RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	TMEM260	Q9NX78	707 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	PCDHA6	Q9UN73	950 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	PCDHA8	Q9Y5H6	950 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	MYH9	P35579	1960 aa	Known RBP	4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	EYS	Q5T1H1	3165 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	IGKV6D-21	A0A0A0MT36	114 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	DDX11L8	A8MPP1	907 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	LGR5	O75473	907 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	TGFB3	P10600	412 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	TRAF1	Q13077	416 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	ITGB3BP	Q13352	177 aa	Predicted RBP	4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	NBPF20	Q3BBV1	942 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	GDF6	Q6KF10	455 aa	Predicted RBP	4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	TDH	Q8IZJ6	230 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	PPP1R13L	Q8WUF5	828 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	PIBF1	Q8WXW3	757 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	PHKB	Q93100	1093 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	GPRASP2	Q96D09	838 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	SENP7	Q9BQF6	1050 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	UPF3B	Q9BZI7	483 aa	Known RBP	4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	JADE2	Q9NQC1	790 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	MROH7	Q68CQ1	1323 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	TRIOBP	Q9H2D6	2365 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	GSTTP1	A0A1W2PQM5	241 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	FAM86B1	E9PN63	330 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	FIBP	O43427	364 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	KPNA6	O60684	536 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	PQBP1	O60828	265 aa	Known RBP	4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	NFASC	O94856	1347 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	ATG7	O95352	703 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	ADH1B	P00325	375 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	FAM86B2	P0C5J1	330 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	PSMA5	P28066	241 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	CIITA	P33076	1130 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	RBM25	P49756	843 aa	Known RBP	4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	AK2	P54819	239 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	MBTPS1	Q14703	1052 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	MFSD5	Q6N075	450 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	SEPT14	Q6ZU15	432 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	NIPA1	Q7RTP0	329 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	CYP2W1	Q8TAV3	490 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	PGBD1	Q96JS3	809 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	GLT1D1	Q96MS3	346 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	ANO3	Q9BYT9	981 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	AP5M1	Q9H0R1	490 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	PSTPIP2	Q9H939	334 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	TRMT13	Q9NUP7	481 aa	Known RBP	4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	GTF2IRD1	Q9UHL9	959 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	EMSY	Q7Z589	1322 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	TNFRSF10A	O00220	468 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	MEIS1	O00470	390 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	DHX16	O60231	1041 aa	Known RBP	4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	GGPS1	O95749	300 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	ZNF286B	P0CG31	522 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	AP3B2	Q13367	1082 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	LAMC2	Q13753	1193 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	SHH	Q15465	462 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	TMEM240	Q5SV17	173 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	KCNV1	Q6PIU1	500 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	METTL7B	Q6UX53	244 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	HEATR3	Q7Z4Q2	680 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	FCHSD1	Q86WN1	690 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	FAM177A1	Q8N128	213 aa	Predicted RBP	4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	AIFM3	Q96NN9	605 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	MXRA8	Q9BRK3	442 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	OSBPL7	Q9BZF2	842 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	AGO4	Q9HCK5	861 aa	Known RBP	4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	SH3GLB2	Q9NR46	395 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	CYP46A1	Q9Y6A2	500 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	COL6A3	P12111	3177 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	CCNE2	O96020	404 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	CXCL10	P02778	98 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	LGALS2	P05162	132 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	MYL3	P08590	195 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	AR	P10275	920 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	MYCL	P12524	364 aa	Predicted RBP	4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	SSTR3	P32745	418 aa	Predicted RBP	4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	ADCY7	P51828	1080 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	MGAT3	Q09327	533 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	ME3	Q16798	604 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	MARCH8	Q5T0T0	291 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	CCDC82	Q8N4S0	544 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	RDH13	Q8NBN7	331 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	CUL5	Q93034	780 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	GTF3C6	Q969F1	213 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	PHF20	Q9BVI0	1012 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	PDRG1	Q9NUG6	133 aa		4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	SEC63	Q9UGP8	760 aa	Known RBP	4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.86	□□□□□ -1.63
POLR2B-208	ENST00000478188	KAT6A	Q92794	2004 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	SMCO2	A6NFE2	343 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	ZBTB42	B2RXF5	422 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	CYP3A7	P24462	503 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	CYP2C18	P33260	490 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	EARS2	Q5JPH6	523 aa	Known RBP	4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	ZNF787	Q6DD87	383 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	ZNF598	Q86UK7	904 aa	Known RBP	4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	NSUN7	Q8NE18	718 aa	Known RBP	4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	SMARCC2	Q8TAQ2	1214 aa		4.85	□□□□□ -1.63

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