RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 RDM1Q8NG50 284 aa30.22■■■□□ 2.43
CCM2-211ENST00000478582 PCYT2Q99447 389 aa30.22■■■□□ 2.43
CCM2-211ENST00000478582 TRPV6Q9H1D0 765 aa30.22■■■□□ 2.43
CCM2-211ENST00000478582 UNC45AQ9H3U1 944 aa30.22■■■□□ 2.43
CCM2-211ENST00000478582 SMARCAD1Q9H4L7 1026 aa30.22■■■□□ 2.43
CCM2-211ENST00000478582 ZNF215Q9UL58 517 aaPredicted RBP30.22■■■□□ 2.43
CCM2-211ENST00000478582 PCDHA10Q9Y5I2 948 aa30.22■■■□□ 2.43
CCM2-211ENST00000478582 SFNP31947 248 aa30.21■■■□□ 2.43
CCM2-211ENST00000478582 PPP2R5CQ13362 524 aa30.21■■■□□ 2.43
CCM2-211ENST00000478582 KIAA0753Q2KHM9 967 aa30.21■■■□□ 2.43
CCM2-211ENST00000478582 MIS18BP1Q6P0N0 1132 aa30.21■■■□□ 2.43
CCM2-211ENST00000478582 PLPPR4Q7Z2D5 763 aa30.21■■■□□ 2.43
CCM2-211ENST00000478582 SPRYD3Q8NCJ5 442 aa30.21■■■□□ 2.43
CCM2-211ENST00000478582 PPP1R12CQ9BZL4 782 aa30.21■■■□□ 2.43
CCM2-211ENST00000478582 WDR64B1ANS9 1081 aa30.2■■■□□ 2.43
CCM2-211ENST00000478582 MARCH6O60337 910 aa30.2■■■□□ 2.43
CCM2-211ENST00000478582 JAK3P52333 1124 aa30.2■■■□□ 2.43
CCM2-211ENST00000478582 EPHB4P54760 987 aa30.2■■■□□ 2.43
CCM2-211ENST00000478582 TRIM50Q86XT4 487 aa30.2■■■□□ 2.43
CCM2-211ENST00000478582 AFAP1L1Q8TED9 768 aa30.2■■■□□ 2.43
CCM2-211ENST00000478582 TMEM60Q9H2L4 133 aa30.2■■■□□ 2.43
CCM2-211ENST00000478582 AZI2Q9H6S1 392 aa30.2■■■□□ 2.43
CCM2-211ENST00000478582 ERAP1Q9NZ08 941 aa30.2■■■□□ 2.43
CCM2-211ENST00000478582 VAV3Q9UKW4 847 aa30.2■■■□□ 2.43
CCM2-211ENST00000478582 PCDHB6Q9Y5E3 794 aa30.2■■■□□ 2.43
CCM2-211ENST00000478582 PSAPP07602 524 aa30.19■■■□□ 2.42
CCM2-211ENST00000478582 RESTQ13127 1097 aa30.19■■■□□ 2.42
CCM2-211ENST00000478582 FERMT3Q86UX7 667 aa30.19■■■□□ 2.42
CCM2-211ENST00000478582 TMEM199Q8N511 208 aa30.19■■■□□ 2.42
CCM2-211ENST00000478582 C4orf32Q8N8J7 132 aa30.19■■■□□ 2.42
CCM2-211ENST00000478582 GLG1Q92896 1179 aa30.19■■■□□ 2.42
CCM2-211ENST00000478582 EIF4ENIF1Q9NRA8 985 aaKnown RBP30.19■■■□□ 2.42
CCM2-211ENST00000478582 DISC1Q9NRI5 854 aa30.19■■■□□ 2.42
CCM2-211ENST00000478582 LAMA3Q16787 3333 aa30.19■■■□□ 2.42
CCM2-211ENST00000478582 SLC26A2P50443 739 aa30.18■■■□□ 2.42
CCM2-211ENST00000478582 STAT5BP51692 787 aa30.18■■■□□ 2.42
CCM2-211ENST00000478582 NBR1Q14596 966 aa30.18■■■□□ 2.42
CCM2-211ENST00000478582 HIPK3Q9H422 1215 aa30.18■■■□□ 2.42
CCM2-211ENST00000478582 ZSCAN16Q9H4T2 348 aaPredicted RBP30.18■■■□□ 2.42
CCM2-211ENST00000478582 PCDHA12Q9UN75 941 aa30.18■■■□□ 2.42
CCM2-211ENST00000478582 PPIGQ13427 754 aaKnown RBP eCLIP30.17■■■□□ 2.42
CCM2-211ENST00000478582 FAM47CQ5HY64 1035 aa30.17■■■□□ 2.42
CCM2-211ENST00000478582 FAM160B1Q5W0V3 765 aa30.17■■■□□ 2.42
CCM2-211ENST00000478582 MIER3Q7Z3K6 550 aa30.17■■■□□ 2.42
CCM2-211ENST00000478582 CCDC60Q8IWA6 550 aaPredicted RBP30.17■■■□□ 2.42
CCM2-211ENST00000478582 C7orf31Q8N865 590 aa30.17■■■□□ 2.42
CCM2-211ENST00000478582 TRMT13Q9NUP7 481 aaKnown RBP30.17■■■□□ 2.42
CCM2-211ENST00000478582 GTF2IRD1Q9UHL9 959 aa30.17■■■□□ 2.42
CCM2-211ENST00000478582 SAMM50Q9Y512 469 aa30.17■■■□□ 2.42
CCM2-211ENST00000478582 CYP2C18P33260 490 aa30.16■■■□□ 2.42
CCM2-211ENST00000478582 SPIRE1Q08AE8 756 aa30.16■■■□□ 2.42
CCM2-211ENST00000478582 SWSAP1Q6NVH7 229 aa30.16■■■□□ 2.42
CCM2-211ENST00000478582 NOC4LQ9BVI4 516 aaKnown RBP30.16■■■□□ 2.42
CCM2-211ENST00000478582 RNPEPQ9H4A4 650 aa30.16■■■□□ 2.42
CCM2-211ENST00000478582 TTC12Q9H892 705 aaPredicted RBP30.16■■■□□ 2.42
CCM2-211ENST00000478582 ZNF302Q9NR11 478 aa30.16■■■□□ 2.42
CCM2-211ENST00000478582 HDAC6Q9UBN7 1215 aa30.16■■■□□ 2.42
CCM2-211ENST00000478582 MAFBQ9Y5Q3 323 aaPredicted RBP30.16■■■□□ 2.42
CCM2-211ENST00000478582 LAD1O00515 517 aa30.15■■■□□ 2.42
CCM2-211ENST00000478582 BACH1O14867 736 aa30.15■■■□□ 2.42
CCM2-211ENST00000478582 CHMP2AO43633 222 aa30.15■■■□□ 2.42
CCM2-211ENST00000478582 OR52Z1P0C646 297 aa30.15■■■□□ 2.42
CCM2-211ENST00000478582 CSF2RAP15509 400 aa30.15■■■□□ 2.42
CCM2-211ENST00000478582 CHMP4BP1P59074 171 aa30.15■■■□□ 2.42
CCM2-211ENST00000478582 SZT2Q5T011 3432 aa30.15■■■□□ 2.42
CCM2-211ENST00000478582 HOXC8P31273 242 aa30.14■■■□□ 2.42
CCM2-211ENST00000478582 TXKP42681 527 aa30.14■■■□□ 2.42
CCM2-211ENST00000478582 PTGDRQ13258 359 aa30.14■■■□□ 2.42
CCM2-211ENST00000478582 PPP1R13LQ8WUF5 828 aa30.14■■■□□ 2.42
CCM2-211ENST00000478582 EML1O00423 815 aa30.13■■■□□ 2.41
CCM2-211ENST00000478582 SMIM10L2AP0DMW4 78 aa30.13■■■□□ 2.41
CCM2-211ENST00000478582 SMIM10L2BP0DMW5 78 aa30.13■■■□□ 2.41
CCM2-211ENST00000478582 C16orf59Q7L2K0 433 aa30.13■■■□□ 2.41
CCM2-211ENST00000478582 TNPO1Q92973 898 aaKnown RBP30.13■■■□□ 2.41
CCM2-211ENST00000478582 RNPC3Q96LT9 517 aaKnown RBP30.13■■■□□ 2.41
CCM2-211ENST00000478582 GABBR1Q9UBS5 961 aa30.13■■■□□ 2.41
CCM2-211ENST00000478582 UMODL1Q5DID0 1318 aa30.13■■■□□ 2.41
CCM2-211ENST00000478582 ZSCAN22P10073 491 aaPredicted RBP30.12■■■□□ 2.41
CCM2-211ENST00000478582 CYP2C9P11712 490 aa30.12■■■□□ 2.41
CCM2-211ENST00000478582 PLCB4Q15147 1175 aa30.12■■■□□ 2.41
CCM2-211ENST00000478582 EPHA7Q15375 998 aa30.12■■■□□ 2.41
CCM2-211ENST00000478582 GDF6Q6KF10 455 aaPredicted RBP30.12■■■□□ 2.41
CCM2-211ENST00000478582 PDXDC2PQ6P474 469 aa30.12■■■□□ 2.41
CCM2-211ENST00000478582 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.12■■■□□ 2.41
CCM2-211ENST00000478582 IGSF9BQ9UPX0 1349 aa30.12■■■□□ 2.41
CCM2-211ENST00000478582 ATP4AP20648 1035 aa30.11■■■□□ 2.41
CCM2-211ENST00000478582 MARK3P27448 753 aa30.11■■■□□ 2.41
CCM2-211ENST00000478582 PRPHP41219 470 aa30.11■■■□□ 2.41
CCM2-211ENST00000478582 TMEM240Q5SV17 173 aa30.11■■■□□ 2.41
CCM2-211ENST00000478582 IL23AQ9NPF7 189 aa30.11■■■□□ 2.41
CCM2-211ENST00000478582 NRCAMQ92823 1304 aa30.11■■■□□ 2.41
CCM2-211ENST00000478582 CCL23P55773 120 aa30.1■■■□□ 2.41
CCM2-211ENST00000478582 ADAM17P78536 824 aa30.1■■■□□ 2.41
CCM2-211ENST00000478582 ATP2C1P98194 919 aaPredicted RBP30.1■■■□□ 2.41
CCM2-211ENST00000478582 PTGISQ16647 500 aa30.1■■■□□ 2.41
CCM2-211ENST00000478582 ATP8B4Q8TF62 1192 aa30.1■■■□□ 2.41
CCM2-211ENST00000478582 WNT8AQ9H1J5 351 aa30.1■■■□□ 2.41
CCM2-211ENST00000478582 POTEB3A0JP26 581 aa30.09■■■□□ 2.41
CCM2-211ENST00000478582 C17orf102A2RUQ5 167 aa30.09■■■□□ 2.41
CCM2-211ENST00000478582 BMP15O95972 392 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms