RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 UNCXA6NJT0 531 aa5.47□□□□□ -1.53
HPS3-205ENST00000478525 PLSCR1O15162 318 aa5.47□□□□□ -1.53
HPS3-205ENST00000478525 NARSO43776 548 aaKnown RBP5.47□□□□□ -1.53
HPS3-205ENST00000478525 ACO1P21399 889 aaKnown RBP5.47□□□□□ -1.53
HPS3-205ENST00000478525 POLD1P28340 1107 aa5.47□□□□□ -1.53
HPS3-205ENST00000478525 RRADP55042 308 aa5.47□□□□□ -1.53
HPS3-205ENST00000478525 TOP3AQ13472 1001 aaPredicted RBP5.47□□□□□ -1.53
HPS3-205ENST00000478525 DCAF4Q8WV16 495 aa5.47□□□□□ -1.53
HPS3-205ENST00000478525 CHFRQ96EP1 664 aa5.47□□□□□ -1.53
HPS3-205ENST00000478525 DPYSL5Q9BPU6 564 aa5.47□□□□□ -1.53
HPS3-205ENST00000478525 ZNF408Q9H9D4 720 aa5.47□□□□□ -1.53
HPS3-205ENST00000478525 C11orf21Q9P2W6 132 aa5.47□□□□□ -1.53
HPS3-205ENST00000478525 SLC30A1Q9Y6M5 507 aa5.47□□□□□ -1.53
HPS3-205ENST00000478525 ESYT3A0FGR9 886 aa5.46□□□□□ -1.54
HPS3-205ENST00000478525 MATN2O00339 956 aa5.46□□□□□ -1.54
HPS3-205ENST00000478525 CUTAO60888 179 aa5.46□□□□□ -1.54
HPS3-205ENST00000478525 SOD2P04179 222 aa5.46□□□□□ -1.54
HPS3-205ENST00000478525 CR2P20023 1033 aa5.46□□□□□ -1.54
HPS3-205ENST00000478525 DUSP8Q13202 625 aa5.46□□□□□ -1.54
HPS3-205ENST00000478525 NOLC1Q14978 699 aaKnown RBP eCLIP5.46□□□□□ -1.54
HPS3-205ENST00000478525 LSM12Q3MHD2 195 aaKnown RBP5.46□□□□□ -1.54
HPS3-205ENST00000478525 POLNQ7Z5Q5 900 aa5.46□□□□□ -1.54
HPS3-205ENST00000478525 OR14A2Q96R54 314 aa5.46□□□□□ -1.54
HPS3-205ENST00000478525 AARSD1Q9BTE6 412 aaKnown RBP5.46□□□□□ -1.54
HPS3-205ENST00000478525 BLACEA4D250 179 aa5.45□□□□□ -1.54
HPS3-205ENST00000478525 CDC14BO60729 498 aa5.45□□□□□ -1.54
HPS3-205ENST00000478525 FGRP09769 529 aa5.45□□□□□ -1.54
HPS3-205ENST00000478525 C1SP09871 688 aa5.45□□□□□ -1.54
HPS3-205ENST00000478525 GPR85P60893 370 aa5.45□□□□□ -1.54
HPS3-205ENST00000478525 DBPQ10586 325 aaPredicted RBP5.45□□□□□ -1.54
HPS3-205ENST00000478525 HSP90AA2PQ14568 343 aaPredicted RBP5.45□□□□□ -1.54
HPS3-205ENST00000478525 SMN1Q16637 294 aaKnown RBP5.45□□□□□ -1.54
HPS3-205ENST00000478525 VPS37DQ86XT2 251 aa5.45□□□□□ -1.54
HPS3-205ENST00000478525 AMER2Q8N7J2 671 aa5.45□□□□□ -1.54
HPS3-205ENST00000478525 CELF2-AS1Q8N7Q2 184 aa5.45□□□□□ -1.54
HPS3-205ENST00000478525 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.45□□□□□ -1.54
HPS3-205ENST00000478525 SH3RF2Q8TEC5 729 aa5.45□□□□□ -1.54
HPS3-205ENST00000478525 OSBP2Q969R2 916 aa5.45□□□□□ -1.54
HPS3-205ENST00000478525 ZFYVE21Q9BQ24 234 aa5.45□□□□□ -1.54
HPS3-205ENST00000478525 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.45□□□□□ -1.54
HPS3-205ENST00000478525 TRIM8Q9BZR9 551 aa5.45□□□□□ -1.54
HPS3-205ENST00000478525 IPPKQ9H8X2 491 aa5.45□□□□□ -1.54
HPS3-205ENST00000478525 ARHGEF4Q9NR80 690 aa5.45□□□□□ -1.54
HPS3-205ENST00000478525 WDR33Q9C0J8 1336 aaKnown RBP5.45□□□□□ -1.54
HPS3-205ENST00000478525 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.44□□□□□ -1.54
HPS3-205ENST00000478525 TCRBV5S4A2TA0A5A2 114 aa5.44□□□□□ -1.54
HPS3-205ENST00000478525 PRODHO43272 600 aa5.44□□□□□ -1.54
HPS3-205ENST00000478525 ETV4P43268 484 aa5.44□□□□□ -1.54
HPS3-205ENST00000478525 INHBEP58166 350 aa5.44□□□□□ -1.54
HPS3-205ENST00000478525 TBR1Q16650 682 aa5.44□□□□□ -1.54
HPS3-205ENST00000478525 ZMAT1Q5H9K5 638 aa5.44□□□□□ -1.54
HPS3-205ENST00000478525 STYK1Q6J9G0 422 aa5.44□□□□□ -1.54
HPS3-205ENST00000478525 MAMDC4Q6UXC1 1216 aa5.44□□□□□ -1.54
HPS3-205ENST00000478525 C1orf210Q8IVY1 113 aa5.44□□□□□ -1.54
HPS3-205ENST00000478525 IFNL3Q8IZI9 196 aa5.44□□□□□ -1.54
HPS3-205ENST00000478525 IL17DQ8TAD2 202 aa5.44□□□□□ -1.54
HPS3-205ENST00000478525 HNRNPLLQ8WVV9 542 aaKnown RBP5.44□□□□□ -1.54
HPS3-205ENST00000478525 PLA2G12BQ9BX93 195 aa5.44□□□□□ -1.54
HPS3-205ENST00000478525 IKZF4Q9H2S9 585 aa5.44□□□□□ -1.54
HPS3-205ENST00000478525 ST7Q9NRC1 585 aa5.44□□□□□ -1.54
HPS3-205ENST00000478525 NR2E1Q9Y466 385 aa5.44□□□□□ -1.54
HPS3-205ENST00000478525 ASXL2Q76L83 1435 aa5.43□□□□□ -1.54
HPS3-205ENST00000478525 FAM47E-STBD1D6RA91 191 aa5.43□□□□□ -1.54
HPS3-205ENST00000478525 FGFR1P11362 822 aa5.43□□□□□ -1.54
HPS3-205ENST00000478525 PABPC1P11940 636 aaKnown RBP5.43□□□□□ -1.54
HPS3-205ENST00000478525 MCM7P33993 719 aa5.43□□□□□ -1.54
HPS3-205ENST00000478525 ZNF808Q8N4W9 903 aaPredicted RBP5.43□□□□□ -1.54
HPS3-205ENST00000478525 CACTINQ8WUQ7 758 aaKnown RBP5.43□□□□□ -1.54
HPS3-205ENST00000478525 SGSM3Q96HU1 749 aa5.43□□□□□ -1.54
HPS3-205ENST00000478525 KIAA1683Q9H0B3 1180 aa5.43□□□□□ -1.54
HPS3-205ENST00000478525 TGM1P22735 817 aa5.42□□□□□ -1.54
HPS3-205ENST00000478525 ACRV1P26436 265 aa5.42□□□□□ -1.54
HPS3-205ENST00000478525 DPTQ07507 201 aa5.42□□□□□ -1.54
HPS3-205ENST00000478525 DDR2Q16832 855 aa5.42□□□□□ -1.54
HPS3-205ENST00000478525 WDR72Q3MJ13 1102 aa5.42□□□□□ -1.54
HPS3-205ENST00000478525 YOD1Q5VVQ6 348 aaPredicted RBP5.42□□□□□ -1.54
HPS3-205ENST00000478525 BTBD8Q5XKL5 378 aa5.42□□□□□ -1.54
HPS3-205ENST00000478525 CFHR4Q92496 578 aa5.42□□□□□ -1.54
HPS3-205ENST00000478525 FAM89AQ96GI7 184 aa5.42□□□□□ -1.54
HPS3-205ENST00000478525 PLEKHG4BQ96PX9 1271 aa5.42□□□□□ -1.54
HPS3-205ENST00000478525 CEP89Q96ST8 783 aa5.42□□□□□ -1.54
HPS3-205ENST00000478525 SRPK3Q9UPE1 567 aa5.42□□□□□ -1.54
HPS3-205ENST00000478525 FAM90A27PA6NNH2 459 aa5.41□□□□□ -1.54
HPS3-205ENST00000478525 ARHGAP6O43182 974 aa5.41□□□□□ -1.54
HPS3-205ENST00000478525 PTPN1P18031 435 aaKnown RBP5.41□□□□□ -1.54
HPS3-205ENST00000478525 ERCC5P28715 1186 aaPredicted RBP5.41□□□□□ -1.54
HPS3-205ENST00000478525 ADCY8P40145 1251 aa5.41□□□□□ -1.54
HPS3-205ENST00000478525 IL13RA1P78552 427 aa5.41□□□□□ -1.54
HPS3-205ENST00000478525 PURAQ00577 322 aaKnown RBP5.41□□□□□ -1.54
HPS3-205ENST00000478525 NFYCQ13952 458 aa5.41□□□□□ -1.54
HPS3-205ENST00000478525 DPP8Q6V1X1 898 aaPredicted RBP5.41□□□□□ -1.54
HPS3-205ENST00000478525 NSMFQ6X4W1 530 aa5.41□□□□□ -1.54
HPS3-205ENST00000478525 LARP4Q71RC2 724 aaKnown RBP eCLIP5.41□□□□□ -1.54
HPS3-205ENST00000478525 MCF2L2Q86YR7 1114 aa5.41□□□□□ -1.54
HPS3-205ENST00000478525 NEU4Q8WWR8 484 aaPredicted RBP5.41□□□□□ -1.54
HPS3-205ENST00000478525 SCYL1Q96KG9 808 aa5.41□□□□□ -1.54
HPS3-205ENST00000478525 ALG1Q9BT22 464 aa5.41□□□□□ -1.54
HPS3-205ENST00000478525 ZDHHC5Q9C0B5 715 aa5.41□□□□□ -1.54
HPS3-205ENST00000478525 C12orf65Q9H3J6 166 aaKnown RBP5.41□□□□□ -1.54
HPS3-205ENST00000478525 WDR26Q9H7D7 661 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms