RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 LZICQ8WZA0 190 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 VTI1AQ96AJ9 217 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 VMP1Q96GC9 406 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 CDHR1Q96JP9 859 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 RUFY1Q96T51 708 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 FSD1Q9BTV5 496 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 LRRC27Q9C0I9 530 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 KATNBL1Q9H079 304 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 TMX1Q9H3N1 280 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 HOMER2Q9NSB8 354 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 FAM53CQ9NYF3 392 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 CHMP5Q9NZZ3 219 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.58□□□□□ -1.36
TRA2B-211ENST00000477939 FEM1BQ9UK73 627 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.58□□□□□ -1.36
TRA2B-211ENST00000477939 ARIH1Q9Y4X5 557 aaPredicted RBP6.58□□□□□ -1.36
TRA2B-211ENST00000477939 TACC3Q9Y6A5 838 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 TTC28Q96AY4 2481 aa6.58□□□□□ -1.36
TRA2B-211ENST00000477939 ASTN1O14525 1302 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 ZNF536O15090 1300 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 KIAA0355O15063 1070 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 ATP8B1O43520 1251 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 NMT2O60551 498 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 DUSP11O75319 330 aaKnown RBP6.57□□□□□ -1.36
TRA2B-211ENST00000477939 TSPY3P0CV98 308 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 TSPY8P0CW00 308 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 BMP3P12645 472 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 ZFXP17010 805 aaPredicted RBP6.57□□□□□ -1.36
TRA2B-211ENST00000477939 CST5P28325 142 aaPredicted RBP6.57□□□□□ -1.36
TRA2B-211ENST00000477939 ERCC5P28715 1186 aaPredicted RBP6.57□□□□□ -1.36
TRA2B-211ENST00000477939 SLC4A3P48751 1232 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 NEK2P51955 445 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 STAT2P52630 851 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 MRPL12P52815 198 aaKnown RBP6.57□□□□□ -1.36
TRA2B-211ENST00000477939 ACLYP53396 1101 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 OAZ1P54368 228 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 POU5F1BQ06416 359 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 FAAP100Q0VG06 881 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 PDAP1Q13442 181 aaKnown RBP6.57□□□□□ -1.36
TRA2B-211ENST00000477939 ACVR2BQ13705 512 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 PKN1Q16512 942 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 CLPPQ16740 277 aaPredicted RBP6.57□□□□□ -1.36
TRA2B-211ENST00000477939 RRP12Q5JTH9 1297 aaKnown RBP6.57□□□□□ -1.36
TRA2B-211ENST00000477939 ZNF697Q5TEC3 545 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 VPS53Q5VIR6 699 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 SFMBT2Q5VUG0 894 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 SLFN13Q68D06 897 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 SYT10Q6XYQ8 523 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 ARMCX2Q7L311 632 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 ANKRD33Q7Z3H0 272 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 NOP9Q86U38 636 aaKnown RBP6.57□□□□□ -1.36
TRA2B-211ENST00000477939 APLFQ8IW19 511 aaPredicted RBP6.57□□□□□ -1.36
TRA2B-211ENST00000477939 ARL6IP6Q8N6S5 226 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 KLHDC9Q8NEP7 349 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 CHST13Q8NET6 341 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 ZNF397Q8NF99 534 aaPredicted RBP6.57□□□□□ -1.36
TRA2B-211ENST00000477939 GABPB2Q8TAK5 448 aaPredicted RBP6.57□□□□□ -1.36
TRA2B-211ENST00000477939 EXOC4Q96A65 974 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 NACC2Q96BF6 587 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 CENPTQ96BT3 561 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 GMCL1Q96IK5 515 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 RNPC3Q96LT9 517 aaKnown RBP6.57□□□□□ -1.36
TRA2B-211ENST00000477939 RPS6KC1Q96S38 1066 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 MAP3K14Q99558 947 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 TSEN34Q9BSV6 310 aaKnown RBP6.57□□□□□ -1.36
TRA2B-211ENST00000477939 NACAP1Q9BZK3 213 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 NAPBQ9H115 298 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 TTYH1Q9H313 450 aaPredicted RBP6.57□□□□□ -1.36
TRA2B-211ENST00000477939 ZNF287Q9HBT7 754 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 STARD7Q9NQZ5 370 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 IL17RBQ9NRM6 502 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.57□□□□□ -1.36
TRA2B-211ENST00000477939 GABBR1Q9UBS5 961 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 TBX21Q9UL17 535 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 FAM184BQ9ULE4 1060 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.57□□□□□ -1.36
TRA2B-211ENST00000477939 LAMA4Q16363 1823 aa6.57□□□□□ -1.36
TRA2B-211ENST00000477939 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.56□□□□□ -1.36
TRA2B-211ENST00000477939 MOXD2PA6NHM9 499 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.56□□□□□ -1.36
TRA2B-211ENST00000477939 TMEM232C9JQI7 657 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 SLC27A2O14975 620 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 HOXA2O43364 376 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 C6orf222P0C671 652 aaPredicted RBP6.56□□□□□ -1.36
TRA2B-211ENST00000477939 RAG1P15918 1043 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 PTGS1P23219 599 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 CHMLP26374 656 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 PIK3CAP42336 1068 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 SLC1A4P43007 532 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 VASPP50552 380 aaPredicted RBP6.56□□□□□ -1.36
TRA2B-211ENST00000477939 RRP1P56182 461 aaKnown RBP6.56□□□□□ -1.36
TRA2B-211ENST00000477939 SMAD3P84022 425 aaKnown RBP6.56□□□□□ -1.36
TRA2B-211ENST00000477939 SLC7A5Q01650 507 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 TFAP4Q01664 338 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 CNTN2Q02246 1040 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 CTDSPL2Q05D32 466 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 FAM160A1Q05DH4 1040 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 PDE4BQ07343 736 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 TBC1D8BQ0IIM8 1120 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 COX10Q12887 443 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms