RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 CHMLP26374 656 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 HOXA13P31271 388 aaPredicted RBP7.67□□□□□ -1.18
VCP-205ENST00000479300 BMPR1AP36894 532 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 VCPP55072 806 aaKnown RBP7.67□□□□□ -1.18
VCP-205ENST00000479300 ADAM15Q13444 863 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 SMAD4Q13485 552 aaKnown RBP7.67□□□□□ -1.18
VCP-205ENST00000479300 WTAPQ15007 396 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 PGM5Q15124 567 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 FAM26DQ5JW98 314 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 CASC1Q6TDU7 716 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 RUFY4Q6ZNE9 571 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 TRIM67Q6ZTA4 783 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 STOX1Q6ZVD7 989 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 BMP8AQ7Z5Y6 402 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 CATIPQ7Z7H3 387 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 CRIPAKQ8N1N5 446 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 STAG2Q8N3U4 1231 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 LINC01599Q8WXQ3 324 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 CLP1Q92989 425 aaKnown RBP7.67□□□□□ -1.18
VCP-205ENST00000479300 MTMR8Q96EF0 704 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 IL17RAQ96F46 866 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 MFSD14AQ96MC6 490 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 AMNQ9BXJ7 453 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 TUT1Q9H6E5 874 aaKnown RBP7.67□□□□□ -1.18
VCP-205ENST00000479300 RRAGDQ9NQL2 400 aaPredicted RBP7.67□□□□□ -1.18
VCP-205ENST00000479300 SETD4Q9NVD3 440 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 FAM86C1Q9NVL1 165 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 PCDHGC5Q9Y5F6 944 aa7.67□□□□□ -1.18
VCP-205ENST00000479300 DMDP11532 3685 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 LOC730098B7Z3J9 87 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 STXBP3O00186 592 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 EYA4O95677 639 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 MMP1P03956 469 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 RB1P06400 928 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 GSPT1P15170 499 aaKnown RBP7.66□□□□□ -1.18
VCP-205ENST00000479300 MRPS9P82933 396 aaKnown RBP7.66□□□□□ -1.18
VCP-205ENST00000479300 ZXDAP98168 799 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 RBM10P98175 930 aaKnown RBP7.66□□□□□ -1.18
VCP-205ENST00000479300 MGAT3Q09327 533 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 CBX2Q14781 532 aaPredicted RBP7.66□□□□□ -1.18
VCP-205ENST00000479300 NFXL1Q6ZNB6 911 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 FIBCD1Q8N539 461 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 LMBR1Q8WVP7 490 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 ZNF689Q96CS4 500 aaPredicted RBP7.66□□□□□ -1.18
VCP-205ENST00000479300 ASIC4Q96FT7 647 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 UPF3BQ9BZI7 483 aaKnown RBP7.66□□□□□ -1.18
VCP-205ENST00000479300 LMAN2LQ9H0V9 348 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 IGFLR1Q9H665 355 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 EHMT1Q9H9B1 1298 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 CD207Q9UJ71 328 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 PLAGL2Q9UPG8 496 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 FAM50BQ9Y247 325 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 ADGRA3Q8IWK6 1321 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 TTC3P53804 2025 aa7.66□□□□□ -1.18
VCP-205ENST00000479300 VPS13AQ96RL7 3174 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 DCHS1Q96JQ0 3298 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 CCDC69A6NI79 296 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 E7EWF7 191 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 ENPP3O14638 875 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 ST18O60284 1047 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 CAND2O75155 1236 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 ITGB1P05556 798 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 TPM2P07951 284 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 GHRP10912 638 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 KIF5BP33176 963 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 PTPN5P54829 565 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 LPIN1Q14693 890 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 RNF20Q5VTR2 975 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 SYNE3Q6ZMZ3 975 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 RTN4RL1Q86UN2 441 aaPredicted RBP7.65□□□□□ -1.18
VCP-205ENST00000479300 HOMER1Q86YM7 354 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 TMTC2Q8N394 836 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 SAMD3Q8N6K7 520 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 SMRP1Q8NCR6 262 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 VN1R2Q8NFZ6 395 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 CTCFLQ8NI51 663 aaPredicted RBP7.65□□□□□ -1.18
VCP-205ENST00000479300 SPPL3Q8TCT6 385 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 PBXIP1Q96AQ6 731 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 ZBTB10Q96DT7 871 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 POP1Q99575 1024 aaKnown RBP7.65□□□□□ -1.18
VCP-205ENST00000479300 GPR20Q99678 358 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 C11orf84Q9BUA3 381 aaPredicted RBP7.65□□□□□ -1.18
VCP-205ENST00000479300 AGO3Q9H9G7 860 aaKnown RBP7.65□□□□□ -1.18
VCP-205ENST00000479300 PLXNA4Q9HCM2 1894 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 MAP3K20Q9NYL2 800 aaKnown RBP7.65□□□□□ -1.18
VCP-205ENST00000479300 BARX2Q9UMQ3 279 aaPredicted RBP7.65□□□□□ -1.18
VCP-205ENST00000479300 PCDHA1Q9Y5I3 950 aa7.65□□□□□ -1.18
VCP-205ENST00000479300 MRPL42Q9Y6G3 142 aaKnown RBP7.65□□□□□ -1.18
VCP-205ENST00000479300 FRMPD4Q14CM0 1322 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 GCOM1H8Y6P7 765 aaPredicted RBP7.64□□□□□ -1.19
VCP-205ENST00000479300 ZBTB5O15062 677 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 SGSM2O43147 1006 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 NCK2O43639 380 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 DGKIO75912 1065 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 PDGFBP01127 241 aaPredicted RBP7.64□□□□□ -1.19
VCP-205ENST00000479300 CYP21A2P08686 494 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 POLR2MP0CAP2 368 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 TGFB3P10600 412 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 GNAQP50148 359 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 GATMP50440 423 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms