RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 E7EVH7 732 aa12.02□□□□□ -0.48
COL27A1-204ENST00000477421 NOP56O00567 594 aaKnown RBP12.02□□□□□ -0.48
COL27A1-204ENST00000477421 CCT5P48643 541 aa12.02□□□□□ -0.48
COL27A1-204ENST00000477421 KNOP1Q1ED39 458 aaKnown RBP12.02□□□□□ -0.48
COL27A1-204ENST00000477421 CAPN12Q6ZSI9 719 aa12.02□□□□□ -0.48
COL27A1-204ENST00000477421 ANKRD35Q8N283 1001 aa12.02□□□□□ -0.48
COL27A1-204ENST00000477421 TTLL6Q8N841 843 aa12.02□□□□□ -0.48
COL27A1-204ENST00000477421 FAM71BQ8TC56 605 aa12.02□□□□□ -0.48
COL27A1-204ENST00000477421 CEP170P1Q96L14 293 aa12.02□□□□□ -0.48
COL27A1-204ENST00000477421 CRAMP1Q96RY5 1269 aa12.02□□□□□ -0.48
COL27A1-204ENST00000477421 FBXO28Q9NVF7 368 aa12.02□□□□□ -0.48
COL27A1-204ENST00000477421 PLEKHG2Q9H7P9 1386 aa12.02□□□□□ -0.49
COL27A1-204ENST00000477421 BUB1BO60566 1050 aaPredicted RBP12.02□□□□□ -0.49
COL27A1-204ENST00000477421 C7orf25Q9BPX7 421 aa12.02□□□□□ -0.49
COL27A1-204ENST00000477421 PLCD4Q9BRC7 762 aa12.02□□□□□ -0.49
COL27A1-204ENST00000477421 WDR11Q9BZH6 1224 aa12.02□□□□□ -0.49
COL27A1-204ENST00000477421 DDX4Q9NQI0 724 aaKnown RBP12.02□□□□□ -0.49
COL27A1-204ENST00000477421 FMN2Q9NZ56 1722 aa12.02□□□□□ -0.49
COL27A1-204ENST00000477421 IFNB1P01574 187 aa12.02□□□□□ -0.49
COL27A1-204ENST00000477421 GRB10Q13322 594 aa12.02□□□□□ -0.49
COL27A1-204ENST00000477421 TRIM65Q6PJ69 517 aa12.02□□□□□ -0.49
COL27A1-204ENST00000477421 MGARPQ8TDB4 240 aa12.02□□□□□ -0.49
COL27A1-204ENST00000477421 IPO4Q8TEX9 1081 aaKnown RBP12.02□□□□□ -0.49
COL27A1-204ENST00000477421 NAP1L3Q99457 506 aaPredicted RBP12.02□□□□□ -0.49
COL27A1-204ENST00000477421 EIF2AK1Q9BQI3 630 aaKnown RBP12.02□□□□□ -0.49
COL27A1-204ENST00000477421 SLC9A1P19634 815 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 LIG4P49917 911 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 EN1Q05925 392 aaPredicted RBP12.01□□□□□ -0.49
COL27A1-204ENST00000477421 GRM1Q13255 1194 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 TNFAIP1Q13829 316 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 ZC2HC1CQ53FD0 456 aaPredicted RBP12.01□□□□□ -0.49
COL27A1-204ENST00000477421 CDKAL1Q5VV42 579 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 ZNF365Q70YC5 407 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 DCAF4Q8WV16 495 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 OSBPL9Q96SU4 736 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 MED4Q9NPJ6 270 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 KBTBD4Q9NVX7 518 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 SEPT9Q9UHD8 586 aaPredicted RBP12.01□□□□□ -0.49
COL27A1-204ENST00000477421 STK24Q9Y6E0 443 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 DDTLA6NHG4 134 aaPredicted RBP12.01□□□□□ -0.49
COL27A1-204ENST00000477421 EIF3CLB5ME19 914 aaKnown RBP12.01□□□□□ -0.49
COL27A1-204ENST00000477421 IPO5O00410 1097 aaKnown RBP12.01□□□□□ -0.49
COL27A1-204ENST00000477421 ZSCAN20P17040 1043 aaPredicted RBP12.01□□□□□ -0.49
COL27A1-204ENST00000477421 ACTN2P35609 894 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 ECE1P42892 770 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 APBA1Q02410 837 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 AP3B2Q13367 1082 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 PDIA5Q14554 519 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 PRAMEF18Q5VWM3 479 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 TTI2Q6NXR4 508 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 DCUN1D2Q6PH85 259 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 GLYCTKQ8IVS8 523 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 EIF3CQ99613 913 aaKnown RBP12.01□□□□□ -0.49
COL27A1-204ENST00000477421 REEP2Q9BRK0 252 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 RASSF4Q9H2L5 321 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 DNAJC12Q9UKB3 198 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 KIF4AO95239 1232 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 PLTPP55058 493 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 ADCY1Q08828 1119 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 SPP2Q13103 211 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 DMP1Q13316 513 aaPredicted RBP12.01□□□□□ -0.49
COL27A1-204ENST00000477421 ZNF211Q13398 564 aaPredicted RBP12.01□□□□□ -0.49
COL27A1-204ENST00000477421 MCTP2Q6DN12 878 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 ZFPM1Q8IX07 1006 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 DEPTORQ8TB45 409 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 MAGOHBQ96A72 148 aaKnown RBP12.01□□□□□ -0.49
COL27A1-204ENST00000477421 LRRC1Q9BTT6 524 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 CAPS2Q9BXY5 557 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 ATP8A1Q9Y2Q0 1164 aa12.01□□□□□ -0.49
COL27A1-204ENST00000477421 CACNA1FO60840 1977 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 RXRBP28702 533 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 TRPC3Q13507 836 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 SNX1Q13596 522 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 CCDC93Q567U6 631 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 METTL13Q8N6R0 699 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 CEP72Q9P209 647 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 PCDHAC2Q9Y5I4 1007 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 RSPH10B2B2RC85 870 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 ATP8B1O43520 1251 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 ZBTB7AO95365 584 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 RSPH10BP0C881 870 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 MYBP10242 640 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 FERP16591 822 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 MKRN4PQ13434 485 aaPredicted RBP12□□□□□ -0.49
COL27A1-204ENST00000477421 IL17AQ16552 155 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 MTERF2Q49AM1 385 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 SEPT14Q6ZU15 432 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 CCDC121Q6ZUS5 278 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 GLIS3Q8NEA6 775 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 CYP2W1Q8TAV3 490 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 ACER1Q8TDN7 264 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 ZNF668Q96K58 619 aaPredicted RBP12□□□□□ -0.49
COL27A1-204ENST00000477421 DDX47Q9H0S4 455 aaKnown RBP12□□□□□ -0.49
COL27A1-204ENST00000477421 SLC16A4O15374 487 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 N4BP1O75113 896 aaKnown RBP12□□□□□ -0.49
COL27A1-204ENST00000477421 ABL1P00519 1130 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 ASNSP08243 561 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 GGCXP38435 758 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 MXI1P50539 228 aa12□□□□□ -0.49
COL27A1-204ENST00000477421 IRX5P78411 483 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms