.78□□□□□ -1.64
COPS7B-220ENST00000479430 EP400NLQ6ZTU2 488 aa4.78□□□□□ -1.64
COPS7B-220ENST00000479430 EEPD1Q7L9B9 569 aa4.78□□□□□ -1.64
COPS7B-220ENST00000479430 RNF180Q86T96 592 aa4.78□□□□□ -1.64
COPS7B-220ENST00000479430 SIAH1Q8IUQ4 282 aa4.78□□□□□ -1.64
COPS7B-220ENST00000479430 RNF217Q8TC41 542 aa4.78□□□□□ -1.64
COPS7B-220ENST00000479430 HNRNPLLQ8WVV9 542 aaKnown RBP4.78□□□□□ -1.64
COPS7B-220ENST00000479430 MKL1Q969V6 931 aa4.78□□□□□ -1.64
COPS7B-220ENST00000479430 SRPK1Q96SB4 655 aaKnown RBP4.78□□□□□ -1.64
COPS7B-220ENST00000479430 NT5C1AQ9BXI3 368 aa4.78□□□□□ -1.64
COPS7B-220ENST00000479430 CCDC8Q9H0W5 538 aaPredicted RBP4.78□□□□□ -1.64
COPS7B-220ENST00000479430 WNT8AQ9H1J5 351 aa4.78□□□□□ -1.64
COPS7B-220ENST00000479430 IL23AQ9NPF7 189 aa4.78□□□□□ -1.64
COPS7B-220ENST00000479430 HERC5Q9UII4 1024 aaKnown RBP4.78□□□□□ -1.64
COPS7B-220ENST00000479430 RIPK3Q9Y572 518 aa4.78□□□□□ -1.64
COPS7B-220ENST00000479430 ASTN1O14525 1302 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 GRIN2DO15399 1336 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 IL16Q14005 1332 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 MICAL3Q7RTP6 2002 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 ZDBF2Q9HCK1 2354 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 KIAA1671Q9BY89 1806 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 FIGNL2A6NMB9 653 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 H3BQ06 376 aaPredicted RBP4.77□□□□□ -1.65
COPS7B-220ENST00000479430 ERC2O15083 957 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 CTAGE5O15320 804 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 SRGAP3O43295 1099 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 PRKAB2O43741 272 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 GDF9O60383 454 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 B4GALT4O60513 344 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 IDH1O75874 414 aaKnown RBP4.77□□□□□ -1.65
COPS7B-220ENST00000479430 LDHCP07864 332 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 AKR1B1P15121 316 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 EPB42P16452 691 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 GARTP22102 1010 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 IL15P40933 162 aaPredicted RBP4.77□□□□□ -1.65
COPS7B-220ENST00000479430 SOX9P48436 509 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 CDK7P50613 346 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 GSTO1P78417 241 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 CNTN2Q02246 1040 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 PWP1Q13610 501 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 RAB33AQ14088 237 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 COG2Q14746 738 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 CLUL1Q15846 466 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 ZNF792Q3KQV3 632 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 TTC39AQ5SRH9 613 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 CCSAPQ6IQ19 270 aaPredicted RBP4.77□□□□□ -1.65
COPS7B-220ENST00000479430 DTHD1Q6ZMT9 781 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 NOL8Q76FK4 1167 aaKnown RBP4.77□□□□□ -1.65
COPS7B-220ENST00000479430 LYSMD3Q7Z3D4 306 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 FOXP4Q8IVH2 680 aaPredicted RBP4.77□□□□□ -1.65
COPS7B-220ENST00000479430 FAM126BQ8IXS8 530 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 CYP4X1Q8N118 509 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 CPXCR1Q8N123 301 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 LINC00528Q8N1L1 170 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 ZGPATQ8N5A5 531 aaKnown RBP4.77□□□□□ -1.65
COPS7B-220ENST00000479430 MAGEB6Q8N7X4 407 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 KLHDC9Q8NEP7 349 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 SDR42E1Q8WUS8 393 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 CPLX3Q8WVH0 158 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 HERVK_113Q902F9 699 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 ANAPC16Q96DE5 110 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 C12orf42Q96LP6 360 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 TCF12Q99081 682 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 NOL10Q9BSC4 688 aaKnown RBP4.77□□□□□ -1.65
COPS7B-220ENST00000479430 OXCT2Q9BYC2 517 aaPredicted RBP4.77□□□□□ -1.65
COPS7B-220ENST00000479430 RUBCNLQ9H714 662 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 KANSL2Q9H9L4 492 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 GPAMQ9HCL2 828 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 ABCB6Q9NP58 842 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 BRD7Q9NPI1 651 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 PDGFCQ9NRA1 345 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 HOMER2Q9NSB8 354 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 TRMT13Q9NUP7 481 aaKnown RBP4.77□□□□□ -1.65
COPS7B-220ENST00000479430 TOR4AQ9NXH8 423 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 SIRPGQ9P1W8 387 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 NOB1Q9ULX3 412 aaKnown RBP4.77□□□□□ -1.65
COPS7B-220ENST00000479430 COL4A6Q14031 1691 aa4.77□□□□□ -1.65
COPS7B-220ENST00000479430 MYH6P13533 1939 aa4.76□□□□□ -1.65
COPS7B-220ENST00000479430 A0A1B0GTH6 734 aa4.76□□□□□ -1.65
COPS7B-220ENST00000479430 PI4K2BG5E9Z4 385 aa4.76□□□□□ -1.65
COPS7B-220ENST00000479430 ARVCFO00192 962 aa4.76□□□□□ -1.65
COPS7B-220ENST00000479430 MARCH6O60337 910 aa4.76□□□□□ -1.65
COPS7B-220ENST00000479430 LPXNO60711 386 aa4.76□□□□□ -1.65
COPS7B-220ENST00000479430 MMP20O60882 483 aa4.76□□□□□ -1.65
COPS7B-220ENST00000479430 BCAR3O75815 825 aa4.76□□□□□ -1.65
COPS7B-220ENST00000479430 CIAO1O76071 339 aa4.76□□□□□ -1.65
COPS7B-220ENST00000479430 CLSTN1O94985 981 aa4.76□□□□□ -1.65
COPS7B-220ENST00000479430 HLA-DOAP06340 250 aa4.76□□□□□ -1.65
COPS7B-220ENST00000479430 CELA3AP09093 270 aa4.76□□□□□ -1.65
COPS7B-220ENST00000479430 FCER1AP12319 257 aa4.76□□□□□ -1.65
COPS7B-220ENST00000479430 BMP2P12643 396 aa4.76□□□□□ -1.65
COPS7B-220ENST00000479430 AKR1A1P14550 325 aa4.76□□□□□ -1.65
COPS7B-220ENST00000479430 ACPPP15309 386 aa4.76□□□□□ -1.65
COPS7B-220ENST00000479430 ATP2A2P16615 1042 aaKnown RBP4.76□□□□□ -1.65
COPS7B-220ENST00000479430 KCNA5P22460 613 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms