RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 GLG1Q92896 1179 aa11.62□□□□□ -0.55
HDAC6-222ENST00000478095 SLC5A5Q92911 643 aa11.62□□□□□ -0.55
HDAC6-222ENST00000478095 PCYT2Q99447 389 aa11.62□□□□□ -0.55
HDAC6-222ENST00000478095 TEKT3Q9BXF9 490 aa11.62□□□□□ -0.55
HDAC6-222ENST00000478095 PPP1R12CQ9BZL4 782 aa11.62□□□□□ -0.55
HDAC6-222ENST00000478095 TBC1D22BQ9NU19 505 aa11.62□□□□□ -0.55
HDAC6-222ENST00000478095 TCEAL9Q9UHQ7 104 aa11.62□□□□□ -0.55
HDAC6-222ENST00000478095 ZNF215Q9UL58 517 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-222ENST00000478095 NOD1Q9Y239 953 aa11.62□□□□□ -0.55
HDAC6-222ENST00000478095 BACH1O14867 736 aa11.61□□□□□ -0.55
HDAC6-222ENST00000478095 MARCH6O60337 910 aa11.61□□□□□ -0.55
HDAC6-222ENST00000478095 SUPT20HL2P0C7V6 817 aa11.61□□□□□ -0.55
HDAC6-222ENST00000478095 SMIM10L2AP0DMW4 78 aa11.61□□□□□ -0.55
HDAC6-222ENST00000478095 SMIM10L2BP0DMW5 78 aa11.61□□□□□ -0.55
HDAC6-222ENST00000478095 ITGB8P26012 769 aa11.61□□□□□ -0.55
HDAC6-222ENST00000478095 ZNF200P98182 395 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-222ENST00000478095 KRT76Q01546 638 aa11.61□□□□□ -0.55
HDAC6-222ENST00000478095 HIC1Q14526 733 aa11.61□□□□□ -0.55
HDAC6-222ENST00000478095 PTGISQ16647 500 aa11.61□□□□□ -0.55
HDAC6-222ENST00000478095 LARP1BQ659C4 914 aaKnown RBP11.61□□□□□ -0.55
HDAC6-222ENST00000478095 CCDC60Q8IWA6 550 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-222ENST00000478095 RIT2Q99578 217 aa11.61□□□□□ -0.55
HDAC6-222ENST00000478095 NAP1L4Q99733 375 aaKnown RBP11.61□□□□□ -0.55
HDAC6-222ENST00000478095 UNC45AQ9H3U1 944 aa11.61□□□□□ -0.55
HDAC6-222ENST00000478095 RNPEPQ9H4A4 650 aa11.61□□□□□ -0.55
HDAC6-222ENST00000478095 AZI2Q9H6S1 392 aa11.61□□□□□ -0.55
HDAC6-222ENST00000478095 GTF2IRD1Q9UHL9 959 aa11.61□□□□□ -0.55
HDAC6-222ENST00000478095 TBX21Q9UL17 535 aa11.61□□□□□ -0.55
HDAC6-222ENST00000478095 SAMM50Q9Y512 469 aa11.61□□□□□ -0.55
HDAC6-222ENST00000478095 DNAH12Q6ZR08 3092 aa11.61□□□□□ -0.55
HDAC6-222ENST00000478095 UMODL1Q5DID0 1318 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 EMSYQ7Z589 1322 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 KIAA1217Q5T5P2 1943 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 VPS37CA5D8V6 355 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-222ENST00000478095 RBAK-RBAKDNI3L0D1 243 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 NEMFO60524 1076 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 LGR5O75473 907 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 PSMD10O75832 226 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 RAG1P15918 1043 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 MCM7P33993 719 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 MAGEA10P43363 369 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-222ENST00000478095 STAT5BP51692 787 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 PTPN11Q06124 597 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-222ENST00000478095 NBR1Q14596 966 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 ZNF746Q6NUN9 644 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-222ENST00000478095 SWSAP1Q6NVH7 229 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 MIS18BP1Q6P0N0 1132 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 ABHD15Q6UXT9 468 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 TRMT1LQ7Z2T5 733 aaKnown RBP11.6□□□□□ -0.55
HDAC6-222ENST00000478095 SESTD1Q86VW0 696 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 HAS1Q92839 578 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 BADQ92934 168 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 CTAGE1Q96RT6 745 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 SEZ6LQ9BYH1 1024 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 SMARCAD1Q9H4L7 1026 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 KCNMB3Q9NPA1 279 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 SETD4Q9NVD3 440 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 ERAP1Q9NZ08 941 aa11.6□□□□□ -0.55
HDAC6-222ENST00000478095 C17orf102A2RUQ5 167 aa11.59□□□□□ -0.55
HDAC6-222ENST00000478095 WDR64B1ANS9 1081 aa11.59□□□□□ -0.55
HDAC6-222ENST00000478095 KIAA0355O15063 1070 aa11.59□□□□□ -0.55
HDAC6-222ENST00000478095 ATG7O95352 703 aa11.59□□□□□ -0.55
HDAC6-222ENST00000478095 PSAPP07602 524 aa11.59□□□□□ -0.55
HDAC6-222ENST00000478095 U2AF2P26368 475 aaKnown RBP eCLIP11.59□□□□□ -0.551e-7■■□□□ 14.2
HDAC6-222ENST00000478095 CYP2C18P33260 490 aa11.59□□□□□ -0.55
HDAC6-222ENST00000478095 CCL23P55773 120 aa11.59□□□□□ -0.55
HDAC6-222ENST00000478095 ZNF174Q15697 407 aa11.59□□□□□ -0.55
HDAC6-222ENST00000478095 CALCRLQ16602 461 aa11.59□□□□□ -0.55
HDAC6-222ENST00000478095 TTC38Q5R3I4 469 aa11.59□□□□□ -0.55
HDAC6-222ENST00000478095 SMAP1Q8IYB5 467 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-222ENST00000478095 SPRYD3Q8NCJ5 442 aa11.59□□□□□ -0.55
HDAC6-222ENST00000478095 ZBTB10Q96DT7 871 aa11.59□□□□□ -0.55
HDAC6-222ENST00000478095 INTS4Q96HW7 963 aaKnown RBP11.59□□□□□ -0.55
HDAC6-222ENST00000478095 LBHD1Q9BQE6 289 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-222ENST00000478095 TMEM60Q9H2L4 133 aa11.59□□□□□ -0.55
HDAC6-222ENST00000478095 HIPK3Q9H422 1215 aa11.59□□□□□ -0.55
HDAC6-222ENST00000478095 ZNF302Q9NR11 478 aa11.59□□□□□ -0.55
HDAC6-222ENST00000478095 DISC1Q9NRI5 854 aa11.59□□□□□ -0.55
HDAC6-222ENST00000478095 GABBR1Q9UBS5 961 aa11.59□□□□□ -0.55
HDAC6-222ENST00000478095 VAV3Q9UKW4 847 aa11.59□□□□□ -0.55
HDAC6-222ENST00000478095 NOL7Q9UMY1 257 aaKnown RBP11.59□□□□□ -0.55
HDAC6-222ENST00000478095 PCDHA10Q9Y5I2 948 aa11.59□□□□□ -0.55
HDAC6-222ENST00000478095 ALPK3Q96L96 1907 aa11.58□□□□□ -0.55
HDAC6-222ENST00000478095 IGKV6D-21A0A0A0MT36 114 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 EML1O00423 815 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 TREHO43280 583 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 HSP90AA1P07900 732 aaKnown RBP11.58□□□□□ -0.56
HDAC6-222ENST00000478095 JAK3P52333 1124 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 IGBP1P78318 339 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 PPFIA1Q13136 1202 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 PLCB4Q15147 1175 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 GRIK4Q16099 956 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 UGCGQ16739 394 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 FAM160B1Q5W0V3 765 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 NCAPH2Q6IBW4 605 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 PDXDC2PQ6P474 469 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 PLPPR4Q7Z2D5 763 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 MIER3Q7Z3K6 550 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 FERMT3Q86UX7 667 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 CKAP2LQ8IYA6 745 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms