RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 RFC2P35250 354 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 KRT2P35908 639 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 CCL23P55773 120 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 CHMP4BP1P59074 171 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 ZNF200P98182 395 aaPredicted RBP11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 GUCY1B3Q02153 619 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 SP4Q02446 784 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 GPNMBQ14956 572 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 SKOR2Q2VWA4 1001 aaPredicted RBP11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 UTP14CQ5TAP6 766 aaKnown RBP11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 KRT40Q6A162 431 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 PPP4R3AQ6IN85 833 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 ZNF746Q6NUN9 644 aaPredicted RBP11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 TRAF7Q6Q0C0 670 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 B3GNT9Q6UX72 402 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 ZNF365Q70YC5 407 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 RPAINQ86UA6 219 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 RPUSD2Q8IZ73 545 aaKnown RBP11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 RETREG2Q8NC44 543 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 AFAP1L1Q8TED9 768 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 SLC5A5Q92911 643 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.29□□□□□ -0.64e-9■■□□□ 13.8
SCAMP3-206ENST00000478737 ZNF577Q9BSK1 485 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 FOXD4L1Q9NU39 408 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 SETD4Q9NVD3 440 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 NOD1Q9Y239 953 aa11.29□□□□□ -0.6
SCAMP3-206ENST00000478737 C17orf102A2RUQ5 167 aa11.28□□□□□ -0.6
SCAMP3-206ENST00000478737 CAND2O75155 1236 aa11.28□□□□□ -0.6
SCAMP3-206ENST00000478737 PSMD10O75832 226 aa11.28□□□□□ -0.6
SCAMP3-206ENST00000478737 MMP1P03956 469 aa11.28□□□□□ -0.6
SCAMP3-206ENST00000478737 SELPP16109 830 aa11.28□□□□□ -0.6
SCAMP3-206ENST00000478737 STAT5BP51692 787 aa11.28□□□□□ -0.6
SCAMP3-206ENST00000478737 KRT76Q01546 638 aa11.28□□□□□ -0.6
SCAMP3-206ENST00000478737 SAFBQ15424 915 aaKnown RBP eCLIP11.28□□□□□ -0.6
SCAMP3-206ENST00000478737 INF2Q27J81 1249 aa11.28□□□□□ -0.6
SCAMP3-206ENST00000478737 PSRC1Q6PGN9 363 aaPredicted RBP11.28□□□□□ -0.6
SCAMP3-206ENST00000478737 CLEC17AQ6ZS10 378 aa11.28□□□□□ -0.6
SCAMP3-206ENST00000478737 SMAP1Q8IYB5 467 aaPredicted RBP11.28□□□□□ -0.6
SCAMP3-206ENST00000478737 CCDC155Q8N6L0 562 aa11.28□□□□□ -0.6
SCAMP3-206ENST00000478737 HERVK_113Q902F9 699 aa11.28□□□□□ -0.6
SCAMP3-206ENST00000478737 GLG1Q92896 1179 aa11.28□□□□□ -0.6
SCAMP3-206ENST00000478737 ATP6V0A1Q93050 837 aa11.28□□□□□ -0.6
SCAMP3-206ENST00000478737 WNT8BQ93098 351 aa11.28□□□□□ -0.6
SCAMP3-206ENST00000478737 INTS4Q96HW7 963 aaKnown RBP11.28□□□□□ -0.6
SCAMP3-206ENST00000478737 AZI2Q9H6S1 392 aa11.28□□□□□ -0.6
SCAMP3-206ENST00000478737 CCDC194A0A1B0GVG4 234 aa11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 RRN3P2A6NIE6 340 aa11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 BTBD18B2RXH4 712 aa11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 TREHO43280 583 aa11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 TDP2O95551 362 aa11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 FGBP02675 491 aa11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 CXCL10P02778 98 aa11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 ACRP10323 421 aa11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 CKBP12277 381 aa11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 GCFC2P16383 781 aaKnown RBP11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 SMAD3P84022 425 aaKnown RBP11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 EARS2Q5JPH6 523 aaKnown RBP11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 MARCH8Q5T0T0 291 aa11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 NEK8Q86SG6 692 aa11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 DIS3L2Q8IYB7 885 aaKnown RBP11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 FBXO18Q8NFZ0 1043 aa11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 ETNPPLQ8TBG4 499 aa11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 LMBR1Q8WVP7 490 aa11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 TNPO1Q92973 898 aaKnown RBP11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 SCLYQ96I15 445 aa11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 NAP1L4Q99733 375 aaKnown RBP11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 PCDHA10Q9Y5I2 948 aa11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 MAFBQ9Y5Q3 323 aaPredicted RBP11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 LTBP2Q14767 1821 aa11.27□□□□□ -0.61
SCAMP3-206ENST00000478737 ARID2Q68CP9 1835 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 H3BQV1 296 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 TBX3O15119 743 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 SLC34A2O95436 690 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 INSRRP14616 1297 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 ATP4AP20648 1035 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 PPFIA1Q13136 1202 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 NR5A1Q13285 461 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 GNL2Q13823 731 aaKnown RBP11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 PLCB4Q15147 1175 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 FAM26DQ5JW98 314 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 L1TD1Q5T7N2 865 aaKnown RBP11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 FAM109BQ6ICB4 259 aaPredicted RBP11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 SWSAP1Q6NVH7 229 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 MIS18BP1Q6P0N0 1132 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 TAF2Q6P1X5 1199 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 PIK3AP1Q6ZUJ8 805 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 LRRC8DQ7L1W4 858 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 CCDC60Q8IWA6 550 aaPredicted RBP11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 RDM1Q8NG50 284 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 ATP8B4Q8TF62 1192 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 LRCH3Q96II8 777 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 RNPC3Q96LT9 517 aaKnown RBP11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 FAM20AQ96MK3 541 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 KCNMB3Q9NPA1 279 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 LOXHD1Q8IVV2 1947 aa11.26□□□□□ -0.61
SCAMP3-206ENST00000478737 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 POTEB3A0JP26 581 aa11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 VPS37CA5D8V6 355 aaPredicted RBP11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 FAM205CA6NFA0 338 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms