RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 THPOP40225 353 aa20.04■□□□□ 0.8
PTPN7-209ENST00000477554 IGBP1P78318 339 aa20.04■□□□□ 0.8
PTPN7-209ENST00000477554 RBL2Q08999 1139 aa20.04■□□□□ 0.8
PTPN7-209ENST00000477554 NR5A1Q13285 461 aa20.04■□□□□ 0.8
PTPN7-209ENST00000477554 BFSP2Q13515 415 aa20.04■□□□□ 0.8
PTPN7-209ENST00000477554 INF2Q27J81 1249 aa20.04■□□□□ 0.8
PTPN7-209ENST00000477554 ABHD15Q6UXT9 468 aa20.04■□□□□ 0.8
PTPN7-209ENST00000477554 CCDC83Q8IWF9 413 aa20.04■□□□□ 0.8
PTPN7-209ENST00000477554 RETREG2Q8NC44 543 aa20.04■□□□□ 0.8
PTPN7-209ENST00000477554 GUCD1Q96NT3 240 aa20.04■□□□□ 0.8
PTPN7-209ENST00000477554 ZNF577Q9BSK1 485 aa20.04■□□□□ 0.8
PTPN7-209ENST00000477554 MTMR10Q9NXD2 777 aa20.04■□□□□ 0.8
PTPN7-209ENST00000477554 EMSYQ7Z589 1322 aa20.03■□□□□ 0.8
PTPN7-209ENST00000477554 WNT7AO00755 349 aa20.03■□□□□ 0.8
PTPN7-209ENST00000477554 SLC37A4O43826 429 aa20.03■□□□□ 0.8
PTPN7-209ENST00000477554 CDKL5O76039 1030 aa20.03■□□□□ 0.8
PTPN7-209ENST00000477554 PLCB4Q15147 1175 aa20.03■□□□□ 0.8
PTPN7-209ENST00000477554 CAGE1Q8TC20 777 aa20.03■□□□□ 0.8
PTPN7-209ENST00000477554 PBX4Q9BYU1 374 aa20.03■□□□□ 0.8
PTPN7-209ENST00000477554 ZNF215Q9UL58 517 aaPredicted RBP20.03■□□□□ 0.8
PTPN7-209ENST00000477554 KAT6AQ92794 2004 aa20.03■□□□□ 0.8
PTPN7-209ENST00000477554 IGKV6D-21A0A0A0MT36 114 aa20.02■□□□□ 0.8
PTPN7-209ENST00000477554 ZBBXA8MT70 800 aa20.02■□□□□ 0.8
PTPN7-209ENST00000477554 SMAD3P84022 425 aaKnown RBP20.02■□□□□ 0.8
PTPN7-209ENST00000477554 PPFIA1Q13136 1202 aa20.02■□□□□ 0.8
PTPN7-209ENST00000477554 BECN1Q14457 450 aa20.02■□□□□ 0.8
PTPN7-209ENST00000477554 GRIK4Q16099 956 aa20.02■□□□□ 0.8
PTPN7-209ENST00000477554 HSCBQ8IWL3 235 aa20.02■□□□□ 0.8
PTPN7-209ENST00000477554 AFAP1L1Q8TED9 768 aa20.02■□□□□ 0.8
PTPN7-209ENST00000477554 TNFRSF25Q93038 417 aa20.02■□□□□ 0.8
PTPN7-209ENST00000477554 ERAP1Q9NZ08 941 aa20.02■□□□□ 0.8
PTPN7-209ENST00000477554 YBX2Q9Y2T7 364 aaKnown RBP20.02■□□□□ 0.8
PTPN7-209ENST00000477554 PRUNE2Q8WUY3 3088 aa20.02■□□□□ 0.8
PTPN7-209ENST00000477554 INSRRP14616 1297 aa20.02■□□□□ 0.79
PTPN7-209ENST00000477554 TRMT1LQ7Z2T5 733 aaKnown RBP20.02■□□□□ 0.79
PTPN7-209ENST00000477554 FTOQ9C0B1 505 aaKnown RBP eCLIP20.02■□□□□ 0.79
PTPN7-209ENST00000477554 SMARCAD1Q9H4L7 1026 aa20.02■□□□□ 0.79
PTPN7-209ENST00000477554 LIMCH1Q9UPQ0 1083 aa20.02■□□□□ 0.79
PTPN7-209ENST00000477554 ARHGEF15O94989 841 aa20.01■□□□□ 0.79
PTPN7-209ENST00000477554 DNAJB2P25686 324 aa20.01■□□□□ 0.79
PTPN7-209ENST00000477554 STAT5BP51692 787 aa20.01■□□□□ 0.79
PTPN7-209ENST00000477554 GUCY1B3Q02153 619 aa20.01■□□□□ 0.79
PTPN7-209ENST00000477554 SWSAP1Q6NVH7 229 aa20.01■□□□□ 0.79
PTPN7-209ENST00000477554 PIK3AP1Q6ZUJ8 805 aa20.01■□□□□ 0.79
PTPN7-209ENST00000477554 RPUSD2Q8IZ73 545 aaKnown RBP20.01■□□□□ 0.79
PTPN7-209ENST00000477554 REV3LO60673 3130 aa20■□□□□ 0.79
PTPN7-209ENST00000477554 HSFX4A0A1B0GTS1 333 aaPredicted RBP20■□□□□ 0.79
PTPN7-209ENST00000477554 HSFX3A0A1B0GWH4 333 aaPredicted RBP20■□□□□ 0.79
PTPN7-209ENST00000477554 ZBTB42B2RXF5 422 aa20■□□□□ 0.79
PTPN7-209ENST00000477554 CHMP2AO43633 222 aa20■□□□□ 0.79
PTPN7-209ENST00000477554 CXCL10P02778 98 aa20■□□□□ 0.79
PTPN7-209ENST00000477554 USP11P51784 963 aa20■□□□□ 0.79
PTPN7-209ENST00000477554 DEFB103AP81534 67 aa20■□□□□ 0.79
PTPN7-209ENST00000477554 SETQ01105 290 aaPredicted RBP20■□□□□ 0.79
PTPN7-209ENST00000477554 NONOQ15233 471 aaKnown RBP eCLIP20■□□□□ 0.79
PTPN7-209ENST00000477554 UGCGQ16739 394 aa20■□□□□ 0.79
PTPN7-209ENST00000477554 GPR153Q6NV75 609 aa20■□□□□ 0.79
PTPN7-209ENST00000477554 SPRED2Q7Z698 418 aa20■□□□□ 0.79
PTPN7-209ENST00000477554 CCDC155Q8N6L0 562 aa20■□□□□ 0.79
PTPN7-209ENST00000477554 SLC5A5Q92911 643 aa20■□□□□ 0.79
PTPN7-209ENST00000477554 ZSCAN31Q96LW9 406 aaPredicted RBP20■□□□□ 0.79
PTPN7-209ENST00000477554 SEMA6BQ9H3T3 888 aa20■□□□□ 0.79
PTPN7-209ENST00000477554 UNC45AQ9H3U1 944 aa20■□□□□ 0.79
PTPN7-209ENST00000477554 NRCAMQ92823 1304 aa19.99■□□□□ 0.79
PTPN7-209ENST00000477554 CYP3A7-CYP3A51PA0A087WV96 503 aa19.99■□□□□ 0.79
PTPN7-209ENST00000477554 MBLAC1A4D2B0 266 aaPredicted RBP19.99■□□□□ 0.79
PTPN7-209ENST00000477554 CHRNA1P02708 482 aa19.99■□□□□ 0.79
PTPN7-209ENST00000477554 CYP3A7P24462 503 aa19.99■□□□□ 0.79
PTPN7-209ENST00000477554 LETM2Q2VYF4 491 aa19.99■□□□□ 0.79
PTPN7-209ENST00000477554 MCTP2Q6DN12 878 aa19.99■□□□□ 0.79
PTPN7-209ENST00000477554 ETNPPLQ8TBG4 499 aa19.99■□□□□ 0.79
PTPN7-209ENST00000477554 DNAJB3Q8WWF6 145 aa19.99■□□□□ 0.79
PTPN7-209ENST00000477554 MBOAT7Q96N66 472 aa19.99■□□□□ 0.79
PTPN7-209ENST00000477554 TUBE1Q9UJT0 475 aa19.99■□□□□ 0.79
PTPN7-209ENST00000477554 TRPC6Q9Y210 931 aa19.99■□□□□ 0.79
PTPN7-209ENST00000477554 RSPH10B2B2RC85 870 aa19.98■□□□□ 0.79
PTPN7-209ENST00000477554 BTBD18B2RXH4 712 aa19.98■□□□□ 0.79
PTPN7-209ENST00000477554 BACH1O14867 736 aa19.98■□□□□ 0.79
PTPN7-209ENST00000477554 RSPH10BP0C881 870 aa19.98■□□□□ 0.79
PTPN7-209ENST00000477554 RFC2P35250 354 aa19.98■□□□□ 0.79
PTPN7-209ENST00000477554 TMEM62Q0P6H9 643 aa19.98■□□□□ 0.79
PTPN7-209ENST00000477554 Q4G0T1 1027 aa19.98■□□□□ 0.79
PTPN7-209ENST00000477554 KRT40Q6A162 431 aa19.98■□□□□ 0.79
PTPN7-209ENST00000477554 PLPPR4Q7Z2D5 763 aa19.98■□□□□ 0.79
PTPN7-209ENST00000477554 FAM49AQ9H0Q0 323 aaPredicted RBP19.98■□□□□ 0.79
PTPN7-209ENST00000477554 NKX2-4Q9H2Z4 354 aa19.98■□□□□ 0.79
PTPN7-209ENST00000477554 AZI2Q9H6S1 392 aa19.98■□□□□ 0.79
PTPN7-209ENST00000477554 ZNF302Q9NR11 478 aa19.98■□□□□ 0.79
PTPN7-209ENST00000477554 SLC4A7Q9Y6M7 1214 aa19.98■□□□□ 0.79
PTPN7-209ENST00000477554 MYH9P35579 1960 aaKnown RBP19.97■□□□□ 0.79
PTPN7-209ENST00000477554 LOXHD1Q8IVV2 1947 aa19.97■□□□□ 0.79
PTPN7-209ENST00000477554 POTEB3A0JP26 581 aa19.97■□□□□ 0.79
PTPN7-209ENST00000477554 K7ELQ4 463 aaPredicted RBP19.97■□□□□ 0.79
PTPN7-209ENST00000477554 ZNF862O60290 1169 aa19.97■□□□□ 0.79
PTPN7-209ENST00000477554 PSMD10O75832 226 aa19.97■□□□□ 0.79
PTPN7-209ENST00000477554 GRIN2CQ14957 1233 aa19.97■□□□□ 0.79
PTPN7-209ENST00000477554 ZNF697Q5TEC3 545 aa19.97■□□□□ 0.79
PTPN7-209ENST00000477554 GALNT17Q6IS24 598 aa19.97■□□□□ 0.79
PTPN7-209ENST00000477554 POTEBQ6S5H4 581 aa19.97■□□□□ 0.79
PTPN7-209ENST00000477554 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms