RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 CTC1Q2NKJ3 1217 aa13.2□□□□□ -0.3
LSM2-212ENST00000477182 USH1GQ495M9 461 aa13.2□□□□□ -0.3
LSM2-212ENST00000477182 NSMFQ6X4W1 530 aa13.2□□□□□ -0.3
LSM2-212ENST00000477182 FBXO11Q86XK2 927 aa13.2□□□□□ -0.3
LSM2-212ENST00000477182 PPP1R13LQ8WUF5 828 aa13.2□□□□□ -0.3
LSM2-212ENST00000477182 MPHOSPH6Q99547 160 aaKnown RBP13.2□□□□□ -0.3
LSM2-212ENST00000477182 AMNQ9BXJ7 453 aa13.2□□□□□ -0.3
LSM2-212ENST00000477182 GJB4Q9NTQ9 266 aa13.2□□□□□ -0.3
LSM2-212ENST00000477182 VPS54Q9P1Q0 977 aa13.2□□□□□ -0.3
LSM2-212ENST00000477182 LCTP09848 1927 aa13.19□□□□□ -0.3
LSM2-212ENST00000477182 NLRC5Q86WI3 1866 aa13.19□□□□□ -0.3
LSM2-212ENST00000477182 ICAM1P05362 532 aa13.19□□□□□ -0.3
LSM2-212ENST00000477182 ALDH5A1P51649 535 aaPredicted RBP13.19□□□□□ -0.3
LSM2-212ENST00000477182 CHMP4BP1P59074 171 aa13.19□□□□□ -0.3
LSM2-212ENST00000477182 GUCY1B3Q02153 619 aa13.19□□□□□ -0.3
LSM2-212ENST00000477182 TYW1BQ6NUM6 668 aa13.19□□□□□ -0.3
LSM2-212ENST00000477182 TMEM192Q8IY95 271 aa13.19□□□□□ -0.3
LSM2-212ENST00000477182 SCFD2Q8WU76 684 aa13.19□□□□□ -0.3
LSM2-212ENST00000477182 C8orf76Q96K31 380 aa13.19□□□□□ -0.3
LSM2-212ENST00000477182 BARHL2Q9NY43 387 aa13.19□□□□□ -0.3
LSM2-212ENST00000477182 CCPG1Q9ULG6 757 aa13.19□□□□□ -0.3
LSM2-212ENST00000477182 PCDHA1Q9Y5I3 950 aa13.19□□□□□ -0.3
LSM2-212ENST00000477182 RALGAPA2Q2PPJ7 1873 aa13.19□□□□□ -0.3
LSM2-212ENST00000477182 EMSYQ7Z589 1322 aa13.18□□□□□ -0.3
LSM2-212ENST00000477182 MYH15Q9Y2K3 1946 aa13.18□□□□□ -0.3
LSM2-212ENST00000477182 MYO15AQ9UKN7 3530 aa13.18□□□□□ -0.3
LSM2-212ENST00000477182 hCG_1984214I3L0E3 225 aa13.18□□□□□ -0.3
LSM2-212ENST00000477182 ID4P47928 161 aa13.18□□□□□ -0.3
LSM2-212ENST00000477182 NAPAP54920 295 aa13.18□□□□□ -0.3
LSM2-212ENST00000477182 SIGLEC14Q08ET2 396 aa13.18□□□□□ -0.3
LSM2-212ENST00000477182 CLUL1Q15846 466 aa13.18□□□□□ -0.3
LSM2-212ENST00000477182 MUM1L1Q5H9M0 696 aa13.18□□□□□ -0.3
LSM2-212ENST00000477182 LARP1BQ659C4 914 aaKnown RBP13.18□□□□□ -0.3
LSM2-212ENST00000477182 GDF6Q6KF10 455 aaPredicted RBP13.18□□□□□ -0.3
LSM2-212ENST00000477182 MYOCDQ8IZQ8 938 aa13.18□□□□□ -0.3
LSM2-212ENST00000477182 ZNF713Q8N859 430 aaPredicted RBP13.18□□□□□ -0.3
LSM2-212ENST00000477182 CTAGE1Q96RT6 745 aa13.18□□□□□ -0.3
LSM2-212ENST00000477182 YME1L1Q96TA2 773 aa13.18□□□□□ -0.3
LSM2-212ENST00000477182 LMAN2LQ9H0V9 348 aa13.18□□□□□ -0.3
LSM2-212ENST00000477182 ALG13Q9NP73 1137 aaKnown RBP13.18□□□□□ -0.3
LSM2-212ENST00000477182 CD207Q9UJ71 328 aa13.18□□□□□ -0.3
LSM2-212ENST00000477182 KCNJ14Q9UNX9 436 aa13.18□□□□□ -0.3
LSM2-212ENST00000477182 FAM186AA6NE01 2351 aa13.18□□□□□ -0.3
LSM2-212ENST00000477182 PLXNA3P51805 1871 aa13.18□□□□□ -0.3
LSM2-212ENST00000477182 RIF1Q5UIP0 2472 aaKnown RBP13.18□□□□□ -0.3
LSM2-212ENST00000477182 LGR5O75473 907 aa13.17□□□□□ -0.3
LSM2-212ENST00000477182 XBP1P17861 261 aa13.17□□□□□ -0.3
LSM2-212ENST00000477182 PDCP20941 246 aa13.17□□□□□ -0.3
LSM2-212ENST00000477182 SYT1P21579 422 aa13.17□□□□□ -0.3
LSM2-212ENST00000477182 AVPR2P30518 371 aa13.17□□□□□ -0.3
LSM2-212ENST00000477182 TRIM29Q14134 588 aa13.17□□□□□ -0.3
LSM2-212ENST00000477182 TCTN1Q2MV58 587 aa13.17□□□□□ -0.3
LSM2-212ENST00000477182 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.17□□□□□ -0.3
LSM2-212ENST00000477182 DHX38Q92620 1227 aaKnown RBP13.17□□□□□ -0.3
LSM2-212ENST00000477182 SH3GLB2Q9NR46 395 aa13.17□□□□□ -0.3
LSM2-212ENST00000477182 COL4A6Q14031 1691 aa13.17□□□□□ -0.3
LSM2-212ENST00000477182 MYO7AQ13402 2215 aa13.17□□□□□ -0.3
LSM2-212ENST00000477182 DCHS1Q96JQ0 3298 aa13.17□□□□□ -0.3
LSM2-212ENST00000477182 ABCB11O95342 1321 aa13.16□□□□□ -0.3
LSM2-212ENST00000477182 VPS37CA5D8V6 355 aaPredicted RBP13.16□□□□□ -0.3
LSM2-212ENST00000477182 B4DLN1 442 aa13.16□□□□□ -0.3
LSM2-212ENST00000477182 H3BQV1 296 aa13.16□□□□□ -0.3
LSM2-212ENST00000477182 TXNP10599 105 aaKnown RBP13.16□□□□□ -0.3
LSM2-212ENST00000477182 MRPL12P52815 198 aaKnown RBP13.16□□□□□ -0.3
LSM2-212ENST00000477182 NLRP5P59047 1200 aa13.16□□□□□ -0.3
LSM2-212ENST00000477182 PDE4DQ08499 809 aa13.16□□□□□ -0.3
LSM2-212ENST00000477182 TRAF1Q13077 416 aa13.16□□□□□ -0.3
LSM2-212ENST00000477182 PTK7Q13308 1070 aa13.16□□□□□ -0.3
LSM2-212ENST00000477182 BAATQ14032 418 aaPredicted RBP13.16□□□□□ -0.3
LSM2-212ENST00000477182 PPP1R18Q6NYC8 613 aa13.16□□□□□ -0.3
LSM2-212ENST00000477182 CCDC148Q8NFR7 591 aa13.16□□□□□ -0.3
LSM2-212ENST00000477182 FBXO18Q8NFZ0 1043 aa13.16□□□□□ -0.3
LSM2-212ENST00000477182 CCDC12Q8WUD4 166 aaPredicted RBP13.16□□□□□ -0.3
LSM2-212ENST00000477182 PURBQ96QR8 312 aaKnown RBP13.16□□□□□ -0.3
LSM2-212ENST00000477182 GTF2IRD1Q9UHL9 959 aa13.16□□□□□ -0.3
LSM2-212ENST00000477182 PNMA2Q9UL42 364 aa13.16□□□□□ -0.3
LSM2-212ENST00000477182 TRPC6Q9Y210 931 aa13.16□□□□□ -0.3
LSM2-212ENST00000477182 MRPL11Q9Y3B7 192 aaKnown RBP13.16□□□□□ -0.3
LSM2-212ENST00000477182 MYH7BA7E2Y1 1941 aa13.15□□□□□ -0.3
LSM2-212ENST00000477182 PRR23AA6NEV1 266 aa13.15□□□□□ -0.3
LSM2-212ENST00000477182 SMCO2A6NFE2 343 aa13.15□□□□□ -0.3
LSM2-212ENST00000477182 LOC730098B7Z3J9 87 aa13.15□□□□□ -0.3
LSM2-212ENST00000477182 H0Y858 1186 aa13.15□□□□□ -0.3
LSM2-212ENST00000477182 STX6O43752 255 aa13.15□□□□□ -0.3
LSM2-212ENST00000477182 RB1P06400 928 aa13.15□□□□□ -0.3
LSM2-212ENST00000477182 DDIT3P35638 169 aa13.15□□□□□ -0.3
LSM2-212ENST00000477182 VCPP55072 806 aaKnown RBP13.15□□□□□ -0.3
LSM2-212ENST00000477182 DLX2Q07687 328 aaPredicted RBP13.15□□□□□ -0.3
LSM2-212ENST00000477182 HYAL1Q12794 435 aa13.15□□□□□ -0.3
LSM2-212ENST00000477182 ASCL5Q7RTU5 278 aa13.15□□□□□ -0.3
LSM2-212ENST00000477182 C7orf31Q8N865 590 aa13.15□□□□□ -0.3
LSM2-212ENST00000477182 C11orf84Q9BUA3 381 aaPredicted RBP13.15□□□□□ -0.3
LSM2-212ENST00000477182 PHF20Q9BVI0 1012 aa13.15□□□□□ -0.3
LSM2-212ENST00000477182 TLR9Q9NR96 1032 aa13.15□□□□□ -0.3
LSM2-212ENST00000477182 RWDD3Q9Y3V2 267 aa13.15□□□□□ -0.3
LSM2-212ENST00000477182 ESYT2A0FGR8 921 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 NFIBO00712 420 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 OPLAHO14841 1288 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 ADAMTS3O15072 1205 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 EYA4O95677 639 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms