RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 ZSCAN22P10073 491 aaPredicted RBP12.8□□□□□ -0.36
SRRT-211ENST00000478693 TECP42680 631 aa12.8□□□□□ -0.36
SRRT-211ENST00000478693 SLC26A2P50443 739 aa12.8□□□□□ -0.36
SRRT-211ENST00000478693 IGBP1P78318 339 aa12.8□□□□□ -0.36
SRRT-211ENST00000478693 PTPN11Q06124 597 aaPredicted RBP12.8□□□□□ -0.36
SRRT-211ENST00000478693 PPFIA1Q13136 1202 aa12.8□□□□□ -0.36
SRRT-211ENST00000478693 PTGDRQ13258 359 aa12.8□□□□□ -0.36
SRRT-211ENST00000478693 FOXD4L6Q3SYB3 417 aaPredicted RBP12.8□□□□□ -0.36
SRRT-211ENST00000478693 FOXD4L3Q6VB84 417 aaPredicted RBP12.8□□□□□ -0.36
SRRT-211ENST00000478693 PLPPR4Q7Z2D5 763 aa12.8□□□□□ -0.36
SRRT-211ENST00000478693 FAM126BQ8IXS8 530 aa12.8□□□□□ -0.36
SRRT-211ENST00000478693 BANK1Q8NDB2 785 aa12.8□□□□□ -0.36
SRRT-211ENST00000478693 PCYT2Q99447 389 aa12.8□□□□□ -0.36
SRRT-211ENST00000478693 RAB34Q9BZG1 259 aa12.8□□□□□ -0.36
SRRT-211ENST00000478693 GTF2IRD1Q9UHL9 959 aa12.8□□□□□ -0.36
SRRT-211ENST00000478693 ZMYND8Q9ULU4 1186 aaPredicted RBP12.8□□□□□ -0.36
SRRT-211ENST00000478693 GRIN2DO15399 1336 aa12.8□□□□□ -0.36
SRRT-211ENST00000478693 IGSF9BQ9UPX0 1349 aa12.8□□□□□ -0.36
SRRT-211ENST00000478693 POTEB3A0JP26 581 aa12.79□□□□□ -0.36
SRRT-211ENST00000478693 POTEMA6NI47 508 aa12.79□□□□□ -0.36
SRRT-211ENST00000478693 LAD1O00515 517 aa12.79□□□□□ -0.36
SRRT-211ENST00000478693 B4GALT4O60513 344 aa12.79□□□□□ -0.36
SRRT-211ENST00000478693 DKC1O60832 514 aaKnown RBP eCLIP12.79□□□□□ -0.36
SRRT-211ENST00000478693 F13A1P00488 732 aa12.79□□□□□ -0.36
SRRT-211ENST00000478693 GNAT1P11488 350 aa12.79□□□□□ -0.36
SRRT-211ENST00000478693 SYN1P17600 705 aa12.79□□□□□ -0.36
SRRT-211ENST00000478693 PRKCEQ02156 737 aa12.79□□□□□ -0.36
SRRT-211ENST00000478693 CEBPZQ03701 1054 aaKnown RBP12.79□□□□□ -0.36
SRRT-211ENST00000478693 SF3A1Q15459 793 aaKnown RBP12.79□□□□□ -0.36
SRRT-211ENST00000478693 PTGISQ16647 500 aa12.79□□□□□ -0.36
SRRT-211ENST00000478693 FAM173BQ6P4H8 233 aa12.79□□□□□ -0.36
SRRT-211ENST00000478693 POTEBQ6S5H4 581 aa12.79□□□□□ -0.36
SRRT-211ENST00000478693 ANKRD33Q7Z3H0 272 aa12.79□□□□□ -0.36
SRRT-211ENST00000478693 SLC43A3Q8NBI5 491 aa12.79□□□□□ -0.36
SRRT-211ENST00000478693 ERMNQ8TAM6 284 aa12.79□□□□□ -0.36
SRRT-211ENST00000478693 AFAP1L1Q8TED9 768 aa12.79□□□□□ -0.36
SRRT-211ENST00000478693 FAM167AQ96KS9 214 aa12.79□□□□□ -0.36
SRRT-211ENST00000478693 ZNF396Q96N95 335 aaPredicted RBP12.79□□□□□ -0.36
SRRT-211ENST00000478693 MTMR9Q96QG7 549 aa12.79□□□□□ -0.36
SRRT-211ENST00000478693 TRPV6Q9H1D0 765 aa12.79□□□□□ -0.36
SRRT-211ENST00000478693 TRMT13Q9NUP7 481 aaKnown RBP12.79□□□□□ -0.36
SRRT-211ENST00000478693 TMEM39AQ9NV64 488 aa12.79□□□□□ -0.36
SRRT-211ENST00000478693 IGKV6D-21A0A0A0MT36 114 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 EML1O00423 815 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 OATP04181 439 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 CDK7P50613 346 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 PSMC5P62195 406 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 ATP2C1P98194 919 aaPredicted RBP12.78□□□□□ -0.36
SRRT-211ENST00000478693 CYP4A11Q02928 519 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 PKP1Q13835 747 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 PLCB4Q15147 1175 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 EPHA7Q15375 998 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 GRIK4Q16099 956 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 HAUS3Q68CZ6 603 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 GDF6Q6KF10 455 aaPredicted RBP12.78□□□□□ -0.36
SRRT-211ENST00000478693 DTHD1Q6ZMT9 781 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 SESTD1Q86VW0 696 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 CCDC155Q8N6L0 562 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 NEK9Q8TD19 979 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 DYDC2Q96IM9 177 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 CCDC43Q96MW1 224 aaKnown RBP12.78□□□□□ -0.36
SRRT-211ENST00000478693 TOX2Q96NM4 488 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 PPP1R12CQ9BZL4 782 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 RNPEPQ9H4A4 650 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 PDLIM7Q9NR12 457 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 SETD4Q9NVD3 440 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 SEPT9Q9UHD8 586 aaPredicted RBP12.78□□□□□ -0.36
SRRT-211ENST00000478693 NRCAMQ92823 1304 aa12.78□□□□□ -0.36
SRRT-211ENST00000478693 VWA3AA6NCI4 1184 aa12.77□□□□□ -0.37
SRRT-211ENST00000478693 HBP1O60381 514 aa12.77□□□□□ -0.37
SRRT-211ENST00000478693 P4HBP07237 508 aaKnown RBP12.77□□□□□ -0.37
SRRT-211ENST00000478693 CYP2C9P11712 490 aa12.77□□□□□ -0.37
SRRT-211ENST00000478693 RAG1P15918 1043 aa12.77□□□□□ -0.37
SRRT-211ENST00000478693 PRPHP41219 470 aa12.77□□□□□ -0.37
SRRT-211ENST00000478693 QARSP47897 775 aaKnown RBP12.77□□□□□ -0.37
SRRT-211ENST00000478693 FAAP100Q0VG06 881 aa12.77□□□□□ -0.37
SRRT-211ENST00000478693 UGCGQ16739 394 aa12.77□□□□□ -0.37
SRRT-211ENST00000478693 B3GNT9Q6UX72 402 aa12.77□□□□□ -0.37
SRRT-211ENST00000478693 ATP8B4Q8TF62 1192 aa12.77□□□□□ -0.37
SRRT-211ENST00000478693 LMBR1Q8WVP7 490 aa12.77□□□□□ -0.37
SRRT-211ENST00000478693 BBXQ8WY36 941 aaPredicted RBP12.77□□□□□ -0.37
SRRT-211ENST00000478693 EIF2AK1Q9BQI3 630 aaKnown RBP12.77□□□□□ -0.37
SRRT-211ENST00000478693 LXNQ9BS40 222 aa12.77□□□□□ -0.37
SRRT-211ENST00000478693 FTOQ9C0B1 505 aaKnown RBP eCLIP12.77□□□□□ -0.37
SRRT-211ENST00000478693 HIPK3Q9H422 1215 aa12.77□□□□□ -0.37
SRRT-211ENST00000478693 NRBP2Q9NSY0 501 aa12.77□□□□□ -0.37
SRRT-211ENST00000478693 LRWD1Q9UFC0 647 aa12.77□□□□□ -0.37
SRRT-211ENST00000478693 TUBE1Q9UJT0 475 aa12.77□□□□□ -0.37
SRRT-211ENST00000478693 MAFBQ9Y5Q3 323 aaPredicted RBP12.77□□□□□ -0.37
SRRT-211ENST00000478693 CLIC4Q9Y696 253 aa12.77□□□□□ -0.37
SRRT-211ENST00000478693 CENPFP49454 3210 aa12.76□□□□□ -0.37
SRRT-211ENST00000478693 RRN3P2A6NIE6 340 aa12.76□□□□□ -0.37
SRRT-211ENST00000478693 CD4P01730 458 aa12.76□□□□□ -0.37
SRRT-211ENST00000478693 INSRRP14616 1297 aa12.76□□□□□ -0.37
SRRT-211ENST00000478693 NCLP19338 710 aaKnown RBP12.76□□□□□ -0.37
SRRT-211ENST00000478693 FXR2P51116 673 aaKnown RBP eCLIP12.76□□□□□ -0.37
SRRT-211ENST00000478693 ZNF200P98182 395 aaPredicted RBP12.76□□□□□ -0.37
SRRT-211ENST00000478693 SPIRE1Q08AE8 756 aa12.76□□□□□ -0.37
SRRT-211ENST00000478693 CTTNQ14247 550 aaKnown RBP12.76□□□□□ -0.37
SRRT-211ENST00000478693 STK38Q15208 465 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms